Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_A16
(882 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 38 0.014
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.043
SB_25538| Best HMM Match : Kinesin (HMM E-Value=0) 35 0.10
SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 31 0.93
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 31 0.93
SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 31 1.6
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 31 1.6
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 30 2.2
SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_25881| Best HMM Match : SNARE (HMM E-Value=9.8) 30 2.9
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 30 2.9
SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 29 3.8
SB_26887| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 29 5.0
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 29 5.0
SB_45073| Best HMM Match : ERM (HMM E-Value=0) 29 5.0
SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_1745| Best HMM Match : LexA_DNA_bind (HMM E-Value=1.9) 29 5.0
SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37) 29 6.6
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 29 6.6
SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019) 29 6.6
SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 28 8.7
SB_2197| Best HMM Match : Uso1_p115_C (HMM E-Value=7) 28 8.7
SB_25422| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 37.5 bits (83), Expect = 0.014
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNT--VQESQKLAKKVSS 553
KAKEAL + + ++ T E+L+ AH + + L+ K +N + ++L K+
Sbjct: 1829 KAKEALSKENKELKGTVEQLQDAHEKLSEENRLLKRKENEQSENVDDFESGEELQLKI-K 1887
Query: 554 NVQETNEKLAPKIKAA 601
+ E NE L+ +++ A
Sbjct: 1888 ELNEKNESLSSQLREA 1903
Score = 31.5 bits (68), Expect = 0.93
Identities = 19/73 (26%), Positives = 40/73 (54%)
Frame = +2
Query: 362 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAK 541
L + N K K+ALE+ R+ ++ +E ++ D+E+ L ++ + +E+++L K
Sbjct: 1961 LAEQNEKLKDALEELREAVQHLWDEKKEKERDIEQ----LNSQISSGDVQGYEETEEL-K 2015
Query: 542 KVSSNVQETNEKL 580
S +++ N KL
Sbjct: 2016 AQLSQLRDQNNKL 2028
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 35.9 bits (79), Expect = 0.043
Identities = 20/73 (27%), Positives = 40/73 (54%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
KAKE ++Q E ++ + EK+ LREK+Q+ + ++ S+KL + + +
Sbjct: 1614 KAKEKIKQGSARQEEQTKKYKAYQEKREKDVAELREKVQSLEKELMETSEKLREDLRGS- 1672
Query: 560 QETNEKLAPKIKA 598
++ E+L K++A
Sbjct: 1673 EKREEELKLKLEA 1685
>SB_25538| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 711
Score = 34.7 bits (76), Expect = 0.10
Identities = 22/78 (28%), Positives = 40/78 (51%)
Frame = +2
Query: 386 KEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQE 565
+E+L+ SR + ER ++ + E + T ++E LQA + V QKL + + N +
Sbjct: 367 EESLKASRSDNERLQTQINSIQAESETSKTEVKEVLQALEELAVNYDQKLQEVDAKN--K 424
Query: 566 TNEKLAPKIKAAYDDFAK 619
N+KL +I + +K
Sbjct: 425 ENDKLNDEITTKQVELSK 442
>SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/76 (18%), Positives = 43/76 (56%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
+ K+ +++++++++ T +E+ + V++ ++E + VQE++K ++ + V
Sbjct: 201 ETKKEVQETKKDVQETKKEVHETKTKVDETKREVQE-----TKKDVQETKKEVQETKTKV 255
Query: 560 QETNEKLAPKIKAAYD 607
ETN+++ K ++
Sbjct: 256 DETNKEVQETKKEVHE 271
>SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 31.5 bits (68), Expect = 0.93
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +2
Query: 362 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAK 541
