Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_A02
(868 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57108| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 42 5e-04
SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 42 5e-04
SB_26977| Best HMM Match : WD40 (HMM E-Value=1.9e-10) 41 0.001
SB_46201| Best HMM Match : WD40 (HMM E-Value=0) 38 0.011
SB_10223| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_36541| Best HMM Match : WD40 (HMM E-Value=0) 36 0.043
SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.075
SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.075
SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_39595| Best HMM Match : WD40 (HMM E-Value=1.10001e-40) 33 0.40
SB_40171| Best HMM Match : WD40 (HMM E-Value=0.00071) 33 0.40
SB_5414| Best HMM Match : WD40 (HMM E-Value=6.6e-15) 33 0.40
SB_34659| Best HMM Match : WD40 (HMM E-Value=1.1e-34) 32 0.53
SB_53604| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.70
SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17) 32 0.70
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_42943| Best HMM Match : WD40 (HMM E-Value=0) 31 1.6
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 31 1.6
SB_55678| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_46881| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14) 31 1.6
SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21) 31 1.6
SB_22042| Best HMM Match : WD40 (HMM E-Value=6.1e-13) 31 1.6
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_53611| Best HMM Match : Homeobox (HMM E-Value=1.2e-25) 30 2.1
SB_29857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_23517| Best HMM Match : WD40 (HMM E-Value=0) 30 2.1
SB_57199| Best HMM Match : 7tm_1 (HMM E-Value=0) 30 2.1
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_35846| Best HMM Match : Baculo_p24 (HMM E-Value=1.6) 29 4.9
SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32) 29 4.9
SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18) 29 4.9
SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22) 29 6.5
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_8765| Best HMM Match : WD40 (HMM E-Value=3.9e-15) 29 6.5
SB_56777| Best HMM Match : SmpA_OmlA (HMM E-Value=1.8) 29 6.5
SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30) 28 8.6
SB_10756| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_9416| Best HMM Match : WD40 (HMM E-Value=0) 28 8.6
SB_6763| Best HMM Match : WD40 (HMM E-Value=4.6e-24) 28 8.6
SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_18573| Best HMM Match : WD40 (HMM E-Value=1.5e-06) 28 8.6
SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35) 28 8.6
>SB_57108| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 243
Score = 42.3 bits (95), Expect = 5e-04
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
D VSGS D+T + VW++ R ++T GH CL++ +GNR SGS D+
Sbjct: 35 DDTRIVSGSSDKT--IKVWDLSREDTSAVLTLAGHSGTVRCLNL--NGNRLVSGSVDR 88
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
D VSGS+D+T L VW++ +C +T RGH+ C V D ++ SGS+D
Sbjct: 93 DDEKVVSGSYDKT--LKVWDIKTG--NCKLTLRGHNAAVLC--VQFDESKIVSGSYD 143
Score = 34.7 bits (76), Expect = 0.099
