Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_A02
(868 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 59 9e-10
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 38 0.002
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 36 0.007
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 36 0.010
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 35 0.013
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 35 0.017
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 34 0.030
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 34 0.030
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 33 0.053
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 33 0.053
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 33 0.070
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 32 0.092
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 31 0.16
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 31 0.16
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 31 0.16
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 31 0.21
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 31 0.28
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 31 0.28
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 30 0.37
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 30 0.37
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 30 0.37
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 30 0.49
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 30 0.49
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 30 0.49
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 30 0.49
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 29 0.65
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 29 0.65
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 29 0.65
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 29 0.86
SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyc... 29 0.86
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 29 0.86
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 29 1.1
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 28 2.0
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 27 2.6
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 27 3.5
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 27 4.6
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 27 4.6
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 26 8.0
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 26 8.0
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 58.8 bits (136), Expect = 9e-10
Identities = 32/88 (36%), Positives = 51/88 (57%)
Frame = +2
Query: 155 SAXLQVXFITKQAQYAVPDSPYAIQCNVXPADLNTLINAILKXPSPSFEKAVIFDFLVCG 334
S +QV F T+ AV D+P + ++ L+ ++N +LK EK FDFLV G
Sbjct: 8 SGQVQVRFTTRNEDLAVGDTPIFVPTSLKRYGLSQIVNHLLKT-----EKPTPFDFLVQG 62
Query: 335 XLLCASLAEHLQEKGVSTEDTLEVEYLE 418
LL +L E++ + G+STE L++EY++
Sbjct: 63 QLLKTTLDEYIVQNGLSTESILDIEYIQ 90
Score = 50.8 bits (116), Expect = 2e-07
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 417 KGSLXPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAV 596
+ +L P HDDW+S +Q S IL+ SYD +W G+ K G S +K+
Sbjct: 90 QSTLPPAYLASFSHDDWISGIQLTSDTILTSSYDGIARVWDKSGEIKFQSTGCGSSLKSA 149
Query: 597 SW 602
SW
Sbjct: 150 SW 151
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAV 596
H D V + S+ ++SGS D ++ +W G ++ + GHT PV +V
Sbjct: 352 HTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSV 398
Score = 33.1 bits (72), Expect = 0.053
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +3
Query: 342 FVPPSQSTYKKKGYRQRTRLRSNTWKGSLXPTPQDCLMHDDWVSAVQAHSSWILSGSYDN 521
F P ++ K+ Y +R R+ N G H D V +Q + + SGSYD
Sbjct: 236 FFLPFKTRPWKEVYAERCRVECNWRHGRCRQVVLSG--HSDGVMCLQLVRNILASGSYDA 293
Query: 522 SLHIWSTKGQHKLA-IPGHTSPVKAVSW 602
++ +W+ ++A + GH+S V + +
Sbjct: 294 TIRLWNLATFQQVALLEGHSSGVTCLQF 321
Score = 30.3 bits (65), Expect = 0.37
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKAVSWVS 608
H V+ +Q ++SGS D ++ IW+ + ++I GHT V +++ S
