Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_A15
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 218 5e-57
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 218 5e-57
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 93 1e-40
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 132 3e-31
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 98 8e-21
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 98 8e-21
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 50 2e-06
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 30 2.4
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 30 2.4
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 218 bits (532), Expect = 5e-57
Identities = 118/237 (49%), Positives = 129/237 (54%)
Frame = +2
Query: 143 VVIGXVXSGXSXXXGXLXXXCGGXXXRXXEXFXXXAXXXGXGSFXXAWVLXXLKAXRXRG 322
VVIG V SG S G L CGG R E F A G GSF AWVL LKA R RG
Sbjct: 11 VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERG 70
Query: 323 XXXXXALWXFEXXXXXVTXXDAPGXXXFXXXXXXGXSQAXCAVLXVAAGTGXFEAGISKN 502
ALW FE +T DAPG F G SQA CAVL VA GTG FEAGISKN
Sbjct: 71 ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKN 130
Query: 503 GXTRXXALLAFXLGVXXLXVGVXXMXSTEPPYSXPXFXXXXXXVSSYXXXXGXHPAAVXF 682
G TR ALLA LGV L V M STEPP+S F VS + G +P AV F
Sbjct: 131 GQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPF 190
Query: 683 VPISGWXGXXXLEPSTXMPWFXGWXVXRXXXQADXPCLIEXLDAILXPGRPXEKPRR 853
VPISG+ G LE S+ MPWF GW V R A L+E LD+I+ P RP ++P R
Sbjct: 191 VPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLR 247
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 218 bits (532), Expect = 5e-57
Identities = 118/237 (49%), Positives = 129/237 (54%)
Frame = +2
Query: 143 VVIGXVXSGXSXXXGXLXXXCGGXXXRXXEXFXXXAXXXGXGSFXXAWVLXXLKAXRXRG 322
VVIG V SG S G L CGG R E F A G GSF AWVL LKA R RG
Sbjct: 11 VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERG 70
Query: 323 XXXXXALWXFEXXXXXVTXXDAPGXXXFXXXXXXGXSQAXCAVLXVAAGTGXFEAGISKN 502
ALW FE +T DAPG F G SQA CAVL VA GTG FEAGISKN
Sbjct: 71 ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKN 130
Query: 503 GXTRXXALLAFXLGVXXLXVGVXXMXSTEPPYSXPXFXXXXXXVSSYXXXXGXHPAAVXF 682
G TR ALLA LGV L V M STEPP+S F VS + G +P AV F
Sbjct: 131 GQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPF 190
Query: 683 VPISGWXGXXXLEPSTXMPWFXGWXVXRXXXQADXPCLIEXLDAILXPGRPXEKPRR 853
VPISG+ G LE S+ MPWF GW V R A L+E LD+I+ P RP ++P R
Sbjct: 191 VPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLR 247
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 93.5 bits (222), Expect(2) = 1e-40
Identities = 52/107 (48%), Positives = 53/107 (49%)
Frame = +2
Query: 143 VVIGXVXSGXSXXXGXLXXXCGGXXXRXXEXFXXXAXXXGXGSFXXAWVLXXLKAXRXRG 322
VVIG V SG S G L CGG R E F A G GSF AWVL LKA R RG
Sbjct: 11 VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERG 70
Query: 323 XXXXXALWXFEXXXXXVTXXDAPGXXXFXXXXXXGXSQAXCAVLXVA 463
ALW FE +T DAPG F G SQA CAVL VA
Sbjct: 71 ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 91.5 bits (217), Expect(2) = 1e-40
Identities = 45/100 (45%), Positives = 55/100 (55%)
Frame = +2
Query: 554 LXVGVXXMXSTEPPYSXPXFXXXXXXVSSYXXXXGXHPAAVXFVPISGWXGXXXLEPSTX 733
L V M STEPP+S F VS + G +P AV FVPISG+ G LE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 734 MPWFXGWXVXRXXXQADXPCLIEXLDAILXPGRPXEKPRR 853
MPWF GW V R A L+E LD+I+ P RP ++P R
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLR 213
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 132 bits (319), Expect = 3e-31
Identities = 74/138 (53%), Positives = 75/138 (54%)
Frame = +2
Query: 143 VVIGXVXSGXSXXXGXLXXXCGGXXXRXXEXFXXXAXXXGXGSFXXAWVLXXLKAXRXRG 322
VVIG V SG S G L CGG R E F A G GSF AWVL LKA R RG
Sbjct: 11 VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERG 70
Query: 323 XXXXXALWXFEXXXXXVTXXDAPGXXXFXXXXXXGXSQAXCAVLXVAAGTGXFEAGISKN 502
ALW FE +T DAPG F G SQA CAVL VA GTG FEAGISKN
Sbjct: 71 ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKN 130