L +A+ + +++ Q + + + K PD++ N L+ AVQ + SQ+L +
Sbjct: 298 LREAHANLESVIQKQTQR-KSEIKSIEKELPDLKNNLKKAEADLEKAVQGEAKSSQEL-R 355
Query: 542 KVSSNVQETNEKL 580
+ S V+E L
Sbjct: 356 SIRSKVEEARSSL 368
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 31.5 bits (68), Expect = 0.93
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 395 LEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKK--VSSNVQET 568
L Q R+N E + L+ +EK LR++L V Q + +L K + +V E
Sbjct: 103 LTQERENYETREKTLQSKITSIEKENNSLRDELNKTVSELTQTTAELQDKQTMLESVHER 162
Query: 569 NEKLAPKIK 595
N L +++
Sbjct: 163 NSDLERRLQ 171
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 31.5 bits (68), Expect = 0.93
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +2
Query: 395 LEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETNE 574
L++ IE+ ++L A EKN L E +A+QNT+Q + + E
Sbjct: 253 LQEYTDEIEKLKKDLFAAR---EKNGIFLSEDSYSAMQNTIQSQTSRITHFETRLPEMEA 309
Query: 575 KLAPKIKAAYDDFAK 619
A KI+A + K
Sbjct: 310 DFAAKIEAMEAELQK 324
>SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +2
Query: 374 NGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQ----ESQKLAK 541
N K +EAL+++ E+ AE + + ++++ + L +++ ++N ++ E QKL +
Sbjct: 154 NAKLEEALKRA---CEKHAEHMEQLDDELDQQMSRLEMRIKKELENKIKKKEPEEQKLKE 210
Query: 542 KVSSNVQE 565
++ VQE
Sbjct: 211 EIEEKVQE 218
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNT-VQESQKLAK---KV 547
+ ++ L++S Q ++ E L K+ ++N + R+ L+ VQ+T +S KL K+
Sbjct: 3488 RTQDLLDKSEQELKAAEENLVKSF---QENESLKRQMLK--VQSTSCADSVKLQADIGKL 3542
Query: 548 SSNVQETNEKLAPKIKAAYDDFAK 619
+ +Q T + L+ KIK D FAK
Sbjct: 3543 KTELQSTKKDLSDKIKEYNDLFAK 3566
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +2
Query: 380 KAKEALEQSRQN-IERTAEE---LRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKV 547
+A++ALE++ IE EE LR DV + A EKL Q TVQ+ + + +
Sbjct: 704 QARQALEETMHTTIEELHEEVETLRSRLQDVGQ-AKLEAEKLVQDTQATVQQQSEEVRSL 762
Query: 548 SSNVQETNEKLA 583
SS++ N +LA
Sbjct: 763 SSDIDRLNLQLA 774
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/65 (23%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Frame = +2
Query: 395 LEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNT---VQESQKLAKKVSSNVQE 565
+ ++++ ++ T +++++ +V++ T + E + VQ T VQE++K ++ + V E
Sbjct: 1293 VNETKKEVQETKKDVQETKKEVDETKTKVDET-KKEVQETKKDVQETKKEVQETKTKVDE 1351
Query: 566 TNEKL 580
TN+++
Sbjct: 1352 TNKEV 1356
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +2
Query: 350 SXXALGDANGKAKEALEQSRQNIERTAEE---LRKAHPDVEKNATXLREKLQAAVQNTVQ 520
S L ++ AK+ L+ +++ + E LRK H D ++ L++ + +
Sbjct: 586 SCKELKESLSLAKKELDSAKKESAARSNEVNLLRKKHEDEKRRLIGLKDGGDKELNRLKE 645
Query: 521 ESQKLAKKVSSNVQETNE 574
E +++KKVSS V E ++
Sbjct: 646 ELTQVSKKVSSAVSEMSD 663
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Frame = +2
Query: 374 NGKAKEAL---EQSRQNIERTAEELRKAHPDVEK------NATXLREKLQAAVQNTVQES 526
NGKA E + E+ IE E++RKA+ ++EK + + +L + ++N + E
Sbjct: 1930 NGKATEMVKKNEEKNNEIEEMREKMRKANEEIEKILSKNSKLSDILNELNSGIENILNEE 1989
Query: 527 QKLAKKVSSNVQETNEK 577
+ +Q+ EK
Sbjct: 1990 TLSDSDPNVKLQKLREK 2006
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKV 547
D K + +E+ +Q+ +E VE+N +EK AVQN + E ++A
Sbjct: 552 DKQEKENKQVEEEQQDEPVKQDEQENRDEPVEQNEQEKQEKALDAVQNIINEELRMAAAE 611
Query: 548 SSNVQETNEK 577
+ N+K
Sbjct: 612 ERKKEIENKK 621
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Frame = +2
Query: 392 ALEQSRQNIERTAEELR-KAHPDVEKNAT------XLREKLQAAVQNTVQESQKLAKKVS 550
A+ ++ QNIER EEL K E+++T + +KLQ A ++ VQE +++
Sbjct: 280 AVNETAQNIEREREELELKLRGSEEEDSTVQGMIKIIEDKLQ-ATESMVQEQSGERERLE 338
Query: 551 SNVQETNEKLA 583
++ E E+L+
