Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_A08
(861 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 117 1e-26
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 74 1e-13
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 74 1e-13
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 66 2e-11
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 64 2e-10
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 64 2e-10
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 64 2e-10
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 63 2e-10
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 63 2e-10
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 58 1e-08
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 58 1e-08
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 49 5e-06
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 49 5e-06
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 46 3e-05
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 28 9.8
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 117 bits (281), Expect = 1e-26
Identities = 56/100 (56%), Positives = 70/100 (70%)
Frame = +3
Query: 348 IXVQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQA 527
I V+HPAAKSMIEIARTQDE G GTTSV +LAG ++A A +L Q HPT+II+ YRQA
Sbjct: 72 ITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQA 131
Query: 528 LEDAIVLLQDKISVPVDLXDXXXXXXVIRSCVGTXYIGRW 647
LED I ++K S VD+ D V++SC+GT I +W
Sbjct: 132 LEDMIQWSENKFSKTVDITDDAEIAKVVKSCLGTKMISKW 171
Score = 97.1 bits (231), Expect = 1e-20
Identities = 48/66 (72%), Positives = 53/66 (80%)
Frame = +2
Query: 146 GXXPILVLSQNTKRXSGRKVQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXD 325
G PI+VLSQ TKR SG +VQ+ NI+A K ADVI T LGP+AMLKMLMDPMGG VMT D
Sbjct: 5 GQQPIIVLSQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTND 64
Query: 326 GNAILR 343
GNAILR
Sbjct: 65 GNAILR 70
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/98 (35%), Positives = 55/98 (56%)
Frame = +3
Query: 348 IXVQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQA 527
+ V+HPA K ++E+A+ QDE VG GTTSV ++A +L A + Q +HPT II YR A
Sbjct: 69 LEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLA 128
Query: 528 LEDAIVLLQDKISVPVDLXDXXXXXXVIRSCVGTXYIG 641
++A+ + + IS D ++ + + IG
Sbjct: 129 CKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIG 166
Score = 48.0 bits (109), Expect = 9e-06
Identities = 20/60 (33%), Positives = 39/60 (65%)
Frame = +2
Query: 164 VLSQNTKRXSGRKVQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDGNAILR 343
+L+ KR +G+ ++ +N++A A+++ + LGP + KML+D +G ++T DG IL+
Sbjct: 8 ILALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/98 (35%), Positives = 55/98 (56%)
Frame = +3
Query: 348 IXVQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQA 527
+ V+HPA K ++E+A+ QDE VG GTTSV ++A +L A + Q +HPT II YR A
Sbjct: 69 LEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLA 128
Query: 528 LEDAIVLLQDKISVPVDLXDXXXXXXVIRSCVGTXYIG 641
++A+ + + IS D ++ + + IG
Sbjct: 129 CKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIG 166
Score = 48.0 bits (109), Expect = 9e-06
Identities = 20/60 (33%), Positives = 39/60 (65%)
Frame = +2
Query: 164 VLSQNTKRXSGRKVQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDGNAILR 343
+L+ KR +G+ ++ +N++A A+++ + LGP + KML+D +G ++T DG IL+
Sbjct: 8 ILALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/76 (43%), Positives = 49/76 (64%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
V HP AK ++E+++ QD G GTT+V V+AG +L A L++ IHPT I ++ A
Sbjct: 82 VIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAA 141
Query: 534 DAIVLLQDKISVPVDL 581
+A +L D++S PVDL
Sbjct: 142 EAEKIL-DEMSSPVDL 156
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +2
Query: 203 VQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDGNAIL 340
V+ NI A K AD + T LGP+ M KM+ G +T DG IL
Sbjct: 32 VRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATIL 77
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/76 (43%), Positives = 49/76 (64%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
V HP AK ++E+++ QD G GTT+V V+AG +L A L++ IHPT I ++ A
Sbjct: 82 VIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAA 141
Query: 534 DAIVLLQDKISVPVDL 581
+A +L D++S PVDL
Sbjct: 142 EAEKIL-DEMSSPVDL 156
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +2
Query: 203 VQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDGNAIL 340
V+ NI A K AD + T LGP+ M KM+ G +T DG IL
Sbjct: 32 VRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATIL 77
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = +3
Query: 348 IXVQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQA 527
I V +PAAK +++++ TQD VG GTTSV VLA +L A + Q IHP II YR+A
Sbjct: 71 IGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRA 130
Query: 528 L 530
L
Sbjct: 131 L 131
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = +3
Query: 348 IXVQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQA 527
I V +PAAK +++++ TQD VG GTTSV VLA +L A + Q IHP II YR+A
Sbjct: 71 IGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRA 130
Query: 528 L 530
L
Sbjct: 131 L 131
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = +3
Query: 348 IXVQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQA 527
I V +PAAK +++++ TQD VG GTTSV VLA +L A + Q IHP II YR+A