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 474 AVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSW 602
+++ ++SGSYD +L +W K G KL + GH + V V +
Sbjct: 89 SIKVDDEKVVSGSYDKTLKVWDIKTGNCKLTLRGHNAAVLCVQF 132
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 670 VWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDKMFVF 804
VW++ C++T GH CL+++ D + SGS D F
Sbjct: 194 VWSLVEG--SCLMTLAGHHDAVTCLNLTLDRRKVISGSLDHNLKF 236
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHK---LAIPGHTSPVKAVS 599
H +S VQ + I+SGS D ++ +W + L + GH+ V+ ++
Sbjct: 25 HTQGISCVQFDDTRIVSGSSDKTIKVWDLSREDTSAVLTLAGHSGTVRCLN 75
>SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 870
Score = 42.3 bits (95), Expect = 5e-04
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
D VSGS D+T + VW++ R ++T GH CL++ +GNR SGS D+
Sbjct: 662 DDTRIVSGSSDKT--IKVWDLSREDTSAVLTLAGHSGTVRCLNL--NGNRLVSGSVDR 715
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
D VSGS+D+T L VW++ +C +T RGH+ C V D ++ SGS+D
Sbjct: 720 DDEKVVSGSYDKT--LKVWDIKTG--NCKLTLRGHNAAVLC--VQFDESKIVSGSYD 770
Score = 34.7 bits (76), Expect = 0.099
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 474 AVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSW 602
+++ ++SGSYD +L +W K G KL + GH + V V +
Sbjct: 716 SIKVDDEKVVSGSYDKTLKVWDIKTGNCKLTLRGHNAAVLCVQF 759
Score = 31.9 bits (69), Expect = 0.70
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +3
Query: 372 KKGYRQRTRLRSNTWKGSLXPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQ 551
KK + +R LR N G + H +S VQ + I+SGS D ++ +W +
Sbjct: 626 KKMFAERFLLRKNWLNGRCDVRTFEG--HTQGISCVQFDDTRIVSGSSDKTIKVWDLSRE 683
Query: 552 HK---LAIPGHTSPVKAVS 599
L + GH+ V+ ++
Sbjct: 684 DTSAVLTLAGHSGTVRCLN 702
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 670 VWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDKMFVF 804
VW++ C++T GH CL+++ D + SGS D F
Sbjct: 821 VWSLVEG--SCLMTLAGHHDAVTCLNLTLDRRKVISGSLDHNLKF 863
>SB_26977| Best HMM Match : WD40 (HMM E-Value=1.9e-10)
Length = 345
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +1
Query: 676 NVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
N+P V+ + Y GHD CL VS DG +GSWD
Sbjct: 287 NLPTFQVERLAVYYGHDNRISCLKVSPDGTGICTGSWD 324
>SB_46201| Best HMM Match : WD40 (HMM E-Value=0)
Length = 292
Score = 37.9 bits (84), Expect = 0.011
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
V+GS D TA W N +CM T++GH+ CL+V G +GS D
Sbjct: 171 VTGSADNTAKAW----GMNSNECMNTFKGHEGAILCLAVDGKGRLLFTGSSD 218
>SB_10223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 945
Score = 37.1 bits (82), Expect = 0.019
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
D+ T VSGSHD T + VW++ +C++ +GH+ CL D SGS DK
Sbjct: 611 DENTLVSGSHDST--IRVWDM--RTWECVLVLQGHEGAVSCLEF--DAPFVLSGSADK 662
Score = 33.1 bits (72), Expect = 0.30
Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Frame = +1
Query: 625 ATFV-SGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSAD-----GNRFASGSW 786
A FV SGS D+T LW NV DC+ T RGH + V+ D G SGS
Sbjct: 652 APFVLSGSADKTIKLW--NVESG--DCLNTLRGHADAVTSVKVTLDTVQVIGELILSGSA 707
Query: 787 DKMFVF 804
D M +F
Sbjct: 708 DGMILF 713
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAV 596
