Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_A16
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 37 0.022
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 37 0.022
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 37 0.022
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 37 0.022
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 34 0.12
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 33 0.36
Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 32 0.47
AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 32 0.47
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 32 0.62
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 31 0.83
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 31 0.83
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 31 0.83
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 31 0.83
AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical ... 31 0.83
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 31 0.83
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 31 0.83
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 31 1.1
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 31 1.1
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 31 1.1
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 31 1.1
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 30 1.9
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 30 1.9
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 30 2.5
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 30 2.5
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 3.3
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 3.3
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 3.3
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 3.3
AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical ... 29 3.3
Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical p... 29 4.4
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 29 4.4
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 29 4.4
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 29 4.4
AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical ... 29 4.4
AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical ... 29 4.4
AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical ... 29 4.4
AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical ... 29 4.4
AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical ... 29 4.4
AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical ... 29 4.4
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 29 5.8
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 29 5.8
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 29 5.8
Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical p... 28 7.7
Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical p... 28 7.7
Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical pr... 28 7.7
U50197-4|AAA91257.1| 443|Caenorhabditis elegans Intermediate fi... 28 7.7
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 560 QETNEKLA 583
+ET K++
Sbjct: 2604 EETRAKIS 2611
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 560 QETNEKLA 583
+ET K++
Sbjct: 2604 EETRAKIS 2611
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 358 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 417
Query: 560 QETNEKLA 583
+ET K++
Sbjct: 418 EETRAKIS 425
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 560 QETNEKLA 583
+ET K++
Sbjct: 2604 EETRAKIS 2611
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 560 QETNEKLA 583
+ET K++
Sbjct: 2604 EETRAKIS 2611
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 34.3 bits (75), Expect = 0.12
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Frame = +2
Query: 383 AKEALEQSRQNIERTAEELRKAHPDVEK-NATXLREKLQAAVQNT-----VQESQKLAKK 544
AKEAL +QN ER EL+K ++++ N K + A +N+ VQE+Q L +K
Sbjct: 178 AKEALAAEKQNSEREKMELKKLTEELQRMNLENKELKNRVASENSRATGAVQEAQVLQEK 237
Query: 545 VSSNVQETNEK 577
+ ++ +EK
Sbjct: 238 LQQALKALDEK 248
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 32.7 bits (71), Expect = 0.36
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Frame = +2
Query: 392 ALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQ------AAVQNTVQESQKLAKKVSS 553
+L++ + + E+T L K +EK+ LRE+ Q A VQ ESQ+ ++
Sbjct: 141 SLKEEKASFEKTQSALLKEKGKIEKDKLMLREEAQKQASMNAEVQKKELESQERLSVLNK 200
Query: 554 NVQETNEKLAPKIKAAYDDFAKK 622
E NEK K+K ++ K
Sbjct: 201 QFMEENEK---KVKLEQEELDSK 220
>Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical
protein K08H10.1 protein.
Length = 733
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/86 (19%), Positives = 34/86 (39%)
Frame = +2
Query: 365 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKK 544
G+A K EA + ++ ++ A D + + + EK+ ++ + ++ A
Sbjct: 377 GEAKDKMGEAWDHTKDKAGEAKDKASDAADDAQGKSKSMTEKIGDSISGAWESTKDTAVS 436
Query: 545 VSSNVQETNEKLAPKIKAAYDDFAKK 622
E K+ I AYD +K
Sbjct: 437 AKDKTAEAAGKVGDSISGAYDTVKEK 462
>AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein.
Length = 733
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/86 (19%), Positives = 34/86 (39%)
Frame = +2
Query: 365 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKK 544
G+A K EA + ++ ++ A D + + + EK+ ++ + ++ A
Sbjct: 377 GEAKDKMGEAWDHTKDKAGEAKDKASDAADDAQGKSKSMTEKIGDSISGAWESTKDTAVS 436
Query: 545 VSSNVQETNEKLAPKIKAAYDDFAKK 622
E K+ I AYD +K
Sbjct: 437 AKDKTAEAAGKVGDSISGAYDTVKEK 462
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 416 IERTAEE-LRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKI 592
+++ A++ + K+ V + + LQ A + VQ + K + SNV E + + I
Sbjct: 280 VQKVADDTIDKSKTTVAADVAKMSGALQKAEEEVVQTIDQTVKNIKSNVNEVKKDVEKNI 339
Query: 593 KAAYDDFAKK 622
DD K+
Sbjct: 340 AEKVDDITKE 349
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKV 547
D A+E + Q + +ER EELR D +K T + L A ++ + KL +K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK- 74
Query: 548 SSNVQETNEKLA 583
VQE ++A
Sbjct: 75 EKTVQEAEAEVA 86
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKV 547
D A+E + Q + +ER EELR D +K T + L A ++ + KL +K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK- 74
Query: 548 SSNVQETNEKLA 583
VQE ++A
Sbjct: 75 EKTVQEAEAEVA 86
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKV 547
D A+E + Q + +ER EELR D +K T + L A ++ + KL +K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK- 74
Query: 548 SSNVQETNEKLA 583
VQE ++A
Sbjct: 75 EKTVQEAEAEVA 86
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKV 547
D A+E + Q + +ER EELR D +K T + L A ++ + KL +K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK- 74
Query: 548 SSNVQETNEKLA 583
VQE ++A
Sbjct: 75 EKTVQEAEAEVA 86
>AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical
protein Y105E8B.1f protein.