Sbjct: 71 IGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRA 130
Query: 528 L 530
L
Sbjct: 131 L 131
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +3
Query: 348 IXVQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQA 527
+ + PAA +M++IAR+QD VG GTTSV VLA +L PF+ +HP ++IR +A
Sbjct: 69 LDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKA 128
Query: 528 LEDAIVLLQD 557
E + L D
Sbjct: 129 CEKTLKNLAD 138
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 155 PILVLSQNTKRXSGRKVQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDGNA 334
PI++L T+ G+ + NI+A + AD I T LGP+ + K+++D G ++ DG
Sbjct: 5 PIILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGAT 64
Query: 335 ILR 343
IL+
Sbjct: 65 ILK 67
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +3
Query: 348 IXVQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQA 527
+ + PAA +M++IAR+QD VG GTTSV VLA +L PF+ +HP ++IR +A
Sbjct: 69 LDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKA 128
Query: 528 LEDAIVLLQD 557
E + L D
Sbjct: 129 CEKTLKNLAD 138
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 155 PILVLSQNTKRXSGRKVQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDGNA 334
PI++L T+ G+ + NI+A + AD I T LGP+ + K+++D G ++ DG
Sbjct: 5 PIILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGAT 64
Query: 335 ILR 343
IL+
Sbjct: 65 ILK 67
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/97 (32%), Positives = 51/97 (52%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
VQH AK M+E++++QD +G GTT V VLAG +L A + + IHP I + A +
Sbjct: 84 VQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACK 143
Query: 534 DAIVLLQDKISVPVDLXDXXXXXXVIRSCVGTXYIGR 644
A+ L D IS + + ++ +G+ + R
Sbjct: 144 KALETL-DSISDKFPVENRERLVETAQTSLGSKIVNR 179
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 155 PILVL--SQNTKRXSGRKVQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDG 328
P +V+ +N KR +G + +I A + A+ + T LGP+ + KML+ P G +T DG
Sbjct: 16 PFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDG 75
Query: 329 NAIL 340
I+
Sbjct: 76 ATIM 79
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/97 (32%), Positives = 51/97 (52%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
VQH AK M+E++++QD +G GTT V VLAG +L A + + IHP I + A +
Sbjct: 84 VQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACK 143
Query: 534 DAIVLLQDKISVPVDLXDXXXXXXVIRSCVGTXYIGR 644
A+ L D IS + + ++ +G+ + R
Sbjct: 144 KALETL-DSISDKFPVENRERLVETAQTSLGSKIVNR 179
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 155 PILVL--SQNTKRXSGRKVQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDG 328
P +V+ +N KR +G + +I A + A+ + T LGP+ + KML+ P G +T DG
Sbjct: 16 PFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDG 75
Query: 329 NAIL 340
I+
Sbjct: 76 ATIM 79
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/97 (32%), Positives = 51/97 (52%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
VQH AK M+E++++QD +G GTT V VLAG +L A + + IHP I + A +
Sbjct: 84 VQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACK 143
Query: 534 DAIVLLQDKISVPVDLXDXXXXXXVIRSCVGTXYIGR 644
A+ L D IS + + ++ +G+ + R
Sbjct: 144 KALETL-DSISDKFPVENRERLVETAQTSLGSKIVNR 179
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 155 PILVL--SQNTKRXSGRKVQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDG 328
P +V+ +N KR +G + +I A + A+ + T LGP+ + KML+ P G +T DG
Sbjct: 16 PFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDG 75
Query: 329 NAIL 340
I+
Sbjct: 76 ATIM 79
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
+QHP A + + + QD+ G GTTS +L G +L A + + +HP ++ + A
Sbjct: 69 IQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANT 128
Query: 534 DAIVLLQD-KISVPVD 578
+ LL+ K PV+
Sbjct: 129 KTLELLEKFKKEAPVE 144
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 215 NISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDGNAIL 340
NIS + DV+ + LGP+ LKML+ G +T DGN +L
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLL 64
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
+QHP A + + + QD+ G GTTS +L G +L A + + +HP ++ + A
Sbjct: 69 IQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANT 128
Query: 534 DAIVLLQD-KISVPVD 578
+ LL+ K PV+
Sbjct: 129 KTLELLEKFKKEAPVE 144
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 215 NISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDGNAIL 340
NIS + DV+ + LGP+ LKML+ G +T DGN +L
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLL 64
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +3
Query: 348 IXVQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQA 527
+ +QHPAA+ +I Q++ +G T +V +LA +L A + + P + Y QA
Sbjct: 75 LEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQA 134
Query: 528 LEDAIVLLQD-KISVPVDLXDXXXXXXVIRSCV 623
E A+ +L + D+ + IRS +
Sbjct: 135 AEKALEILPTLVVKEATDMKNIEEVRQYIRSAI 167
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +3
Query: 357 QHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALED 536
Q+ AK + ++A +E G GTT VLA + + Q + I R A+E
Sbjct: 82 QNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRGVMNAVEV 141
Query: 537 AIVLLQDKISVPV 575
+ L+ KIS V
Sbjct: 142 VVAELK-KISKKV 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,603,871
Number of Sequences: 27780
Number of extensions: 179126
Number of successful extensions: 224
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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