Query: 503 GXTRXXALLAFXLGVXXL 556
G TR ALLA LGV L
Sbjct: 131 GQTREHALLAQTLGVKQL 148
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 97.9 bits (233), Expect = 8e-21
Identities = 71/237 (29%), Positives = 97/237 (40%)
Frame = +2
Query: 143 VVIGXVXSGXSXXXGXLXXXCGGXXXRXXEXFXXXAXXXGXGSFXXAWVLXXLKAXRXRG 322
+V+G V +G S G L R + F A G SF AWVL + R RG
Sbjct: 174 IVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERG 233
Query: 323 XXXXXALWXFEXXXXXVTXXDAPGXXXFXXXXXXGXSQAXCAVLXVAAGTGXFEAGISKN 502
FE + DAPG F G SQA A+L V A TG FE G
Sbjct: 234 VTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENG 293
Query: 503 GXTRXXALLAFXLGVXXLXVGVXXMXSTEPPYSXPXFXXXXXXVSSYXXXXGXHPAAVXF 682
G T+ ALL LGV L V V + + + +S F +S + + F
Sbjct: 294 GQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGF-SKPKF 350
Query: 683 VPISGWXGXXXLEPSTXMPWFXGWXVXRXXXQADXPCLIEXLDAILXPGRPXEKPRR 853
VP+SG+ G ++ + W+ D PCL+E +D+ + P P + P R
Sbjct: 351 VPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDGPLR 394
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 97.9 bits (233), Expect = 8e-21
Identities = 71/237 (29%), Positives = 97/237 (40%)
Frame = +2
Query: 143 VVIGXVXSGXSXXXGXLXXXCGGXXXRXXEXFXXXAXXXGXGSFXXAWVLXXLKAXRXRG 322
+V+G V +G S G L R + F A G SF AWVL + R RG
Sbjct: 192 IVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERG 251
Query: 323 XXXXXALWXFEXXXXXVTXXDAPGXXXFXXXXXXGXSQAXCAVLXVAAGTGXFEAGISKN 502
FE + DAPG F G SQA A+L V A TG FE G
Sbjct: 252 VTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENG 311
Query: 503 GXTRXXALLAFXLGVXXLXVGVXXMXSTEPPYSXPXFXXXXXXVSSYXXXXGXHPAAVXF 682
G T+ ALL LGV L V V + + + +S F +S + + F
Sbjct: 312 GQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGF-SKPKF 368
Query: 683 VPISGWXGXXXLEPSTXMPWFXGWXVXRXXXQADXPCLIEXLDAILXPGRPXEKPRR 853
VP+SG+ G ++ + W+ D PCL+E +D+ + P P + P R
Sbjct: 369 VPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDGPLR 412
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 79.8 bits (188), Expect = 2e-15
Identities = 61/229 (26%), Positives = 86/229 (37%), Gaps = 3/229 (1%)
Frame = +2
Query: 143 VVIGXVXSGXSXXXGXLXXXCGGXXXRXXEXFXXXAXXXGXGSFXXAWVLXXLKAXRXRG 322
V +G V +G S G L G R E + A G S+ +W + R +G
Sbjct: 113 VFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKG 172
Query: 323 XXXXXALWXFEXXXXXVTXXDAPGXXXFXXXXXXGXSQAXCAVLXVAAGTGXFEAGISKN 502
FE T DAPG F G +QA AVL ++A G FE G +
Sbjct: 173 KTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRG 232
Query: 503 GXTRXXALLAFXLGVXXLXVGVXXMXSTEPPYSXPXFXXXXXXVSSYXXXXGXHPAA-VX 679
G TR ++L GV L + V M + F ++ + G +P +
Sbjct: 233 GQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDIT 292
Query: 680 FVPISGWXGXXXLEPSTXMP--WFXGWXVXRXXXQADXPCLIEXLDAIL 820
+VP SG G + T W+ G PC IE +D +L
Sbjct: 293 YVPCSGLTGAFIKDRPTGSEGNWYSG------------PCFIEFIDVLL 329
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/57 (47%), Positives = 28/57 (49%)
Frame = +2
Query: 143 VVIGXVXSGXSXXXGXLXXXCGGXXXRXXEXFXXXAXXXGXGSFXXAWVLXXLKAXR 313
VVIG V SG S G L CGG R E F A G GSF AWVL LK +
Sbjct: 11 VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/61 (31%), Positives = 23/61 (37%)
Frame = +2
Query: 302 KAXRXRGXXXXXALWXFEXXXXXVTXXDAPGXXXFXXXXXXGXSQAXCAVLXVAAGTGXF 481
K + RG A +E + D PG F G SQ AVL +AA G
Sbjct: 87 KEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVM 146
Query: 482 E 484
E
Sbjct: 147 E 147
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/61 (31%), Positives = 23/61 (37%)
Frame = +2
Query: 302 KAXRXRGXXXXXALWXFEXXXXXVTXXDAPGXXXFXXXXXXGXSQAXCAVLXVAAGTGXF 481
K + RG A +E + D PG F G SQ AVL +AA G
Sbjct: 87 KEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVM 146
Query: 482 E 484
E
Sbjct: 147 E 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,818,223
Number of Sequences: 27780
Number of extensions: 70245
Number of successful extensions: 62
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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