Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_A16
(882 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 35 0.075
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 34 0.17
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 32 0.70
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 31 1.2
04_01_0180 + 2034021-2034023,2034741-2035088 31 1.6
01_06_0678 - 31114259-31114321,31114508-31114552,31114644-311147... 30 2.1
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 30 2.8
08_02_0776 - 21083181-21083187,21083256-21083683,21083800-210840... 29 6.5
02_04_0315 - 21969416-21970756 29 6.5
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 28 8.6
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 28 8.6
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 28 8.6
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 35.1 bits (77), Expect = 0.075
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKV 547
DA G+ EA+E + E+L A+PDV+ L E L+ A + ++++ L
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRSRKAKSL---- 692
Query: 548 SSNVQETNEKLAPKIKAAYD 607
N+ ETN K A YD
Sbjct: 693 -ENLLETNPYTVTKRVAKYD 711
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +2
Query: 359 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLA 538
A+ DA G+ ++A+E ++ E+L A+PDVE L E L+ A ++ ++ + L
Sbjct: 515 AIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEAGRSRNRKQKSLE 574
Query: 539 KKVSSNVQETNE 574
+N Q +
Sbjct: 575 NLFVTNSQRVKK 586
>02_02_0331 +
9017291-9019084,9019205-9019402,9020014-9020184,
9020292-9020435,9020552-9020764,9020859-9021929,
9022365-9022391
Length = 1205
Score = 31.9 bits (69), Expect = 0.70
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 386 KEALEQSRQNIERTAEELR-KAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQ 562
K+ +QS ERT E + KAH ++ K E +QAA +QE Q VQ
Sbjct: 416 KQDAKQSDPKKERTVSEAKEKAHDEMNKGRAYGNETVQAASVKQMQEEQFPMSLADQKVQ 475
Query: 563 ET 568
T
Sbjct: 476 AT 477
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Frame = +2
Query: 377 GKAKEALEQSRQNIERTAEELRKAHPDV---------EKNATXLR-EKLQAAVQNTVQES 526
G E Q N++ E L A D+ EKNA L+ ++L+A ++N E
Sbjct: 795 GNKLEEQNQQISNLQEAVENLEAAKTDMYNELTVCQEEKNAALLQVQQLEANLKNLESEL 854
Query: 527 QKLAKKVSSNVQETNEKLAPKIKA 598
++ +VS+ +++ NE+L KI +
Sbjct: 855 EQKQSQVSA-LEQANEELREKISS 877
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +2
Query: 389 EALEQSRQNIERTAEELRKAHPDVEKNATXLREK---LQAAVQN 511
EALE+ QN+ R EE +K H +++K L K L AA +N
Sbjct: 52 EALERQVQNLTRYKEEKQKQHANLQKEFAELERKYRDLDAAHRN 95
>01_06_0678 -
31114259-31114321,31114508-31114552,31114644-31114742,
31114827-31114872,31115026-31115102,31115385-31115432,
31120640-31120708,31120848-31120853,31120955-31121032,
31121246-31121344,31121427-31121489,31122642-31122713,
31122800-31122874,31122965-31123021,31123983-31124186,
31124317-31124394,31124485-31124547,31124646-31125284,
31125367-31125416,31125496-31125576,31125896-31125923
Length = 679
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 389 EALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQ-AAVQ--NTVQESQKLAKKVSSNV 559
+AL + +ER AEE R AH + A +L+ AV+ N + Q+ A + SS
Sbjct: 400 QALREELATVERRAEEERIAHNATKMAAVEREVELEHRAVEASNALARIQRAADQSSSRA 459
Query: 560 QETNEKLA 583
E K+A
Sbjct: 460 MELEHKVA 467
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +2
Query: 485 EKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKK 622
EKLQ + + QE+Q+L KK+SS V E +++ ++ + + A++
Sbjct: 153 EKLQKEISSLSQENQELKKKISS-VLENSDRAESEVASLKEALAQQ 197
>08_02_0776 -
21083181-21083187,21083256-21083683,21083800-21084048,
21084172-21084248,21084351-21084483
Length = 297
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 365 GDANGKAKEAL-EQSRQNIERTAEELRKAHPDVE-KNATXLREKLQAA-VQNTVQESQKL 535
GD++G AKE L + SR ++ E RK +E K LR + Q +Q+ ++ +Q++
Sbjct: 120 GDSDGDAKEGLRDSSRSMVQMQREVQRKLQEQIEVKRHLQLRMEAQGRYLQSVLRRAQQV 179
>02_04_0315 - 21969416-21970756
Length = 446
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKL---A 538
D NG + ALE++ + + E L A + K + EK ++A++ QE++ L
Sbjct: 246 DENGSLRRALERAVEEVNAANESLELATGENSKLQDAVAEK-ESAMEALRQENESLKASE 304
Query: 539 KKVSSNVQETNEKLAPKIKAA 601
+ +E + +LA KAA
Sbjct: 305 AEARGRAKELDGQLAAARKAA 325
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +2
Query: 362 LGDAN-GKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLA 538
L D N G+A AL ++E EEL K D++ L K + V + LA
Sbjct: 195 LSDPNAGEASGALVSKDDDLEAVREELIKGFLDIDNGGRKLGIKEMGQLNEKVFQIACLA 254
Query: 539 KKVSSNVQETNEKL 580
K V E + +L
Sbjct: 255 KLPPEEVGEASYEL 268
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +2
Query: 434 ELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDF 613
+L++ D+EKN REK+Q + Q T++E + + K + QE E K + +F
Sbjct: 335 QLQENVADLEKNLASEREKIQHSSQ-TLKEMESVYNKHAKR-QEDLENNMKSCKDQFKEF 392
Query: 614 AKK 622
+K
Sbjct: 393 ERK 395
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +2
Query: 365 GDANGKAKEALEQS---RQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKL 535
GD + K + L ++ ++ +E + L H + + A +++ A ++ VQE
Sbjct: 754 GDDHSKTRSLLSEAQLHKEELELNLKSLNDLHVESKTAAESALQRI-AELETQVQELSAA 812
Query: 536 AKKVSSNVQETNEKLAPKIKAAYD 607
+ + S++ E KLA K + D
Sbjct: 813 EQSLKSHLTEFESKLASAEKKSMD 836
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,066,993
Number of Sequences: 37544
Number of extensions: 197883
Number of successful extensions: 811
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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