Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_A02
(868 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 42 8e-04
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 41 0.001
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 39 0.004
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 37 0.016
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 37 0.021
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 36 0.050
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 36 0.050
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 36 0.050
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 35 0.087
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 35 0.087
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 35 0.087
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 34 0.11
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 33 0.20
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 33 0.26
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 33 0.26
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 33 0.26
Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical pr... 32 0.61
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 31 0.81
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 31 0.81
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 31 1.4
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 30 2.5
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 30 2.5
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 30 2.5
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 30 2.5
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 29 3.3
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 29 4.3
U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription f... 29 4.3
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 29 4.3
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 29 4.3
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 29 4.3
AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinate... 29 4.3
AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of s... 29 4.3
AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of s... 29 4.3
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 5.7
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 29 5.7
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 29 5.7
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 28 7.5
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 28 7.5
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 28 9.9
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 28 9.9
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 41.5 bits (93), Expect = 8e-04
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 164 LQVXFITKQAQYA-VPDSPYAIQCNVXPADLNTLINAILKXPSPSFEKAVIFDFLVCGXL 340
+Q+ F +K + +PD+ + + D+N L+N ++ ++++ F+FLV
Sbjct: 21 VQITFFSKDEEIPQIPDAVFDVPTGAECDDMNLLLNKTIEANDGAWKERR-FEFLVGETF 79
Query: 341 LCASLAEHLQEKGVSTEDTLEVE 409
L SLAE ++E V TE L+VE
Sbjct: 80 LRTSLAEFIEEYEVETETILKVE 102
Score = 36.3 bits (80), Expect = 0.028
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
D FV G +Q +L ++ + + + + RGH+ EC+SV++D R SGS D
Sbjct: 178 DGTEFVVGGENQ--LLTLYAIEKGALVEKLILRGHERAVECVSVNSDSTRAISGSVD 232
Score = 33.1 bits (72), Expect = 0.26
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 432 PTPQDCLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSWV 605
P P + DWVS+VQ + I S +Y + I KG+ KLA+ +K +S V
Sbjct: 110 PKPLHDIQAPDWVSSVQIANGHIFSTTYGGDIVIVDRKGKETKLAVNSANRLLKCISIV 168
Score = 24.6 bits (51), Expect(2) = 3.9
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +3
Query: 558 LAIPGHTSPVKAVSWVSFQXRSSYIC*W 641
+ I GH V AV W + ++ C W
Sbjct: 273 VTIGGHRDKVSAVEWCPWNSGHAFSCSW 300
Score = 23.0 bits (47), Expect(2) = 3.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 474 AVQAHSSWILSGSYDNSLHIWS 539
+V + S+ +SGS D +L IW+
Sbjct: 218 SVNSDSTRAISGSVDTNLKIWN 239
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 456 HDDWVSAVQAH--SSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAV 596
H WV AV + W SG D + IW GQ KL++ GH S V+AV
Sbjct: 183 HTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAV 232
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 456 HDDWVSAVQAH--SSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAV 596
H WV AV + W SG D + IW GQ KL++ GH S V+AV
Sbjct: 183 HTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAV 232
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 489 SSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSW 602
SS ++SGS+D S+ IW K G +P H+ PV AVS+
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSF 221
Score = 33.1 bits (72), Expect = 0.26
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 456 HDDWVSAVQAH--SSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQXRSS 626
H D VSAV + S I SGSYD + IW T GQ + +P V++V F
Sbjct: 212 HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENP--PVAFVKFSPNGK 269
Query: 627 YI 632
YI
Sbjct: 270 YI 271
Score = 32.7 bits (71), Expect = 0.35
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 495 WILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKA 593
WI+SGS D ++IW+ + + + + GHT PV A
Sbjct: 315 WIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLA 348
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
VSGS D++ + +W+V C+ T H +S + DG+ ASGS+D
Sbjct: 187 VSGSFDES--VRIWDVKTGM--CIKTLPAHSDPVSAVSFNRDGSLIASGSYD 234
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 37.1 bits (82), Expect = 0.016
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
D TF+SG+ D +A LW ++ R+ + C T+ GH+ ++ GNRFA+GS D
Sbjct: 195 DFRTFISGACDASAKLW--DI-RDGM-CKQTFPGHESDINAVAFFPSGNRFATGSDD 247
Score = 31.9 bits (69), Expect = 0.61
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 718 GHDXGXECLSVSADGNRFASGSWD 789
GHD CL V+ DG +GSWD
Sbjct: 310 GHDNRVSCLGVTEDGMAVCTGSWD 333
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILW----VWNVPRNPVDCMI-TYRGHDXGXECLSVSADGNRFASGS 783
D+ T +S S D+T ++W V V P+ + + GH+ + +S+DG SGS
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGS 88
Query: 784 WDK 792
WDK
Sbjct: 89 WDK 91
