Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_A10
         (901 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g64990.1 68414.m07366 expressed protein contains similarity t...    29   5.6  
At3g20830.1 68416.m02634 protein kinase family protein contains ...    28   7.3  
At4g17740.2 68417.m02649 C-terminal processing protease, putativ...    28   9.7  
At4g17740.1 68417.m02648 C-terminal processing protease, putativ...    28   9.7  

>At1g64990.1 68414.m07366 expressed protein contains similarity to
           putative G-protein coupled receptor GI:6649579 from
           [Homo sapiens]
          Length = 468

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
 Frame = -1

Query: 427 IYLIVFIPSFIVLYISLR-----KERALIRRYQLLYAFLFAFGQCDETIVVPLAASVNEF 263
           I L+VF+  +   Y+ LR     +ERA +  +  L AFL+AF +    +  P+ ++   F
Sbjct: 86  ILLLVFMLPYYHCYLMLRNSGVRRERASVGAFLFLSAFLYAFWRMG--VHFPMPSADKGF 143

Query: 262 FT 257
           FT
Sbjct: 144 FT 145


>At3g20830.1 68416.m02634 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 408

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 755 PIRKPPLPARWPIH*CRKNLPHL 687
           P   PP P R P H CRKN P +
Sbjct: 384 PSSAPPSPLRSPPHVCRKNDPFI 406


>At4g17740.2 68417.m02649 C-terminal processing protease, putative
           similar to C-terminal protease precursor [Spinacia
           oleracea] GI:999435; similar to SP|Q44879| (Bartonella
           bacilliformis)
          Length = 505

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +2

Query: 161 PTTKPICE-QAFGNSGPSFAYIKLYSYNQKTKKCEEFIYGGCQGND-NRFI 307
           P    +CE    G++ P   YIKL ++NQ             +GN+ N F+
Sbjct: 293 PVKSRLCELPGSGSNSPKIGYIKLTTFNQNASSAVREAIETLRGNNVNAFV 343


>At4g17740.1 68417.m02648 C-terminal processing protease, putative
           similar to C-terminal protease precursor [Spinacia
           oleracea] GI:999435; similar to SP|Q44879| (Bartonella
           bacilliformis)
          Length = 515

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +2

Query: 161 PTTKPICE-QAFGNSGPSFAYIKLYSYNQKTKKCEEFIYGGCQGND-NRFI 307
           P    +CE    G++ P   YIKL ++NQ             +GN+ N F+
Sbjct: 303 PVKSRLCELPGSGSNSPKIGYIKLTTFNQNASSAVREAIETLRGNNVNAFV 353


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,012,923
Number of Sequences: 28952
Number of extensions: 241049
Number of successful extensions: 492
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2120147664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)