Sbjct: 312 HSSGVTCLQFDQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDS 363
Score = 29.9 bits (64), Expect = 0.49
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
DQ +SGS D+T +W + +C+ GH CL+ D SGS D
Sbjct: 322 DQCKLISGSMDKTIRIWNYRTS----ECISILHGHTDSVLCLTF--DSTLLVSGSAD 372
Score = 26.2 bits (55), Expect = 6.0
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
D VSGS D T LW ++ + IT RGH + + D SGS D
Sbjct: 362 DSTLLVSGSADCTVKLWHFSGGKR-----ITLRGHTGPVNSVRIIRDRGLVLSGSDD 413
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 35.9 bits (79), Expect = 0.007
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 456 HDDWVSAVQAH--SSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVS 599
H D++ +V WI+SGS D ++ WS H +L + GH + V +V+
Sbjct: 511 HKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVA 561
Score = 29.9 bits (64), Expect = 0.49
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +1
Query: 565 YQVIHHQ*KQYHGFPSXGDQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECL 744
Y+++ ++ + D T VSGS D+T L W+V ++ D G +
Sbjct: 369 YRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCL--WDVEAGEQKLIL---HTDDGVTTV 423
Query: 745 SVSADGNRFASGSWDKM 795
S DG A+GS DK+
Sbjct: 424 MFSPDGQFIAAGSLDKV 440
Score = 29.9 bits (64), Expect = 0.49
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILW----VWNVPRNPVD----CMITYRGHDXGXECLSVSADGNRFA 774
D VSGS D T LW V NV + C T+ GH ++VS DG
Sbjct: 469 DGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWII 528
Query: 775 SGSWDKMFVF 804
SGS D+ F
Sbjct: 529 SGSKDRTIQF 538
Score = 29.1 bits (62), Expect = 0.86
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 441 QDCLMH-DDWVSAVQ--AHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 602
Q ++H DD V+ V +I +GS D + IW++ G + GH V +V++
Sbjct: 410 QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAF 466
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 35.5 bits (78), Expect = 0.010
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 498 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSW 602
+ SGS DN++ IW+ K + L + GHT+P+ V W
Sbjct: 242 LASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRW 277
Score = 32.3 bits (70), Expect = 0.092
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 489 SSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSW 602
S ++S S D +L +W + + K +PGH V AV W
Sbjct: 443 SRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDW 481
Score = 31.1 bits (67), Expect = 0.21
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 492 SWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVS 599
+WI S SYD ++ IW K G+ + GH + V +S
Sbjct: 281 NWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLS 317
Score = 28.7 bits (61), Expect = 1.1
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
D VS S D T L VW+V + + GH+ + S DG R ASG DK
Sbjct: 442 DSRLLVSSSQDTT--LKVWDVRSKKMKFDLP--GHEDQVFAVDWSPDGQRVASGGADK 495
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 35.1 bits (77), Expect = 0.013
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 637 SGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
+GS D I ++W+V + + T GH+ LS ++ G+ ASGSWDK
Sbjct: 441 AGSQDSFEI-FMWSVQTGQL--LETLAGHEGPVSSLSFNSSGSLLASGSWDK 489
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 34.7 bits (76), Expect = 0.017
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 456 HDDWVS--AVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAV 596
H D+V AV S W LSGS D S+ W + GQ L GH + V +V
Sbjct: 537 HTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISV 586
Score = 29.9 bits (64), Expect = 0.49
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
+SGS D++ W ++ + C +GH + S DG +FASGS D
Sbjct: 554 LSGSKDRSMQFWDLQTGQSYLTC----QGHKNSVISVCFSPDGRQFASGSGD 601
Score = 28.7 bits (61), Expect = 1.1
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRN-------PVD-CMITYRGHDXGXECLSVSADGNRFA 774
D + +SGS D+T +W R+ P C TY GH ++VS D
Sbjct: 495 DSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGL 554
Query: 775 SGSWDKMFVF 804
SGS D+ F
Sbjct: 555 SGSKDRSMQF 564
