Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_A02
         (868 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   7.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   7.2  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    22   7.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   9.5  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   9.5  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 715 RGHDXGXECLSVSADGNRFASGSWD 789
           RGH+     L+   D N ++ GS+D
Sbjct: 241 RGHEIAVFSLTHKEDPNYWSQGSYD 265


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 715 RGHDXGXECLSVSADGNRFASGSWD 789
           RGH+     L+   D N ++ GS+D
Sbjct: 248 RGHEIAVFSLTHKEDPNYWSQGSYD 272


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +2

Query: 371 EKGVSTEDTLEVEYLER 421
           ++ ++  DTL+++YLER
Sbjct: 34  DRPITFNDTLQMKYLER 50


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 790 YPSSHLQNGYRQPTQTDIQXPXRDHGK 710
           +P + + NGY  P  +    P   +GK
Sbjct: 126 HPYTVISNGYSSPMSSGSYDPYSPNGK 152


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +2

Query: 392 DTLEVEYLER 421
           DTLE++YLER
Sbjct: 41  DTLEMKYLER 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,691
Number of Sequences: 336
Number of extensions: 3362
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)