Sbjct: 339 GHLAEITEELS 349
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQN 511
K K ++ + + E+ AEE +KA D + L+EKL AA+++
Sbjct: 350 KEKAGNKELKNSEEQKAEEEKKAKRDANDHVNQLQEKLGAAMRD 393
>SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1553
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/71 (21%), Positives = 33/71 (46%)
Frame = +2
Query: 398 EQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETNEK 577
+++ +E + +R+ H + + L K+QA +T E + LA++V +
Sbjct: 1395 DETISQLENDLKSVRQLHNETVEEKGKLEAKIQAYKISTQSEHEVLAEEVYTRYSSRTRA 1454
Query: 578 LAPKIKAAYDD 610
+I+ Y+D
Sbjct: 1455 SIERIRQQYED 1465
>SB_25881| Best HMM Match : SNARE (HMM E-Value=9.8)
Length = 251
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = +2
Query: 419 ERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQE 565
+RT EE+R+ D+++ +RE + + +N Q+ ++E
Sbjct: 172 KRTVEEIRRLDSDIQQRVVKIREDIATSGENIQQQMDSTRDATRKQIEE 220
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 29.9 bits (64), Expect = 2.9
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEE----------LRKAHPDVEKNATXLREKLQAAVQNTVQESQ 529
K +E +Q +NIE+ EE L+KA VE T L + LQ QN V
Sbjct: 954 KVEEEGKQKDKNIEQLNEELQQQDEAIAKLQKAKKQVEDERTELEDHLQEE-QNKVSHLT 1012
Query: 530 KLAKKVSSNVQETNEKL 580
K K+ S + E N L
Sbjct: 1013 KTKLKLESTLDEVNLNL 1029
>SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1312
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +2
Query: 359 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQ---AAVQNTVQESQ 529
AL D N K +EA EQS ++ EL+ +E+ R+KLQ A + ++E++
Sbjct: 904 ALNDLNVKKEEA-EQSSRSAADVISELQAHKQVLEQEILSNRKKLQMEAVAAKQALEETK 962
Query: 530 KLAKKVSSNVQETNEKLAPKIK 595
++ S +++ +K+ ++
Sbjct: 963 LNQIRIMSELEKEKKKMQEDVE 984
>SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 599
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +2
Query: 377 GKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSN 556
G ++ EQ R+ ER +E RK E+ +EK + + +E +K KK
Sbjct: 28 GGKRDEREQEREKKERRKKE-RKKERKKERKKERKKEKKKERKKERKEERKKERKKAEKK 86
Query: 557 VQETNEKL 580
++NE +
Sbjct: 87 FTDSNESV 94
>SB_26887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 374 NGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLA-KKVS 550
+ +A+ LE S +NI ++ K P + A L K + A ++ ++SQ +A KK
Sbjct: 123 SAQAENELEVS-ENIPPQSQHEPKKEPKINSQAEGLHVKEKEA-EHIPEQSQTVALKKAE 180
Query: 551 SNVQETNEKL 580
+ QET EKL
Sbjct: 181 MHRQETVEKL 190
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 410 QNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLA 538
++I+ EL K + D+E+ T LRE L++ V++ + ++LA
Sbjct: 1407 ESIQAEKSELGKRNWDLEEIVTNLREDLESLVKHRAELEEQLA 1449
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = +2
Query: 410 QNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPK 589
+ ++ +E+RK+ VEK + KL+ + + + S+K +K + + E +E + P
Sbjct: 11 KEVKDEEKEIRKSKEKVEKKTK--KRKLKESAEEQPEVSKK-KRKTAKDESEFDEGVEPS 67
Query: 590 IKAAYDDFAK 619
+ DF+K
Sbjct: 68 VAQREGDFSK 77
>SB_45073| Best HMM Match : ERM (HMM E-Value=0)
Length = 504
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 386 KEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQE 565
KE + +++ R EEL K +E+N RE L+ VQ E+Q+L ++ + E
Sbjct: 328 KEEMRAAQEEERRIKEELEKERKLIEQN----RELLEKRVQEQEAETQRLQEEFERALDE 383
>SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +2
Query: 404 SRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLA 583
S +N ER E+ R A E LREK + Q VQE + ++ + +E E+
Sbjct: 211 SPENQEREREKARIALE--ENKLKRLREKRREEEQRAVQEIHERIRREEESEEEEEEEEE 268
Query: 584 PKIKAAYDDFAKK 622
++ DD +K
Sbjct: 269 EELVPLSDDMEQK 281