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +3
Query: 474 AVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 602
A+ + +I GS D + +WS G + GH V ++++
Sbjct: 450 AISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAF 492
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 33.9 bits (74), Expect = 0.030
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECL--SVSADGNRFASGSWDK 792
D VSGS D+T + +WN+ N IT GH C+ S + D F S WDK
Sbjct: 116 DNRQVVSGSRDKT--IKIWNIIGN-CKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDK 172
Score = 32.7 bits (71), Expect = 0.070
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYR---GHDXGXECLSVSADGNRFASGSWDK 792
+SGS D++ IL WN+ R+ V+ + R GH ++S D + S SWDK
Sbjct: 32 LSGSRDKSIIL--WNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDK 85
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 456 HDDWVS--AVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVS 599
H +VS A+ S + LS S+D ++ +W KG+ GHTS V +VS
Sbjct: 62 HSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVS 112
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
+S S D+T LW ++ + +C + GH +S+S D + SGS DK
Sbjct: 79 LSASWDKTIRLW--DLEKG--ECTHQFVGHTSDVLSVSISPDNRQVVSGSRDK 127
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +1
Query: 604 FPSXGDQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGS 783
F D TFVS D+ +W ++ GH +++S DG+ ASG
Sbjct: 156 FSPNPDNLTFVSAGWDKAVKVW----DLETFSLRTSHYGHTGYVSAVTISPDGSLCASGG 211
Query: 784 WD 789
D
Sbjct: 212 RD 213
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 33.9 bits (74), Expect = 0.030
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 471 SAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAV 596
SA +S I++GS+D++ +W+ GQ K + GH S V AV
Sbjct: 103 SASALNSETIITGSWDSTARVWAL-GQCKYVLKGHQSSVWAV 143
Score = 30.3 bits (65), Expect = 0.37
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 450 LMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQ 614
L H+D V ++ S S D + +W++ G+ + GHTS V +++++ Q
Sbjct: 173 LAHNDCVRSLCQIPGGFASCSNDGVIKLWTSDGEFLYELHGHTSFVYSLTYIHNQ 227
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 33.1 bits (72), Expect = 0.053
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAV 596
H D V + + ++SGSYD+S+ IW + G+ + GH+ + +V
Sbjct: 506 HTDSVRTISGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSV 553
Score = 30.7 bits (66), Expect = 0.28
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAV 596
H + V AV+ H + ++SGS D ++ +W+ K + GH S ++ +
Sbjct: 390 HKEGVWAVKIHENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCL 437
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 628 TFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSV 750
T VSGS D+T + VWN+ + C +RGH CL +
Sbjct: 403 TLVSGSIDKT--VRVWNIEK--AKCTHIFRGHISIIRCLEI 439
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/47 (23%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKA 593
HD +V+ + + ++SGS D+++ IW G+ + +P ++ + +
Sbjct: 588 HDAFVTLLNVFQNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYISS 634
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
VSGS+D + + +W V +C+ RGH + + N SGS DK
Sbjct: 521 VSGSYDSS--IRIWRVSTG--ECLYHLRGHSLRIYSVLYEPERNICISGSMDK 569
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 33.1 bits (72), Expect = 0.053
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 486 HSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 602
+S ++ +GS D ++++WS G + +PGH V V +
Sbjct: 280 NSRFVGAGSSDKNVYVWSATGDLRYVLPGHEGSVNHVDF 318
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 32.7 bits (71), Expect = 0.070
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +3
Query: 447 CLM-HDDWVSAVQAH--SSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVS 599
CL H ++VS++ + + ++SGS+D ++ IW+ + G +P H+ P+ +VS
Sbjct: 133 CLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVS 187
Score = 30.7 bits (66), Expect = 0.28
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDKM 795
VSGS D+T + +WN+ C+ H +S+SADG A+ S+D M
Sbjct: 154 VSGSWDET--VRIWNLQDGT--CLRMLPAHSEPIISVSISADGTLCATASYDGM 203