H+ VS ++ + ++LSGS D ++ +W+ + G + GH V +V
Sbjct: 641 HEGAVSCLEFDAPFVLSGSADKTIKLWNVESGDCLNTLRGHADAVTSV 688
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/50 (24%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSW 602
H VS ++ + ++SGS+D+++ +W + + L + GH V + +
Sbjct: 601 HKGCVSCLRFDENTLVSGSHDSTIRVWDMRTWECVLVLQGHEGAVSCLEF 650
>SB_36541| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1070
Score = 35.9 bits (79), Expect = 0.043
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
D VSGS D+ +L VW++ DC ++ +GH +CL+ DG R SG+ D
Sbjct: 390 DGQAIVSGSEDK--VLRVWDLVSR--DC-VSLKGHGGLIKCLAAMHDGKRIVSGAKD 441
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 456 HDDWVSA--VQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVS 608
HD V+A + ++SGS D+++ +W TKG+ K + GHT+ V +S S
Sbjct: 673 HDKGVTALLIMNDCRHLVSGSKDSTIRLWDLTKGECKQVMQGHTNEVLCLSVTS 726
Score = 33.5 bits (73), Expect = 0.23
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDKM 795
+SGS D T W N C + ++GH CL + DG SGS DK+
Sbjct: 353 ISGSDDSTVRAWDLE---NGESCAV-FQGHSKPVLCLQIINDGQAIVSGSEDKV 402
Score = 31.9 bits (69), Expect = 0.70
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
D + VS S D +L VW C T GH C++++ DG SGS DK
Sbjct: 473 DDSVIVSASKDD--LLKVWRT--ESWVCTQTLIGHSSWISCVAMTTDGKTIISGSNDK 526
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 456 HDDWVSAVQAHSS-WILSGSYDNSLHIWSTKGQHKLAI-PGHTSPV 587
H+ ++A+ + W++SGS D+++ W + A+ GH+ PV
Sbjct: 337 HEGAINAILVTAKDWVISGSDDSTVRAWDLENGESCAVFQGHSKPV 382
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +3
Query: 414 WKGSLXPTPQDCLMHDDWVS--AVQAHSSWILSGSYDNSLHIWSTKGQ-HKLAI 566
W+ Q + H W+S A+ I+SGS D ++ +W T G H AI
Sbjct: 489 WRTESWVCTQTLIGHSSWISCVAMTTDGKTIISGSNDKNVKMWYTHGNAHAQAI 542
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
VSGS D T LW ++ + +C +GH CLSV+++ SGS D
Sbjct: 690 VSGSKDSTIRLW--DLTKG--ECKQVMQGHTNEVLCLSVTSNDKTIVSGSND 737
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDKM 795
D VSG+ D + VW++ R ++C T +GH ++VS D + S S D +
Sbjct: 431 DGKRIVSGAKDNN--IKVWDLVR--LECQATLKGHTSLIWAIAVSRDDSVIVSASKDDL 485
>SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 35.1 bits (77), Expect = 0.075
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 486 HSSWILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKAVSW 602
+ ++ SGS D+ ++IW K + +A+ GHT V V+W
Sbjct: 216 NQDFLASGSEDHQVYIWHVKNERPIAVLCGHTRTVNCVTW 255
>SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 35.1 bits (77), Expect = 0.075
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 360 STYKKKGYRQRTRLRSNTWKGSLXPTPQDCLMHDDWV-SAVQAHSSWILSGSYDNSLHIW 536
S YKK + + ++ N +G L P+ + HDD V + +Q S ++SGS D +L +W
Sbjct: 287 SPYKKL-FMVKQKIYWNWRRGPLRPS-KILKGHDDHVITCLQFSGSRVVSGSDDGTLKVW 344
Query: 537 ST-KGQHKLAIPGHTSPV 587
S G+ + GHT V
Sbjct: 345 SALSGKCLRTLTGHTGGV 362
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIW-STKGQHKLAIPGHTSPVKAVSW 602
H V + H ++SGS D +L +W +T G + GH + V+ V +
Sbjct: 398 HTSTVRCMDMHEEVVVSGSRDGTLRVWDTTTGNCLHVLVGHLAAVRCVKY 447
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTS 581
H + V ++Q ++I+SGS D S+ +W + GQ + GH S
Sbjct: 478 HTNRVYSLQFDGTYIVSGSLDTSIRVWHAETGQCLHTLVGHQS 520
