Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_A08
(861 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 111 8e-25
At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP... 69 4e-12
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 65 5e-11
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 65 5e-11
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 64 2e-10
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 55 5e-08
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 52 4e-07
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 52 4e-07
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 41 0.001
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 41 0.001
At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit, pu... 35 0.080
At5g56500.1 68418.m07051 chaperonin, putative similar to SWISS-P... 30 2.3
At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta su... 29 4.0
At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta su... 29 4.0
At5g18820.1 68418.m02236 chaperonin, putative similar to SWISS-P... 29 5.3
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 29 5.3
At3g13470.1 68416.m01695 chaperonin, putative similar SWISS-PROT... 28 9.2
>At5g26360.1 68418.m03151 chaperonin, putative similar to
SWISS-PROT:P50143- T-complex protein 1, gamma subunit
(TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 555
Score = 111 bits (266), Expect = 8e-25
Identities = 54/100 (54%), Positives = 72/100 (72%)
Frame = +3
Query: 348 IXVQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQA 527
+ V HPAAKSMIE++RTQDE VG GTTSV VLAG ML A FL +N HPTVI R Y +A
Sbjct: 68 LDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFLEKNYHPTVICRAYIKA 127
Query: 528 LEDAIVLLQDKISVPVDLXDXXXXXXVIRSCVGTXYIGRW 647
LED+I +L DKI++ +D+ D +++SC+GT + ++
Sbjct: 128 LEDSIAVL-DKIAMSIDINDRSQVLGLVKSCIGTKFTSQF 166
Score = 79.0 bits (186), Expect = 4e-15
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +2
Query: 155 PILVLSQNTKRXSGRKVQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDGNA 334
P+LVLS + KR SG KV NI A K AD+I T LGP++MLKML+D GG V+T DGNA
Sbjct: 4 PVLVLSDSLKRESGSKVHHGNIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTNDGNA 63
Query: 335 ILR 343
ILR
Sbjct: 64 ILR 66
>At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit /
TCP-1-alpha / chaperonin (CCT1) identical to
SWISS-PROT:P28769- T-complex protein 1, alpha subunit
(TCP-1-alpha) [Arabidopsis thaliana]
Length = 545
Score = 68.9 bits (161), Expect = 4e-12
Identities = 31/77 (40%), Positives = 48/77 (62%)
Frame = +3
Query: 348 IXVQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQA 527
+ V+HPAAK ++E+A QD VG GTTSV ++A +L A + IHPT II YR A
Sbjct: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
Query: 528 LEDAIVLLQDKISVPVD 578
+ ++ +++K+ V+
Sbjct: 128 MRESCKYIEEKLVTKVE 144
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +2
Query: 185 RXSGRKVQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDGNAILR 343
R SG+ V+ +N+ A + ++++ T LGP + KML+D +G +T DG ILR
Sbjct: 14 RQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILR 66
>At3g18190.1 68416.m02314 chaperonin, putative similar to
SWISS-PROT:P50991- T-complex protein 1, delta subunit
(TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 536
Score = 65.3 bits (152), Expect = 5e-11
Identities = 34/78 (43%), Positives = 48/78 (61%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
V PAAK ++E++++QD G GTT+V V+AG +L LT IHPTVI +A
Sbjct: 79 VLQPAAKMLVELSKSQDSAAGDGTTTVVVIAGALLKECQSLLTNGIHPTVISDSLHKACG 138
Query: 534 DAIVLLQDKISVPVDLXD 587
AI +L ++VPV+L D
Sbjct: 139 KAIDIL-TAMAVPVELTD 155
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 203 VQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDGNAIL 340