>SB_1745| Best HMM Match : LexA_DNA_bind (HMM E-Value=1.9)
Length = 398
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
K KE LEQ RQN + E + ++ ++E L + +++ +KL K+ + N
Sbjct: 129 KQKELLEQERQNRIKMYRERILTNNKSDETLVQVQEDL-LKLFGKIKKDKKLLKETTHNE 187
Query: 560 QETNEKL 580
QE + L
Sbjct: 188 QEDRKAL 194
>SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37)
Length = 341
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/76 (18%), Positives = 33/76 (43%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
+ +E + ++ E+ + ++E+ +K + + SQKL ++ +
Sbjct: 139 RIREKRRKEKEEFEKQRKLKEDKQKEIEEKINEWIDKKNKEILKSKTSSQKLQEQKQAEK 198
Query: 560 QETNEKLAPKIKAAYD 607
+E N + K K A+D
Sbjct: 199 EEQNRTIEEKSKIAFD 214
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Frame = +2
Query: 362 LGDANGKAKEALEQSRQNIERTAEELRK-AHPDVEKNATXLREKLQAAVQNTVQESQKLA 538
LGD + + + + ++ +EL+K VEK A L+EK Q + V + ++
Sbjct: 528 LGDVEMQVQAFKAEKEKEVKFIEDELKKQCKALVEKKAKELKEKYQGELNEKVNKVERTL 587
Query: 539 KKV--------SSNVQETNEKLAPKIKA 598
+K S ++ETN L K ++
Sbjct: 588 RKQYEEDIVKGRSELEETNRTLKEKYES 615
>SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019)
Length = 1136
Score = 28.7 bits (61), Expect = 6.6
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = +2
Query: 362 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVE----KNATXLRE---KLQAAVQNTVQ 520
L D +EAL S+ E+T +L A + E K + E K+ +QN +
Sbjct: 409 LEDVLANKEEALRNSQDAHEQTVAKLSSAIKERETSWKKQKAEIEEHYNKIINDLQNRTK 468
Query: 521 ESQKLAKKVSSNVQET 568
++Q LA K VQET
Sbjct: 469 KTQNLADKAWEKVQET 484
>SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +2
Query: 344 RVSXXALGDANGKAKEALEQSRQNIERTAEELRK-AHPDVEKNATXLREKLQAAVQNTV 517
RV G GK KE +Q + +L K A D+EK L EK+ A + V
Sbjct: 287 RVKGVLTGACRGKEKEIQDQELGTKDERDYQLEKRASDDLEKRLKKLEEKIDALFKGGV 345
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Frame = +2
Query: 380 KAKEALEQSRQN-------IERTAEELRKAHPDVEKNATXLREKLQAA 502
+AK LEQ+R+ +E T LRK +EK T +K QAA
Sbjct: 618 EAKRELEQTREKCAHYKNGLEETEAMLRKLEAHIEKEITTWEQKYQAA 665
>SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08)
Length = 1183
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 395 LEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETN 571
L++ R +ERT LR+ + E + +RE ++ +N+V +K ++V +VQ TN
Sbjct: 393 LKKERLQMERTVATLRRQKTEFEAEISVIRE-VKIREENSVNVLRK--ERVDLDVQVTN 448
>SB_2197| Best HMM Match : Uso1_p115_C (HMM E-Value=7)
Length = 272
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/48 (22%), Positives = 26/48 (54%)
Frame = -3
Query: 235 KVLWNXLGVVFDVLEEVGSVAXHXRSLGQSDAGEENYELGGHDVLSRD 92
K++ + + +FD +E+ + + + ++ + E E+GG + L RD
Sbjct: 115 KIIADQVRTIFDETKEINASSNKPTATTENTSNESEQEVGGSNALPRD 162
>SB_25422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 258
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 464 KNATXLREKLQAAVQNTVQ--ESQKLAKKVSSNVQETNEKLAPK 589
K LRE LQA+V+ +++ E +K AKK + + +E +PK
Sbjct: 149 KEEQNLRESLQASVEESLESHEQEKKAKKKNKQPKIKHEPESPK 192
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 395 LEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKL---AKKVSSNVQE 565
L SRQ E+ EEL+ DV++ + + L+ A ++++Q L + + + + E
Sbjct: 1263 LSMSRQRNEKLEEELKDTKEDVQRRRSDM-SALKRANDVLIKQNQTLYLETESLKATINE 1321
Query: 566 TNEKLA 583
+EK A
Sbjct: 1322 LSEKSA 1327
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,469,040
Number of Sequences: 59808
Number of extensions: 218369
Number of successful extensions: 809
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2514529411
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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