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 465 WVSAVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAV 596
W S + H I+SGS D +L +W+ + G + GHTS V+ +
Sbjct: 363 WSSQLSGHI--IVSGSTDRTLKVWNAETGYCMHTLYGHTSTVRCM 405
>SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 492 SWILSGSYDNSLHIWSTKGQHKL--AIPGHTSPVKAVSW 602
S++ SGS DN++ IW+ + ++ I GHT VK V+W
Sbjct: 101 SFLASGSVDNTVTIWNAQKFPEVIQIIKGHTGLVKGVTW 139
>SB_39595| Best HMM Match : WD40 (HMM E-Value=1.10001e-40)
Length = 260
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 616 GDQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
G T +SGS D+TA +W+ P+ C++T GHD + + D +GS DK
Sbjct: 116 GKFGTLLSGSWDKTAKVWLG--PK----CVMTLEGHDAAVWAVLLMPDHGLMLTGSADK 168
>SB_40171| Best HMM Match : WD40 (HMM E-Value=0.00071)
Length = 155
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 471 SAVQAHSSWILSGSYDNSLHIW--STKGQHKLAIPGHTSPVKAVSW 602
+A+ +++LSGS DN+ +IW S + + + GH V +V W
Sbjct: 103 AALSPDDNYLLSGSSDNNAYIWKVSDADRPPVCLRGHAGEVTSVVW 148
>SB_5414| Best HMM Match : WD40 (HMM E-Value=6.6e-15)
Length = 490
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 471 SAVQAHSSWILSGSYDNSLHIW--STKGQHKLAIPGHTSPVKAVSW 602
+A+ +++LSGS DN+ +IW S + + + GH V +V W
Sbjct: 81 AALSPDDNYLLSGSSDNNAYIWKVSDADRPPVCLRGHAGEVTSVVW 126
>SB_34659| Best HMM Match : WD40 (HMM E-Value=1.1e-34)
Length = 292
Score = 32.3 bits (70), Expect = 0.53
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 498 ILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAVSWVSFQ 614
+ SG DN L +W+ G + HT+ VKA+SW Q
Sbjct: 161 LASGGNDNKLLVWNLSGSTPIQQYSEHTAAVKAISWSPHQ 200
>SB_53604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 486 HSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKA 593
+++WI +G +D + +WS GQ G ++P K+
Sbjct: 401 NNTWIFTGGFDKVVKVWSQDGQCMHKFDGFSAPYKS 436
>SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17)
Length = 289
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 474 AVQAHSSWILSGSYDNSLHIWSTKGQHKLA--IPGHTSPVKAVSWVS 608
A A + SGS+D S+ IW GQ A + GH S V+A+ + +
Sbjct: 94 AWDAEKRLLFSGSFDQSIIIWDIGGQQGTAFELQGHISKVQALCFAA 140
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPV 587
H V A+ H + SGS D ++ IWS + L +I GH +PV
Sbjct: 459 HTGPVWALCVHGELLFSGSSDKTIKIWSIETLELLDSIHGHENPV 503
>SB_42943| Best HMM Match : WD40 (HMM E-Value=0)
Length = 273
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 607 PSXGDQATFVSGSHDQTAILWVWNVPRNPVDCMITYR---GHDXGXECLSVSADGNRFAS 777
PS D T +S S D+ I VW + R+ + + GH+ + +S+DG S
Sbjct: 62 PSNPD--TILSSSRDKKLI--VWELTRDDANYGFAKKSLTGHNHFVSDVVMSSDGQFALS 117
Query: 778 GSWDK 792
GSWDK
Sbjct: 118 GSWDK 122
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 456 HDDWVSAVQAHSS--WILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSW 602
H+ +VS V S + LSGS+D +L +W G GHT V +V++
Sbjct: 99 HNHFVSDVVMSSDGQFALSGSWDKTLRLWDLNAGVTTRRFVGHTKDVLSVAF 150
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDKMF 798
D A V+ SHD+T LW + + + Y GH + + SG WDK
Sbjct: 50 DDAKIVTASHDKTIRLW----DASSGNQLKVYTGHTSIITSCHPNTTSRKLISGGWDKTL 105
Query: 799 V 801
+
Sbjct: 106 I 106
>SB_55678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -3
Query: 89 KGRRHNRKGPEVAKVXKEGPSRRGRRKR 6