++ NI++ + +D + T LGP+ M KM+ G ++T DG IL
Sbjct: 29 IRFANINSARAVSDAVRTSLGPKGMDKMISTANGEVIITNDGATIL 74
>At3g11830.1 68416.m01450 chaperonin, putative similar to
SWISS-PROT:P80313 T-complex protein 1, eta subunit
(TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 557
Score = 65.3 bits (152), Expect = 5e-11
Identities = 32/94 (34%), Positives = 53/94 (56%)
Frame = +3
Query: 348 IXVQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQA 527
+ + HPAAK +++IA++QD VG GTT+V +LA L A PF+ +H +IR YR A
Sbjct: 72 LDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPFIEDGVHAQNLIRSYRTA 131
Query: 528 LEDAIVLLQDKISVPVDLXDXXXXXXVIRSCVGT 629
AI +++ ++V ++ ++ C T
Sbjct: 132 STLAIAKVKE-LAVSIEGKSVEEKKGLLAKCAAT 164
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 158 ILVLSQNTKRXSGRKVQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDGNAI 337
I++L + T G+ + NI+A DV+ T LGP+ M K++ D G ++ DG I
Sbjct: 9 IILLKEGTDTSQGKAQLVSNINACTAVGDVVRTTLGPRGMDKLIHDDKGSVTISNDGATI 68
Query: 338 LR 343
++
Sbjct: 69 MK 70
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 63.7 bits (148), Expect = 2e-10
Identities = 30/64 (46%), Positives = 41/64 (64%)
Frame = +3
Query: 348 IXVQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQA 527
+ + +PAAK +++I++ QD+ VG GTTSV VLAG +L A + IHP II YR A
Sbjct: 69 LHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGYRMA 128
Query: 528 LEDA 539
E A
Sbjct: 129 SECA 132
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 55.2 bits (127), Expect = 5e-08
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Frame = +3
Query: 348 IXVQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQA 527
+ +QHPAAK ++ A+ Q E +G G AG +L A + +HP+ II Y +A
Sbjct: 76 LEIQHPAAKLLVLAAKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEIISGYTKA 135
Query: 528 LEDAIVLLQDKISVPVDLXDXXXXXXVI---RSCVGTXYIGR 644
+ A+ +L+ + + D VI R+ V + G+
Sbjct: 136 VSKAVEILEQLVETGSETMDVRNKDEVISRMRAAVASKQFGQ 177
>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 459
Score = 52.4 bits (120), Expect = 4e-07
Identities = 31/92 (33%), Positives = 50/92 (54%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
V + AK M+E++R+QD +G GTT V V+AG +L A L + IHP I Y A
Sbjct: 3 VDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASR 62
Query: 534 DAIVLLQDKISVPVDLXDXXXXXXVIRSCVGT 629
A+ L ++I+ + D ++++C+ T
Sbjct: 63 VAVEHL-ERIAQKFEF-DVNNYEPLVQTCMTT 92
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 52.4 bits (120), Expect = 4e-07
Identities = 31/92 (33%), Positives = 50/92 (54%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
V + AK M+E++R+QD +G GTT V V+AG +L A L + IHP I Y A
Sbjct: 79 VDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASR 138
Query: 534 DAIVLLQDKISVPVDLXDXXXXXXVIRSCVGT 629
A+ L ++I+ + D ++++C+ T
Sbjct: 139 VAVEHL-ERIAQKFEF-DVNNYEPLVQTCMTT 168
Score = 48.4 bits (110), Expect = 6e-06
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 134 FKMYGXXPILVLSQNTK-RXSGRKVQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGX 310
F +G I++ Q+ K R G Q NI+AGK A ++ + LGP+ M KML P G
Sbjct: 5 FDEFGRPFIILREQDQKTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGPDGDI 64
Query: 311 VMTXDGNAIL 340
+T DG IL
Sbjct: 65 TITNDGATIL 74
>At5g16070.1 68418.m01878 chaperonin, putative similar to
SWISS-PROT:P80317 T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
+Q+P A + A QD+ G GTTS + G ++ + + + +HP V++ + A
Sbjct: 68 IQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKR 127
Query: 534 DAIVLLQDKISVPVDLXD 587
+ L D PV + D
Sbjct: 128 ATLQFL-DNFKTPVVMGD 144
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +2
Query: 158 ILVLSQNTKRXSGRKVQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDGNAI 337