Length = 151
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKV 547
D A+E + Q + +ER EELR D +K T + L A ++ + KL +K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK- 74
Query: 548 SSNVQETNEKLA 583
VQE ++A
Sbjct: 75 EKTVQEAEAEVA 86
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKV 547
D A+E + Q + +ER EELR D +K T + L A ++ + KL +K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK- 74
Query: 548 SSNVQETNEKLA 583
VQE ++A
Sbjct: 75 EKTVQEAEAEVA 86
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKV 547
D A+E + Q + +ER EELR D +K T + L A ++ + KL +K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK- 74
Query: 548 SSNVQETNEKLA 583
VQE ++A
Sbjct: 75 EKTVQEAEAEVA 86
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXL---REKLQAAVQNTVQESQKLA 538
D + EA E++R+N E ELR+ + D+ + + L R KL+ + E +++A
Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758
Query: 539 KKVSSNVQETNEKLAPKIKAA 601
++ + V++ + A + A
Sbjct: 1759 NELKNAVEQGQKASADAARLA 1779
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
K + LEQ +E + +++ D+EK + L+ A +N + E K V + +
Sbjct: 1035 KIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQEN-IDEITKQKHDVETTL 1093
Query: 560 QETNEKL 580
+ E L
Sbjct: 1094 KRKEEDL 1100
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXL---REKLQAAVQNTVQESQKLA 538
D + EA E++R+N E ELR+ + D+ + + L R KL+ + E +++A
Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758
Query: 539 KKVSSNVQETNEKLAPKIKAA 601
++ + V++ + A + A
Sbjct: 1759 NELKNAVEQGQKASADAARLA 1779
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
K + LEQ +E + +++ D+EK + L+ A +N + E K V + +
Sbjct: 1035 KIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQEN-IDEITKQKHDVETTL 1093
Query: 560 QETNEKL 580
+ E L
Sbjct: 1094 KRKEEDL 1100
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +2
Query: 395 LEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETNE 574
L+ + +E+ EEL+K+H + + L E+ Q +Q+ + K+ SSN+ N+
Sbjct: 728 LDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQ--LQDQLREEKEQSSNLLVLNQ 785
Query: 575 KL 580
K+
Sbjct: 786 KI 787
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +2
Query: 395 LEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETNE 574
L+ + +E+ EEL+K+H + + L E+ Q +Q+ + K+ SSN+ N+
Sbjct: 728 LDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQ--LQDQLREEKEQSSNLLVLNQ 785
Query: 575 KL 580
K+
Sbjct: 786 KI 787
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = +2
Query: 410 QNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPK 589
+N+++ A+ ++K KN + +K + + QK+ KK + NVQ+ +K +
Sbjct: 1276 KNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNVQKMCKKCAKNVQKMCKKYGLE 1335
Query: 590 IKAAYDD 610
+ +D
Sbjct: 1336 VPVYSND 1342
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +2
Query: 425 TAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAY 604
T L A V L EK+ + V N +E + KK V+E EK KIK Y
Sbjct: 336 TIAHLDYAEESVHTTKRQLEEKI-SEVNNFKKELIEEFKKCKKGVEEEFEKKFEKIKEDY 394
Query: 605 DDFAKK 622
D+ +K
Sbjct: 395 DELYEK 400
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +2
Query: 425 TAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAY 604
T L A V L EK+ + V N +E + KK V+E EK KIK Y
Sbjct: 336 TIAHLDYAEESVHTTKRQLEEKI-SEVNNFKKELIEEFKKCKKGVEEEFEKKFEKIKEDY 394
Query: 605 DDFAKK 622
D+ +K
Sbjct: 395 DELYEK 400
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +2
Query: 365 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKK 544
G ++G K+ ++++ + A++ +++KN T L EKL+A + Q KK
Sbjct: 15 GSSSGGGKKLDSLPKEDLVKFAKKQVAHVAEMKKNQTALMEKLKAKMSELEQ-----VKK 69
Query: 545 VSSNVQETNEKL 580
+ N++ NEKL
Sbjct: 70 DAENLKLINEKL 81
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +2
Query: 365 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKK 544
G ++G K+ ++++ + A++ +++KN T L EKL+A + Q KK
Sbjct: 15 GSSSGGGKKLDSLPKEDLVKFAKKQVAHVAEMKKNQTALMEKLKAKMSELEQ-----VKK 69