KGR+ RKG +V KV KE R+GR++R
Sbjct: 37 KGRKE-RKGRKVRKVRKERKGRKGRKER 63
>SB_46881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -3
Query: 89 KGRRHNRKGPEVAKVXKEGPSRRGRRKR 6
KGR+ RKG +V KV KE R+GR++R
Sbjct: 77 KGRKE-RKGRKVRKVRKERKGRKGRKER 103
>SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14)
Length = 867
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 637 SGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
S ++D T LW N ++ +IT GH+ L+ SADG + A+ S DK
Sbjct: 128 SAAYDLTVKLWDINAAKS----VITLEGHNEQVFSLAWSADGKQLATFSRDK 175
>SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21)
Length = 123
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 607 PSXGDQATFVSGSHDQTAILWVWNVPRNPVDCMITYR---GHDXGXECLSVSADGNRFAS 777
PS D T +S S D+ I VW + R+ + + GH+ + +S+DG S
Sbjct: 25 PSNPD--TILSSSRDKKLI--VWELTRDDANYGFAKKSLTGHNHFVSDVVMSSDGQFALS 80
Query: 778 GSWDK 792
GSWDK
Sbjct: 81 GSWDK 85
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 456 HDDWVSAVQAHSS--WILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSW 602
H+ +VS V S + LSGS+D +L +W G GHT V +V++
Sbjct: 62 HNHFVSDVVMSSDGQFALSGSWDKTLRLWDLNAGVTTRRFVGHTKDVLSVAF 113
>SB_22042| Best HMM Match : WD40 (HMM E-Value=6.1e-13)
Length = 232
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = +1
Query: 589 KQYHGFPSXGDQATFVSGSHDQTAILWVWNVPR----NPVDCMITYRGHDXGXECLSVSA 756
KQ+ G+ +F ++D A++ N R +DC + GH CL V A
Sbjct: 128 KQFVGYNDEILDMSFAGKTNDHLAVVTNSNQLRLYNLETLDCRMV-EGHSKMILCLDVCA 186
Query: 757 DGNRFASGSWD 789
DG + +GS D
Sbjct: 187 DGTKIVTGSKD 197
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +1
Query: 637 SGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
S S+D T LW +V R C+ H +S S DG ASGS+DK
Sbjct: 308 SASYDTTVRLW--DVERG--GCLQVLSKHHEPVYTISFSPDGRYLASGSFDK 355
>SB_53611| Best HMM Match : Homeobox (HMM E-Value=1.2e-25)
Length = 389
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -2
Query: 765 VTVSRHRQTFXSLVVTTVSDHTVNRISRYIPYPEYCCLIM 646
V V+R R T+ S+ T+S T+ +SR+I Y C ++
Sbjct: 184 VRVTRKRITYQSIGFHTISTWTIRGVSRWISYLTRCFTVL 223
>SB_29857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +3
Query: 456 HDDWVSAVQAH---SSWILSGSYDNSLHIWSTKGQ--HKLAIPGHTSPVKAVSW 602
H WV ++ S + SGS+DNS+ +W +G +I H + V + W
Sbjct: 192 HKGWVWSLACDPMGESRLCSGSWDNSVKVWDLRGSIVEMTSIREHRAAVLCMEW 245
>SB_23517| Best HMM Match : WD40 (HMM E-Value=0)
Length = 860
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 616 GDQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVS-ADGNRFASGSWD 789
GD + S S D+T +L W+V V + YRGH C+ + D SGS+D
Sbjct: 623 GDSSRIASCSADRTVVL--WDVSTGQV--IRRYRGHTSRVNCVKFNQPDSTVIISGSYD 677
>SB_57199| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 374
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = -3
Query: 383 IPLFLVSALRGRHKVTLHILRNQILP 306
+PL L++AL R TLH+LRN+I+P
Sbjct: 207 LPLLLITALYAR---TLHLLRNRIIP 229
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +3
Query: 456 HDDWVSAVQA--HSSWILSGSYDNSLHIWSTKG-QHKLAIPGHTSPVKAVSWVS 608
H +WVS V S I+S SYD ++ IW + ++ GH V+ ++ S
Sbjct: 789 HKNWVSGVLVTPDSKRIISSSYDKTVKIWDVETCAFVNSLDGHDGHVRGIAITS 842
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/65 (33%), Positives = 27/65 (41%)