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 474 AVQAHSSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVS 608
+V + WI + S D ++ IWS + + + GH + V W +
Sbjct: 61 SVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWAT 106
Score = 26.2 bits (55), Expect = 6.0
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 637 SGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
S S D+T +W + R V C+ +GH + + G SGSWD+
Sbjct: 113 SASDDKTIRIWDFE-KRCSVRCL---KGHTNYVSSIDFNPLGTLLVSGSWDE 160
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 32.3 bits (70), Expect = 0.092
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWSTK 545
H +S++Q S+ + SGSYDNS+ IW +
Sbjct: 535 HTAPISSLQFDSNHLYSGSYDNSVRIWDLR 564
Score = 29.5 bits (63), Expect = 0.65
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWS 539
H D+VS + S+I +GS D ++ +W+
Sbjct: 373 HSDYVSCLAIQDSFIATGSMDTTVRLWN 400
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 31.5 bits (68), Expect = 0.16
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Frame = +3
Query: 432 PTPQDCLM---HDDWVSAVQAHSS---WILSGSYDNSLHIWSTK 545
P +DCL H D+V+++ H + LSGS D L +WS K
Sbjct: 337 PVRKDCLCCFEHSDFVTSIAFHPKDDRFFLSGSLDCKLRLWSIK 380
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 31.5 bits (68), Expect = 0.16
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 498 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQ 614
+ SG DN+L +W + L HT+ VKA+ W Q
Sbjct: 264 LASGGNDNNLFVWDYRSSRPLHKFEEHTAAVKAIGWSPHQ 303
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 31.5 bits (68), Expect = 0.16
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 456 HDDWVSAVQAH--SSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVS 599
H WV V + W +G+ D ++ IW G KL + GH + V+ ++
Sbjct: 162 HLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLA 212
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 474 AVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVS 599
AVQ +++GS D+++ +W G+ + H V+A+S
Sbjct: 296 AVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALS 338
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 31.1 bits (67), Expect = 0.21
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIW--STKGQHKLAIPGHTSPVKAVSWVSFQXRSSY 629
H+D + V+ + I+SG YD ++ IW +T QH + H S V + F R
Sbjct: 428 HEDLIRTVRFNDEKIVSGGYDGTVRIWNFNTGEQHCVL---HNSRNSRVFGLQFDHRRII 484
Query: 630 IC 635
C
Sbjct: 485 AC 486
Score = 27.5 bits (58), Expect = 2.6
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDKMF 798
D VSGS D+T + VW+V N + GH CL N SGS D
Sbjct: 230 DDEIMVSGSKDRT--VSVWDV--NSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTI 285
Query: 799 V 801
+
Sbjct: 286 I 286
Score = 26.6 bits (56), Expect = 4.6
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
VSGS D T I+W W R P+ Y GH L V N S S D
Sbjct: 277 VSGSSDSTIIIWDWQ-NRRPLK---VYFGHT--DNVLGVVVSENYIISSSRD 322
Score = 26.2 bits (55), Expect = 6.0
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 432 PTPQDCLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPV 587
P QD D V VQ ++SGS D ++ +W + L + GH+ V
Sbjct: 212 PADQDFRATLDSVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSV 264
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/53 (26%), Positives = 21/53 (39%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
+S S D TA +W + CM RGH + S+ + S D+
Sbjct: 317 ISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDR 369
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 30.7 bits (66), Expect = 0.28
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 631 FVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
FV+GS D L+++++ RN + Y+ H + S G F SGS+DK
Sbjct: 245 FVAGSEDHN--LYMYDM-RNLKRALHVYKDHVSAVMSVDFSPTGQEFVSGSYDK 295
Score = 29.1 bits (62), Expect = 0.86
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 501 LSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQXRSSYI 632
+SGSYD ++ I++ + H + HT ++ V+ V F + YI
Sbjct: 289 VSGSYDKTIRIYNVREGHSRDV-YHTKRMQRVTAVKFSMDAQYI 331
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 30.7 bits (66), Expect = 0.28
