Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_A17
(905 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 110 8e-24
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 110 8e-24
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 110 8e-24
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 110 8e-24
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 110 8e-24
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 110 8e-24
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 110 8e-24
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 108 2e-23
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 108 3e-23
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 103 1e-21
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 101 4e-21
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 69 3e-11
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 7.6
U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear o... 31 7.6
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 7.6
D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein. 31 7.6
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 7.6
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 7.6
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 7.6
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 7.6
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 7.6
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 7.6
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 110 bits (264), Expect = 8e-24
Identities = 50/81 (61%), Positives = 59/81 (72%)
Frame = +3
Query: 150 VKAVXCTNCARCVPKXKAIKKFXXXXXXXXXXXXXINDASVYPMFQLPKLYAKLHYCVSC 329
V+ + CTNCARCVPK KAIKKF I++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 330 AIHSKVVRNRSKKDRRIRTPP 392
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 110 bits (264), Expect = 8e-24
Identities = 50/81 (61%), Positives = 59/81 (72%)
Frame = +3
Query: 150 VKAVXCTNCARCVPKXKAIKKFXXXXXXXXXXXXXINDASVYPMFQLPKLYAKLHYCVSC 329
V+ + CTNCARCVPK KAIKKF I++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 330 AIHSKVVRNRSKKDRRIRTPP 392
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 110 bits (264), Expect = 8e-24
Identities = 50/81 (61%), Positives = 59/81 (72%)
Frame = +3
Query: 150 VKAVXCTNCARCVPKXKAIKKFXXXXXXXXXXXXXINDASVYPMFQLPKLYAKLHYCVSC 329
V+ + CTNCARCVPK KAIKKF I++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 330 AIHSKVVRNRSKKDRRIRTPP 392
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 110 bits (264), Expect = 8e-24
Identities = 50/81 (61%), Positives = 59/81 (72%)
Frame = +3
Query: 150 VKAVXCTNCARCVPKXKAIKKFXXXXXXXXXXXXXINDASVYPMFQLPKLYAKLHYCVSC 329
V+ + CTNCARCVPK KAIKKF I++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 330 AIHSKVVRNRSKKDRRIRTPP 392
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 110 bits (264), Expect = 8e-24
Identities = 50/81 (61%), Positives = 59/81 (72%)
Frame = +3
Query: 150 VKAVXCTNCARCVPKXKAIKKFXXXXXXXXXXXXXINDASVYPMFQLPKLYAKLHYCVSC 329
V+ + CTNCARCVPK KAIKKF I++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 330 AIHSKVVRNRSKKDRRIRTPP 392
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 110 bits (264), Expect = 8e-24
Identities = 50/81 (61%), Positives = 59/81 (72%)
Frame = +3
Query: 150 VKAVXCTNCARCVPKXKAIKKFXXXXXXXXXXXXXINDASVYPMFQLPKLYAKLHYCVSC 329
V+ + CTNCARCVPK KAIKKF I++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 330 AIHSKVVRNRSKKDRRIRTPP 392
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 110 bits (264), Expect = 8e-24
Identities = 50/81 (61%), Positives = 59/81 (72%)
Frame = +3
Query: 150 VKAVXCTNCARCVPKXKAIKKFXXXXXXXXXXXXXINDASVYPMFQLPKLYAKLHYCVSC 329
V+ + CTNCARCVPK KAIKKF I++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 330 AIHSKVVRNRSKKDRRIRTPP 392
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 108 bits (260), Expect = 2e-23
Identities = 49/81 (60%), Positives = 58/81 (71%)
Frame = +3
Query: 150 VKAVXCTNCARCVPKXKAIKKFXXXXXXXXXXXXXINDASVYPMFQLPKLYAKLHYCVSC 329
V+ + CTNCARCVPK KAIKKF I++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 330 AIHSKVVRNRSKKDRRIRTPP 392
IHSKVVRNRS++ R+ RTPP
Sbjct: 78 VIHSKVVRNRSREARKDRTPP 98
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 108 bits (259), Expect = 3e-23
Identities = 49/81 (60%), Positives = 58/81 (71%)
Frame = +3
Query: 150 VKAVXCTNCARCVPKXKAIKKFXXXXXXXXXXXXXINDASVYPMFQLPKLYAKLHYCVSC 329
V+ + CTNCARCVPK AIKKF I++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 330 AIHSKVVRNRSKKDRRIRTPP 392
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 103 bits (246), Expect = 1e-21
Identities = 47/81 (58%), Positives = 56/81 (69%)
Frame = +3
Query: 150 VKAVXCTNCARCVPKXKAIKKFXXXXXXXXXXXXXINDASVYPMFQLPKLYAKLHYCVSC 329
V+ + CTNCARCVPK AIKKF I++ASV+ + LPKL KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLCVKLHYCVSC 77
Query: 330 AIHSKVVRNRSKKDRRIRTPP 392
IHSKVVRNRS++ R+ RTPP
Sbjct: 78 VIHSKVVRNRSREARKDRTPP 98
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 101 bits (242), Expect = 4e-21
Identities = 46/81 (56%), Positives = 55/81 (67%)
Frame = +3
Query: 150 VKAVXCTNCARCVPKXKAIKKFXXXXXXXXXXXXXINDASVYPMFQLPKLYAKLHYCVSC 329
V+ + CTNC RCVP KAIKKF I++ SV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYCVSC 77
Query: 330 AIHSKVVRNRSKKDRRIRTPP 392
AIHSKVVRNRS++ + RTPP
Sbjct: 78 AIHSKVVRNRSREACKDRTPP 98
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 68.5 bits (160), Expect = 3e-11
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +3
Query: 282 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 392
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 37
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear
orphan receptor protein.
Length = 587
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 307 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 350
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 404 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 447
>D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein.
Length = 143
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 46 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 89
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,330,300
Number of Sequences: 237096
Number of extensions: 1378191
Number of successful extensions: 2470
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2470
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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