Frame = +1
Query: 601 GFPSXGDQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASG 780
G D VS S D+T L +WN+ + T RGH C+ S D SG
Sbjct: 837 GIAITSDGRRLVSASQDRT--LRIWNL--ETFAHVSTLRGHSETVYCVCCSPDDKFAISG 892
Query: 781 SWDKM 795
S D M
Sbjct: 893 SEDTM 897
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
D +S S+D+T + +W+V + + GHD +++++DG R S S D+
Sbjct: 801 DSKRIISSSYDKT--VKIWDV--ETCAFVNSLDGHDGHVRGIAITSDGRRLVSASQDR 854
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
VSG+ D T +W + + + T +GH + V+ D R S S+DK
Sbjct: 764 VSGAFDHTVKIW----DMDTLSLVHTLKGHKNWVSGVLVTPDSKRIISSSYDK 812
>SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1845
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 697 DCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
+C+ Y GH CL +S D R +GS D+
Sbjct: 1358 NCVKVYDGHHNAVNCLEISEDRTRLFTGSNDQ 1389
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +3
Query: 495 WILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQXRSSYIC*WIS*SNSNTL 668
++++ + D S+ +W G K+ GH +KAV+ ++ SYI +S S+ NT+
Sbjct: 198 YLITAARDGSIKVWDDTGNVKIIFIGH---LKAVNTLAIYPFGSYI---MSGSSDNTI 249
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 474 AVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWV 605
A+ S+I+SGS DN++ +WS ++ PVK + V
Sbjct: 232 AIYPFGSYIMSGSSDNTIRVWSLDMSDEVNRIHTNQPVKGLGSV 275
>SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1892
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 810 HSKDKHFIPAPTCKTVTVSRHRQTFXSLVVTTVSDHTV 697
H+ H + PT TV+ H T ++ TV+DHTV
Sbjct: 1348 HAVTDHTVRGPTVTDHTVTGHTVTGHTVTDHTVTDHTV 1385
>SB_35846| Best HMM Match : Baculo_p24 (HMM E-Value=1.6)
Length = 810
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 762 TVSRHRQTFXSLVVTTVSDHTVNRISRY-IPYPEYCCLIMRSTNKCSL 622
T+S H+ T SLV T +D T+ +S + C + T C+L
Sbjct: 147 TISPHKTTLRSLVCTLTADTTLGTLSSHKTTLRSLVCTLTAGTTLCTL 194
>SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32)
Length = 458
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 631 FVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
F +GS D A++ +W++ + + C+ T+ D LS S DG ASGS D
Sbjct: 248 FATGSAD--ALVSLWDL--DELVCVRTFSRLDWPVRTLSFSHDGRMLASGSED 296
>SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18)
Length = 736
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 486 HSSWILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAVSW 602
H +++ SYD S +W + +A GH V +V W
Sbjct: 34 HPDRLVTSSYDGSAQVWDVETNQPIANYRGHVGRVMSVCW 73
>SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22)
Length = 195
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +3
Query: 486 HSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 602
H SW+LS + + W + + H PV+ +S+
Sbjct: 83 HDSWLLSADHSGIVKYWQSNMNNVQMYEAHKEPVRGLSF 121
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
D SGS D T + VW+ + + GH C+ VS DG AS S DK
Sbjct: 1192 DDRKIFSGSEDCT--IRVWDSKTGALLAQLD--GHAGAVTCVRVSPDGGVIASSSADK 1245
>SB_8765| Best HMM Match : WD40 (HMM E-Value=3.9e-15)
Length = 481
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 498 ILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 602
ILSG D +W + G+ + H P+ +VSW
Sbjct: 66 ILSGGEDCKYKVWDSYGRVLYSSAPHEYPITSVSW 100