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 498 ILSGSYDNSLHIWSTKGQ-HKLAIPGHTSPVKAVSWVSFQ 614
+ SG DN + IW + K H + VKAV+W +Q
Sbjct: 319 LASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQ 358
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 30.3 bits (65), Expect = 0.37
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 492 SWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQ 614
S++LSGS D ++ +W+ K + + IP S V+A+ WV+ Q
Sbjct: 202 SFLLSGSRDKTVQVWNIKKRSAVRTIPVFHS-VEAIGWVNGQ 242
Score = 29.1 bits (62), Expect = 0.86
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 465 WVSAVQAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVS 608
W + S + SGS D ++ IW+ Q + + GHT + + ++S
Sbjct: 511 WACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYIS 559
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 610 SXGDQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGH 723
S D +G+ D T LW N+ N C+ + GH
Sbjct: 372 SSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGH 409
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 709 TYRGHDXGXECLSVSADGNRFASGSWDK 792
T + HD + VS DG AS S DK
Sbjct: 460 TIKAHDRDVNAIQVSKDGRIIASASQDK 487
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Frame = +3
Query: 495 WILSGSYDNSLHIWSTKGQHKL-----AIPGHTSPVKAVS 599
W+ +G+ DN++ +W+ + + GHT+ V AV+
Sbjct: 378 WLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVA 417
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 30.3 bits (65), Expect = 0.37
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 489 SSWILSGSYDNSLHIWSTKGQHK--LAIPGHTSPVKAVSWVSFQXRS 623
+SW + S+DNS+ +W G++K + + S + + W+S R+
Sbjct: 354 ASWNIYNSFDNSMVLWCPYGKNKTLICLLNFQSSLLSFEWISIISRA 400
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 30.3 bits (65), Expect = 0.37
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLS 747
++ +SGS D + I VW+V P + GH G EC++
Sbjct: 143 EEGLLLSGSTDASLI--VWDVSSQPSRLLYKLTGHSRGIECIT 183
Score = 26.2 bits (55), Expect = 6.0
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Frame = +3
Query: 414 WKGSLXPTPQDCLMHDDWVSAVQA--HSSWILSGSYDNSLHIWSTKGQHK---LAIPGHT 578
W S + + H D+V + +LSGS D SL +W Q + GH+
Sbjct: 117 WNVSTGECVETLIGHTDYVKCLLLLEEEGLLLSGSTDASLIVWDVSSQPSRLLYKLTGHS 176
Query: 579 SPVKAVS 599
++ ++
Sbjct: 177 RGIECIT 183
Score = 25.8 bits (54), Expect = 8.0
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 637 SGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDKMFV 801
+GS D T + WNV +C+ T GH +CL + + SGS D +
Sbjct: 107 TGSWDHT--IKKWNVSTG--ECVETLIGHTDYVKCLLLLEEEGLLLSGSTDASLI 157
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 29.9 bits (64), Expect = 0.49
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 456 HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKAVSW 602
H D+V H WILS S D ++ IW+ + ++ +AI GH+ V ++
Sbjct: 94 HMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAF 145
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 29.9 bits (64), Expect = 0.49
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 721 HDXGXECLSVSADGNRFASGSWDKMF 798
H G C+S N F SGSWDK F
Sbjct: 94 HGKGVSCISKLRLENCFISGSWDKSF 119
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 29.9 bits (64), Expect = 0.49
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +1
Query: 604 FPSXGDQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGS 783
FP G +SGS D +W R+ + T++GH LS S DG F S S
Sbjct: 275 FPISGH--LLLSGSMDNQIKIWEVYHDRS---LLRTFQGHARPIRDLSFSQDGRSFLSTS 329
Query: 784 WDK 792
+DK
Sbjct: 330 FDK 332
Score = 29.1 bits (62), Expect = 0.86
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 498 ILSGSYDNSLHIWSTKGQHKL--AIPGHTSPVKAVSW 602
+LSGS DN + IW L GH P++ +S+
Sbjct: 282 LLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSF 318
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 29.9 bits (64), Expect = 0.49
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1
Query: 691 PVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
P C + GH CLSV GN ASG D
Sbjct: 368 PTRCTNVFIGHKGRVRCLSVHVSGNWLASGGDD 400
