Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_A16
(882 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 29 0.88
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 1.2
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 29 1.2
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 2.7
SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 27 4.7
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 26 6.2
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 6.2
SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyce... 26 8.2
SPAC23H4.11c |cnl2||centromere localized protein Cnl2|Schizosacc... 26 8.2
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 29.1 bits (62), Expect = 0.88
Identities = 17/69 (24%), Positives = 38/69 (55%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
K+++ LE S Q +E E + P+V++ +EK ++ V+ +E +K+S N+
Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKE-----EKISRNL 185
Query: 560 QETNEKLAP 586
+ ++ ++P
Sbjct: 186 RSSSRSISP 194
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/65 (21%), Positives = 30/65 (46%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
KA + LE+ ++ E + EE+ H + T + + + +QE ++ K +
Sbjct: 353 KACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEKIIQEKSRVDKMIDEYR 412
Query: 560 QETNE 574
Q+ +E
Sbjct: 413 QKLSE 417
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 362 LGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATXLREKLQAAVQNTVQESQK 532
+ +A KA+++LEQ+ + E L K H + E+ +EKL A ++ + S++
Sbjct: 52 INEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEE 111
Query: 533 L 535
L
Sbjct: 112 L 112
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/73 (23%), Positives = 38/73 (52%)
Frame = +2
Query: 395 LEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETNE 574
++ Q+IE T L K D+E++ +++ + V + Q+ ++++ +Q+T E
Sbjct: 496 MKTQEQSIELT--RLYKQLQDIEEDYENKLMRMEQQWREDVDQLQEYVEEITQELQDTKE 553
Query: 575 KLAPKIKAAYDDF 613
L+ K + DD+
Sbjct: 554 VLSKSSKES-DDY 565
>SPAC222.15 |meu13|SPAC821.01|Tat binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 479 LREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKK 622
+REK+Q+ + + S KL + V++ +++ K Y DFAKK
Sbjct: 129 IREKIQSIDKEIEETSSKLESLRNGTVKQISKEAMQKTDKNY-DFAKK 175
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQ 529
KAKE ++ R +RTA E+RK +E+ R + A Q + Q
Sbjct: 164 KAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRAERAAEAQRVAGKEQ 213
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 395 LEQSRQNIERTAEELRKAHPDVEK 466
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 512
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = +2
Query: 542 KVSSNVQET--NEKLAPKIKAAYD 607
+V N++ET EK A K+KA+YD
Sbjct: 299 EVDLNIEETVLKEKYADKVKASYD 322
>SPAC23H4.11c |cnl2||centromere localized protein
Cnl2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 8.2
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +2
Query: 386 KEALEQSRQNIERTAEELRKAHPD--VEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
++ L + R NI ++ + K+ D + N L+ A+ + V+E ++
Sbjct: 53 QKRLAKLRANIHLESQVIGKSRIDRMLATNVEKLQTVSHASTLHDVEEFYTSHSAKPLDI 112
Query: 560 QETNEKLAPKIKAAY 604
E NE+L+ +++AY
Sbjct: 113 SEINERLSEAVQSAY 127
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,968,517
Number of Sequences: 5004
Number of extensions: 25349
Number of successful extensions: 115
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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