Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_A15
(857 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 243 1e-66
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 232 4e-63
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 208 7e-56
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 191 6e-51
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 4.8
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 243 bits (595), Expect = 1e-66
Identities = 131/237 (55%), Positives = 136/237 (57%)
Frame = +2
Query: 143 VVIGXVXSGXSXXXGXLXXXCGGXXXRXXEXFXXXAXXXGXGSFXXAWVLXXLKAXRXRG 322
VVIG V SG S G L CGG R E F A G GSF AWVL LKA R RG
Sbjct: 11 VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERG 70
Query: 323 XXXXXALWXFEXXXXXVTXXDAPGXXXFXXXXXXGXSQAXCAVLXVAAGTGXFEAGISKN 502
ALW FE VT DAPG F G SQA CAVL VAAGTG FEAGISKN
Sbjct: 71 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 130
Query: 503 GXTRXXALLAFXLGVXXLXVGVXXMXSTEPPYSXPXFXXXXXXVSSYXXXXGXHPAAVXF 682
G TR ALLAF LGV L VGV M STEPPYS F VSSY G +PAAV F
Sbjct: 131 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAF 190
Query: 683 VPISGWXGXXXLEPSTXMPWFXGWXVXRXXXQADXPCLIEXLDAILXPGRPXEKPRR 853
VPISGW G LE S+ MPWF GW V R + + CLIE LDAIL P RP +K R
Sbjct: 191 VPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALR 247
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 232 bits (567), Expect = 4e-63
Identities = 126/237 (53%), Positives = 131/237 (55%)
Frame = +2
Query: 143 VVIGXVXSGXSXXXGXLXXXCGGXXXRXXEXFXXXAXXXGXGSFXXAWVLXXLKAXRXRG 322
VVIG V SG S G L CGG R E F A G GSF AWVL LKA R RG
Sbjct: 11 VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERG 70
Query: 323 XXXXXALWXFEXXXXXVTXXDAPGXXXFXXXXXXGXSQAXCAVLXVAAGTGXFEAGISKN 502
ALW FE VT DAPG F G SQA CAVL VAAG G FEAGISKN
Sbjct: 71 ITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKN 130
Query: 503 GXTRXXALLAFXLGVXXLXVGVXXMXSTEPPYSXPXFXXXXXXVSSYXXXXGXHPAAVXF 682
G TR ALLAF LGV L VGV M T+PPYS F VSSY G + A+V F
Sbjct: 131 GQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAF 190
Query: 683 VPISGWXGXXXLEPSTXMPWFXGWXVXRXXXQADXPCLIEXLDAILXPGRPXEKPRR 853
VPISGW G LEPS PW+ GW V R AD LIE LDAIL P RP +K R
Sbjct: 191 VPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSRPTDKALR 247
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 208 bits (507), Expect = 7e-56
Identities = 109/190 (57%), Positives = 114/190 (60%)
Frame = +2
Query: 284 WVLXXLKAXRXRGXXXXXALWXFEXXXXXVTXXDAPGXXXFXXXXXXGXSQAXCAVLXVA 463
WVL LKA R RG ALW FE VT DAPG F G SQA CAVL VA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 464 AGTGXFEAGISKNGXTRXXALLAFXLGVXXLXVGVXXMXSTEPPYSXPXFXXXXXXVSSY 643
AGTG FEAGISKNG TR ALLAF LGV L VGV M STEPPYS F VSSY
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120
Query: 644 XXXXGXHPAAVXFVPISGWXGXXXLEPSTXMPWFXGWXVXRXXXQADXPCLIEXLDAILX 823
G +PAAV FVPISGW G LE S+ MPWF GW V R + + CLIE LDAIL
Sbjct: 121 IKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILP 180
Query: 824 PGRPXEKPRR 853
P RP +K R
Sbjct: 181 PTRPTDKALR 190
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 191 bits (466), Expect = 6e-51
Identities = 99/169 (58%), Positives = 104/169 (61%)
Frame = +2
Query: 338 ALWXFEXXXXXVTXXDAPGXXXFXXXXXXGXSQAXCAVLXVAAGTGXFEAGISKNGXTRX 517
ALW FE VT DAPG F G SQA CAVL VAAGTG FEAGISKNG TR
Sbjct: 3 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 62
Query: 518 XALLAFXLGVXXLXVGVXXMXSTEPPYSXPXFXXXXXXVSSYXXXXGXHPAAVXFVPISG 697
ALLAF LGV L VGV M STEPPYS F VSSY G +PAAV FVPISG
Sbjct: 63 HALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 122
Query: 698 WXGXXXLEPSTXMPWFXGWXVXRXXXQADXPCLIEXLDAILXPGRPXEK 844
W G LE S+ MPWF GW V R + + CLIE LDAIL P RP +K
Sbjct: 123 WHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDK 171
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 22.6 bits (46), Expect = 4.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 371 VTXXDAPGXXXFXXXXXXGXSQAXCAVLXVAAGTGXFE 484
VT D PG F G VL VAA G E
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE 232
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,775
Number of Sequences: 438
Number of extensions: 1001
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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