Query: 545 VSSNVQETNEKL 580
+ N++ NEKL
Sbjct: 70 DAENLKLINEKL 81
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATXLREKLQAAVQNTVQESQKLAK 541
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+ + K
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHK 446
Query: 542 K 544
+
Sbjct: 447 Q 447
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATXLREKLQAAVQNTVQESQKLAK 541
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+ + K
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHK 446
Query: 542 K 544
+
Sbjct: 447 Q 447
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATXLREKLQAAVQNTVQESQKLAK 541
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+ + K
Sbjct: 147 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHK 206
Query: 542 K 544
+
Sbjct: 207 Q 207
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATXLREKLQAAVQNTVQESQKLAK 541
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+ + K
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHK 446
Query: 542 K 544
+
Sbjct: 447 Q 447
>AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical
protein Y39H10B.2 protein.
Length = 232
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Frame = +2
Query: 395 LEQSRQNIERT-------AEELRKAHPDVEKNATXLREKLQAAVQNT-----VQESQKLA 538
+EQSRQ E EE ++ +++ +A R + Q ++ N+ VQ+ QKL
Sbjct: 72 MEQSRQQSEAMISQMKTQTEEFQRIVQELKDDADERRNRAQTSLDNSEYETLVQQRQKLI 131
Query: 539 KKVSSNVQETNEKL 580
+ + QET E+L
Sbjct: 132 ENSEKSQQETKEQL 145
>Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical
protein F36A2.14 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQ 529
K+K+ SR+N ++TAE++ ++ D K A ++ + + Q V+ +
Sbjct: 94 KSKDESGSSRKNSKKTAEDMDQSSDDTTKPAEETKKTVSSKKQKKVKSEE 143
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +2
Query: 362 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAK 541
L +A K E + + + + E+ A + A R+K + A + +QE++ + K
Sbjct: 1383 LAEARKKLDEENREVMEELRKKKEKELSAEKERADMAEQARDKAERAKKKAIQEAEDVQK 1442
Query: 542 KVSSNVQETNE 574
+++ V T E
Sbjct: 1443 ELTDVVAATRE 1453
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +2
Query: 362 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAK 541
L +A K E + + + + E+ A + A R+K + A + +QE++ + K
Sbjct: 1383 LAEARKKLDEENREVMEELRKKKEKELSAEKERADMAEQARDKAERAKKKAIQEAEDVQK 1442
Query: 542 KVSSNVQETNE 574
+++ V T E
Sbjct: 1443 ELTDVVAATRE 1453
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +2
Query: 362 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAK 541
L +A K E + + + + E+ A + A R+K + A + +QE++ + K
Sbjct: 1383 LAEARKKLDEENREVMEELRKKKEKELSAEKERADMAEQARDKAERAKKKAIQEAEDVQK 1442
Query: 542 KVSSNVQETNE 574
+++ V T E
Sbjct: 1443 ELTDVVAATRE 1453
>AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical
protein C04C3.5a protein.
Length = 331
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
+A++ L+ + QNI + E+L +V + L EK++ + Q ++ AK S
Sbjct: 105 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 164
Query: 560 Q--ETNEKLAPKIKAAYD 607
Q + E+ ++K Y+
Sbjct: 165 QYMDEYERFEERLKKLYE 182
>AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical
protein C04C3.5c protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
+A++ L+ + QNI + E+L +V + L EK++ + Q ++ AK S
Sbjct: 167 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 226
Query: 560 Q--ETNEKLAPKIKAAYD 607
Q + E+ ++K Y+
Sbjct: 227 QYMDEYERFEERLKKLYE 244
>AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical
protein C04C3.5b protein.
Length = 404
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
+A++ L+ + QNI + E+L +V + L EK++ + Q ++ AK S
Sbjct: 178 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 237
Query: 560 Q--ETNEKLAPKIKAAYD 607
Q + E+ ++K Y+
Sbjct: 238 QYMDEYERFEERLKKLYE 255
>AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical
protein protein.