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 29.5 bits (63), Expect = 0.65
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Frame = +3
Query: 444 DCLM----HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQH---KLAIPGHTSPVKAV 596
DCL H V V H + ++SGSYDNS+ W G + GHT+ V A+
Sbjct: 414 DCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICFWRDDGDDWALTCQLQGHTNTVWAL 473
Query: 597 SW 602
++
Sbjct: 474 AF 475
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 697 DCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
+C GH+ +C++ S +GN A+ S DK
Sbjct: 369 ECTAALEGHENEVKCIAWSCNGNYLATCSRDK 400
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 29.5 bits (63), Expect = 0.65
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 414 WKGSLXPTPQDCLMHDDWV-SAVQAHSSWILSGSYDNSLHIWSTK 545
W S D H+D+V +A ++ ++SG YD ++ +W T+
Sbjct: 151 WDLSTGAVQYDLSGHEDYVRTASWMSATRLVSGGYDGTIRLWDTR 195
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 29.5 bits (63), Expect = 0.65
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 718 GHDXGXECLSVSADGNRFASGSWDK 792
GH+ L++++DG A+GSWD+
Sbjct: 272 GHENRISSLALTSDGTMLATGSWDE 296
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 29.1 bits (62), Expect = 0.86
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 631 FVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
F + SHDQTA L W+V + + GH +C+S + A+GS D
Sbjct: 460 FATASHDQTARL--WDVEH--AAPLRVFVGHQNDVDCVSFHPNAAYLATGSSD 508
>SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 29.1 bits (62), Expect = 0.86
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -2
Query: 744 QTFXSLVVTTVSDHTVNRISRYIPY 670
Q+ +++VTT + T N +S+Y+PY
Sbjct: 79 QSIENMIVTTKAGQTENALSKYLPY 103
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 29.1 bits (62), Expect = 0.86
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 492 SWILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAVSWVSFQXRSSY 629
+++LSGS D+ + IW + LA + GH VK V++V++ Y
Sbjct: 441 TFVLSGSEDDKIRIWHRESGKLLATLSGH---VKCVNYVAYNPVDPY 484
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIW-STKGQHKLAIPGHTSPVKAVS 599
H D V V I+S SYD +L +W ++ G + GH V +V+
Sbjct: 576 HTDSVREVACLGDLIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVT 624
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 712 YRGHDXGXECLSVSADGNRFASGSWD-KMFVF 804
Y GH C++++ DG R +GS D ++ VF
Sbjct: 364 YTGHQEPILCMAITPDGKRVVTGSDDTELLVF 395
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 631 FVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
F + SHDQTA LW + + + + GH +C++ + +GS DK
Sbjct: 436 FATASHDQTAQLW----SCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDK 485
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = +3
Query: 468 VSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAIPG---HTSPVKAVS 599
V ++ AHS W+LSG + + ++ST+ Q + HT+PV ++
Sbjct: 191 VYSLAAHSRGLWVLSGVNNGDIILYSTRHQEGYPVTSLKKHTAPVSCLA 239
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 721 HDXGXECLSVSADGNRFASGSWDKMFVF 804
H CL++ + SGSWDKM +
Sbjct: 231 HTAPVSCLALHGSEKKVLSGSWDKMVYY 258
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 465 WVSAVQAHSSWILSGSYDNSLHIWSTK 545
W + S+ ++SG+ DN++ +W K
Sbjct: 56 WTCDINKSSTLMVSGAADNTMRLWDVK 82
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 495 WILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSW 602
+I+SG L + ST+ G+ + GHTSPV++V++
Sbjct: 159 FIVSGHQTGQLFLISTETGRLFHVLSGHTSPVRSVAF 195
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIW 536
H V A+ ++++SGS+D+S+ +W
Sbjct: 659 HHSEVWALAVGPTFVVSGSHDHSIRLW 685
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 447 CLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHK---LAIPGHTSPVKAVSWVSF 611
C+ DW A ++LSGS D L +W ++K L GH + + +V +
Sbjct: 47 CVNTLDW----SADGEFLLSGSDDTRLIVWDVFNEYKPRHLISTGHVQNIFSAKFVPY 100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,073,622
Number of Sequences: 5004
Number of extensions: 57276
Number of successful extensions: 304
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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