>SB_56777| Best HMM Match : SmpA_OmlA (HMM E-Value=1.8)
Length = 227
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 398 LEVEYLERFPXTNSTGLFNARRLGVS 475
LE EY + FP NS LF RRL +S
Sbjct: 168 LEEEYFQSFPEENSKRLFVKRRLQLS 193
>SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 456 HDDWVSAVQA--HSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAV 596
HD+ VS+V S I+S S+D S+ +W T Q + GH+ V V
Sbjct: 86 HDNVVSSVSVDCEKSRIISASWDRSIKVWDLTSEQCIRTLKGHSDFVLGV 135
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
D V GS + +W + ++ + + + HD +SV + +R S SWD+
Sbjct: 52 DSKRIVVGSDNGAVDIWSQSGSLLGLENLASLKEHDNVVSSVSVDCEKSRIISASWDR 109
>SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 616 GDQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
GD + ++ S D++ L VW V R + + H C S DG SGS DK
Sbjct: 38 GDGQSLLTASDDKS--LKVWTVHRQKF--LYSLNAHMNWVRCAKFSPDGRLIVSGSDDK 92
>SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30)
Length = 1292
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 628 TFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
+FVSG+ D +A LW C+ T+ GH+ ++ G F +GS D
Sbjct: 127 SFVSGACDASAKLW----DIRGGTCVQTFTGHESDINAVAFFPSGFAFGTGSDD 176
>SB_10756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 713
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 460 SCIKQSCGVGXREPFQVFDLKRVLCRYPF 374
S +++SC F+VF ++LCRY F
Sbjct: 264 SAMRKSCVATRLSRFRVFGCAKILCRYSF 292
>SB_9416| Best HMM Match : WD40 (HMM E-Value=0)
Length = 700
Score = 28.3 bits (60), Expect = 8.6
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +1
Query: 517 TIAYIYGAQKDNTN*PYQV-IHHQ*KQYHGFPSXGDQATFVSGSHDQTAILWVWNVPRNP 693
+I + + + PY V + H + + T +S S D T + VW+ R
Sbjct: 52 SIIRCWNVRNERIKDPYMVSLEHHTDWVNDIVLCRNGKTILSASSDTT--VKVWDATRG- 108
Query: 694 VDCMITYRGHDXGXECLSVSADGNRFASGSWDK-MFVFGV 810
CM T R H + L+ ++ ASG DK +F++ V
Sbjct: 109 -FCMSTLRTHKDYVQALAYASCKEHVASGGLDKQIFLWDV 147
>SB_6763| Best HMM Match : WD40 (HMM E-Value=4.6e-24)
Length = 208
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 498 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVS 599
I SGS D++L +W K + L +PGH ++ V+
Sbjct: 116 ICSGSADSTLKVWDMKTKKLLYDLPGHADELEGVN 150
>SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITY-RGHDXGXECLSVSADGNRFASGSWD 789
D SG D + VW + C+ + R H G C++ S D ++ SGS+D
Sbjct: 275 DSEMLASGGQDGK--IKVWKLQTG--QCLRRFERAHSKGVTCVTFSRDASQLLSGSFD 328
>SB_18573| Best HMM Match : WD40 (HMM E-Value=1.5e-06)
Length = 76
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 492 SWILSGSYDNSLHIW-STKGQHKLAIPGHT 578
S+++S S+D S+ +W +T G L + GH+
Sbjct: 4 SYVISTSWDESIRLWDTTSGTCSLTLRGHS 33
>SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35)
Length = 844
Score = 28.3 bits (60), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 712 YRGHDXGXECLSVSADGNRFASGSWD 789
++GH G C+ +S DG + +G D
Sbjct: 465 FQGHTDGASCIDISPDGTKLWTGGLD 490
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,919,189
Number of Sequences: 59808
Number of extensions: 448838
Number of successful extensions: 1235
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2479240863
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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