Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_A04
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0508 + 4027113-4028522                                           30   2.8  
06_01_0927 - 7155348-7155753,7156053-7156252,7156401-7156501,715...    29   4.9  
02_05_0092 + 25749070-25750638                                         29   4.9  
02_01_0752 - 5583757-5584092                                           29   6.5  
01_01_0771 - 5982826-5983327,5983424-5984772                           29   6.5  

>12_01_0508 + 4027113-4028522
          Length = 469

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = -1

Query: 505 PVVDVATGGLA---TSTGFPFSLTNSVTV 428
           PV   ATGG A   TSTGFPFS++ ++ V
Sbjct: 60  PVEGAATGGRASHRTSTGFPFSVSLNLAV 88


>06_01_0927 -
           7155348-7155753,7156053-7156252,7156401-7156501,
           7156646-7156862
          Length = 307

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +1

Query: 616 LIFSDEFEKNSLKDLTSWGAEVRFPEXPDYP 708
           +IF DE     LK+LTS G E  FP  P  P
Sbjct: 173 VIFVDETPVRVLKNLTSRGPEFEFPAKPMRP 203


>02_05_0092 + 25749070-25750638
          Length = 522

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 480 PPVATSTTGPLQIPQQASTPIVRPEQTCQTSETVVQGP 593
           PP  T +  P+ I   ++ P V P Q    SET    P
Sbjct: 106 PPAVTPSVAPVYIQMPSANPAVAPVQIQMPSETAASVP 143


>02_01_0752 - 5583757-5584092
          Length = 111

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 586 WTTVSDVWHVCSGLTIGVLACWGICSGP 503
           W  V  VWH C     G++ C G+   P
Sbjct: 84  WPPVVAVWHSCDNYVCGLVGCVGVDREP 111


>01_01_0771 - 5982826-5983327,5983424-5984772
          Length = 616

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 440 FCYSPFAVIXPISEAILDYIRPEINLISQF 351
           FCY+ FAV  P++     Y+R E+  ++ F
Sbjct: 132 FCYTEFAVEIPVAGGSFAYLRVELGDVAAF 161


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,677,916
Number of Sequences: 37544
Number of extensions: 455666
Number of successful extensions: 1206
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)