Length = 331
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
+A++ L+ + QNI + E+L +V + L EK++ + Q ++ AK S
Sbjct: 105 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 164
Query: 560 Q--ETNEKLAPKIKAAYD 607
Q + E+ ++K Y+
Sbjct: 165 QYMDEYERFEERLKKLYE 182
>AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical
protein protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
+A++ L+ + QNI + E+L +V + L EK++ + Q ++ AK S
Sbjct: 167 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 226
Query: 560 Q--ETNEKLAPKIKAAYD 607
Q + E+ ++K Y+
Sbjct: 227 QYMDEYERFEERLKKLYE 244
>AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical
protein protein.
Length = 404
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
+A++ L+ + QNI + E+L +V + L EK++ + Q ++ AK S
Sbjct: 178 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 237
Query: 560 Q--ETNEKLAPKIKAAYD 607
Q + E+ ++K Y+
Sbjct: 238 QYMDEYERFEERLKKLYE 255
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/71 (26%), Positives = 39/71 (54%)
Frame = +2
Query: 386 KEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQE 565
KE ++ ++ E T E ++A ++ EKL AA++NT KL ++VS V++
Sbjct: 556 KETSQREQKVAELTTLERKEARDQIQM------EKLDAAIENTT----KLTEQVSDAVEK 605
Query: 566 TNEKLAPKIKA 598
+ E++ +++
Sbjct: 606 SEEEMVQILRS 616
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/71 (26%), Positives = 39/71 (54%)
Frame = +2
Query: 386 KEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQE 565
KE ++ ++ E T E ++A ++ EKL AA++NT KL ++VS V++
Sbjct: 556 KETSQREQKVAELTTLERKEARDQIQM------EKLDAAIENTT----KLTEQVSDAVEK 605
Query: 566 TNEKLAPKIKA 598
+ E++ +++
Sbjct: 606 SEEEMVQILRS 616
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/71 (26%), Positives = 39/71 (54%)
Frame = +2
Query: 386 KEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQE 565
KE ++ ++ E T E ++A ++ EKL AA++NT KL ++VS V++
Sbjct: 601 KETSQREQKVAELTTLERKEARDQIQM------EKLDAAIENTT----KLTEQVSDAVEK 650
Query: 566 TNEKLAPKIKA 598
+ E++ +++
Sbjct: 651 SEEEMVQILRS 661
>Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
KA E LEQ + + + + VEK + LQ V++ V E++ L+ VSS
Sbjct: 67 KAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLP 126
Query: 560 QETNEKLAPKIKAA 601
+ ++ ++ A
Sbjct: 127 NHADSPVSTSMREA 140
>Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
KA E LEQ + + + + VEK + LQ V++ V E++ L+ VSS
Sbjct: 76 KAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLP 135
Query: 560 QETNEKLAPKIKAA 601
+ ++ ++ A
Sbjct: 136 NHADSPVSTSMREA 149
>Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
KA E LEQ + + + + VEK + LQ V++ V E++ L+ VSS
Sbjct: 67 KAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLP 126
Query: 560 QETNEKLAPKIKAA 601
+ ++ ++ A
Sbjct: 127 NHADSPVSTSMREA 140
>Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNV 559
KA E LEQ + + + + VEK + LQ V++ V E++ L+ VSS
Sbjct: 76 KAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLP 135
Query: 560 QETNEKLAPKIKAA 601
+ ++ ++ A
Sbjct: 136 NHADSPVSTSMREA 149
>U50197-4|AAA91257.1| 443|Caenorhabditis elegans Intermediate
filament, d protein 2 protein.
Length = 443
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +2
Query: 395 LEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETN 571
+ +++ I + +RK PDV L Q VQ +E ++ K+ SN++ N
Sbjct: 116 VRENKAKISTAEQNIRKLEPDVISAKKNLESSFQLRVQ--TREDKRSQMKILSNLEAEN 172
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +2
Query: 395 LEQSRQNIERTAEELRKAHPDVEKNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETNE 574
LE + TA++ ++A PD+ L + L + QNT +++A K + ++ TN+
Sbjct: 197 LEAQLKREADTAQKPKQADPDLLNKVGRLNDLLTSEKQNTRVLQEEVA-KFKAELESTNK 255
Query: 575 KLAPKI 592
+ K+
Sbjct: 256 TMKQKL 261
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,228,437
Number of Sequences: 27780
Number of extensions: 155979
Number of successful extensions: 798
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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