+ VL+ N + + I+A K DV+ + LGP+ +KML+ G +T DGN +
Sbjct: 3 VRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNTL 62
Query: 338 LR 343
L+
Sbjct: 63 LK 64
>At3g02530.1 68416.m00241 chaperonin, putative similar to
SWISS-PROT:P80317- T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
+Q+P A + A QD+ G GTTS + G ++ + + + +HP V++ + A
Sbjct: 68 IQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKR 127
Query: 534 DAIVLLQDKISVPVDLXD 587
+ L D PV + D
Sbjct: 128 ATLQFL-DTFKTPVVMGD 144
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +2
Query: 158 ILVLSQNTKRXSGRKVQLENISAGKXXADVIXTCLGPQAMLKMLMDPMGGXVMTXDGNAI 337
+ VL+ N + + I+A K DV+ + LGP+ +KML+ G +T DGN +
Sbjct: 3 VRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNTL 62
Query: 338 LR 343
L+
Sbjct: 63 LK 64
>At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative similar to chaperonin containing TCP-1 (CCT)
epsilon subunit [Tetrahymena pyriformis] GI:15824416,
SP|P80316 T-complex protein 1, epsilon subunit
(TCP-1-epsilon) (CCT-epsilon) {Mus musculus}
Length = 142
Score = 34.7 bits (76), Expect = 0.080
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 134 FKMYGXXPILVLSQNTK-RXSGRKVQLENISAGKXXADVIXTCLGPQAMLK 283
F +G I++ Q+ K R G Q NISAGK A ++ + LGP+ M K
Sbjct: 5 FDEFGRPFIILREQDQKTRLKGIDAQKANISAGKAVARILRSSLGPKGMEK 55
>At5g56500.1 68418.m07051 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 597
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
V++ AK + + A ++ G GTT+ VLA ++A + +P +I R + +
Sbjct: 117 VENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTK 176
Query: 534 DAIVLLQDKISVPVD 578
A+V K+S V+
Sbjct: 177 -ALVAELKKMSKEVE 190
>At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
V++ AK + + A ++ G GTT+ VLA +A + +P +I R + +
Sbjct: 121 VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAK 180
Query: 534 DAIVLLQDKISVPVD 578
A+V K+S V+
Sbjct: 181 -ALVTELKKMSKEVE 194
>At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
V++ AK + + A ++ G GTT+ VLA +A + +P +I R + +
Sbjct: 121 VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAK 180
Query: 534 DAIVLLQDKISVPVD 578
A+V K+S V+
Sbjct: 181 -ALVTELKKMSKEVE 194
>At5g18820.1 68418.m02236 chaperonin, putative similar to
SWISS-PROT:P08926- RuBisCO subunit binding-protein alpha
subunit, chloroplast precursor (60 kDa chaperonin alpha
subunit, CPN-60 alpha)[Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 575
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
+++ A + E+A +E G GTT+ +LA M+ + + + + ++
Sbjct: 97 IENAGATLIQEVAIKMNESAGDGTTTAIILAREMIKAGSLAIAFGANAVSVKNGMNKTVK 156
Query: 534 DAIVLLQDKISVPV 575
+ + +LQ K S+PV
Sbjct: 157 ELVRVLQMK-SIPV 169
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIREYRQALE 533
+++ A + E+A ++ G GTT+ +LA ++ +T +P + R + ++
Sbjct: 110 MENAGAALIREVASKTNDSAGDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKTVQ 169
Query: 534 DAIVLLQDK 560
I LQ K
Sbjct: 170 GLIEELQKK 178
>At3g13470.1 68416.m01695 chaperonin, putative similar
SWISS-PROT:P21240- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Arabidopsis thaliana]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 596
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 354 VQHPAAKSMIEIARTQDEXVGXGTTSVXVLAGXMLAXAXPFLTQNIHPTVIIR 512
V++ AK + + A ++ G GTT+ VLA +A + +P +I R
Sbjct: 117 VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITR 169
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,803,195
Number of Sequences: 28952
Number of extensions: 162386
Number of successful extensions: 234
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2009406400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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