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 474 AVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPG--HTSPVKAV 596
A A + I+SGS D S+ +W+T Q K I HT V V
Sbjct: 118 AFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTV 160
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 465 WVSAVQAHSSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVS 599
W S + +I+SGS D ++ +WST G + GHTS V+ ++
Sbjct: 298 WTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMA 343
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 456 HDDWV-SAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPV 587
H+D V + +Q H +++GS DN+L +W KG+ + GHT V
Sbjct: 252 HEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGV 297
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
V+GS D T L VW + + V M T GH G +S G SGS D+
Sbjct: 268 VTGSDDNT--LKVWCIDKGEV--MYTLVGHTGGVWTSQISQCGRYIVSGSTDR 316
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQXRSSYI 632
H V VQ + ++SG YD ++ IW+ G+ + GH + V + + F+ S +
Sbjct: 375 HHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYS---LLFESERSIV 431
Query: 633 C 635
C
Sbjct: 432 C 432
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 465 WVSAVQAHSSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVS 599
W S + +I+SGS D ++ +WST G + GHTS V+ ++
Sbjct: 300 WTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMA 345
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 456 HDDWV-SAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPV 587
H+D V + +Q H +++GS DN+L +W KG+ + GHT V
Sbjct: 254 HEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGV 299
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
V+GS D T L VW + + V M T GH G +S G SGS D+
Sbjct: 270 VTGSDDNT--LKVWCIDKGEV--MYTLVGHTGGVWTSQISQCGRYIVSGSTDR 318
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQXRSSYI 632
H V VQ + ++SG YD ++ IW+ G+ + GH + V + + F+ S +
Sbjct: 377 HHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYS---LLFESERSIV 433
Query: 633 C 635
C
Sbjct: 434 C 434
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 465 WVSAVQAHSSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVS 599
W S + +I+SGS D ++ +WST G + GHTS V+ ++
Sbjct: 300 WTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMA 345
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 456 HDDWV-SAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPV 587
H+D V + +Q H +++GS DN+L +W KG+ + GHT V
Sbjct: 254 HEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGV 299
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
V+GS D T L VW + + V M T GH G +S G SGS D+
Sbjct: 270 VTGSDDNT--LKVWCIDKGEV--MYTLVGHTGGVWTSQISQCGRYIVSGSTDR 318
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQXRSSYI 632
H V VQ + ++SG YD ++ IW+ G+ + GH + V + + F+ S +
Sbjct: 377 HHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYS---LLFESERSIV 433
Query: 633 C 635
C
Sbjct: 434 C 434
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 34.7 bits (76), Expect = 0.087
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 498 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAV 596
I SGS+D ++ IW + G +IPGH PV +V
Sbjct: 205 IASGSFDETIRIWCARNGNTIFSIPGHEDPVSSV 238
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 495 WILSGSYDNSLHIWSTKGQHKL-AIPGHTSPV 587
WI+SGS D+ ++IW+ + + L + GH + V
Sbjct: 334 WIVSGSEDHKVYIWNLQTREILQTLDGHNTAV 365
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 456 HDDWVSAV--QAHSSWILSGSYDNSLHIW-STKGQHKLAIPGHTSPVKAVSWVSFQXRSS 626
H+D VS+V +++ SGSYD + IW ST G + P ++ V F
Sbjct: 231 HEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHP--PITHVKFSPNGK 288
Query: 627 YI 632
YI
Sbjct: 289 YI 290
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 637 SGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
SGS D+T +W RN + + + GH+ + + DG ASGS+D
Sbjct: 207 SGSFDETIRIWC---ARNG-NTIFSIPGHEDPVSSVCFNRDGAYLASGSYD 253
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 34.7 bits (76), Expect = 0.087
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
D TF+SG+ D +A LW ++ R+ + C T+ GH+ ++ GN FA+GS D
Sbjct: 195 DFRTFISGACDASAKLW--DI-RDGM-CKQTFPGHESDINAVAFFPSGNAFATGSDD 247
Score = 31.9 bits (69), Expect = 0.61
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 718 GHDXGXECLSVSADGNRFASGSWD 789
GHD CL V+ DG +GSWD
Sbjct: 310 GHDNRVSCLGVTEDGMAVCTGSWD 333
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 34.7 bits (76), Expect = 0.087
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
D TF+SG+ D +A LW ++ R+ + C T+ GH+ ++ GN FA+GS D
Sbjct: 195 DFRTFISGACDASAKLW--DI-RDGM-CKQTFPGHESDINAVAFFPSGNAFATGSDD 247
Score = 31.9 bits (69), Expect = 0.61
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 718 GHDXGXECLSVSADGNRFASGSWD 789
GHD CL V+ DG +GSWD
Sbjct: 310 GHDNRVSCLGVTEDGMAVCTGSWD 333
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
D FVSGS D+T L VW + C T GH+ G C+ G R SGS D
Sbjct: 246 DPEMFVSGSLDKT--LKVWKLGEQESIC--TLEGHEKGVNCVEF-LTGGRIVSGSDD 297
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWSTK 545
H + V+ V +WI+SG+ D+++ IW+++
Sbjct: 318 HKNNVTFVTPFKTWIISGAEDSTVKIWNSQ 347
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 610 SXGDQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWD 789
S Q +SG+ +++ +++ + + T++GH CL S D + F S S+D
Sbjct: 875 SANHQYILISGNQSDPGVIYAYHIASEQL--IGTFKGHTAAVTCLCSSNDSSLFVSTSFD 932
Query: 790 K 792
K
Sbjct: 933 K 933
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
+S S D T + W++ C+ T+RGH+ + +S DG FAS S D+
Sbjct: 207 LSASRDHT--IKQWDISTGY--CVYTFRGHNDWVRMIRISNDGTLFASASLDQ 255
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 634 VSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFASGSWDK 792
+S S D T + W++ C+ T+RGH+ + +S DG FAS S D+
Sbjct: 207 LSASRDHT--IKQWDISTGY--CVYTFRGHNDWVRMIRISNDGTLFASASLDQ 255
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 495 WILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSW 602
+I S S+D S+ +W + G++ ++ GH PV V+W
Sbjct: 374 YIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAW 410
>Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical
protein R134.2 protein.
Length = 1118
Score = 31.9 bits (69), Expect = 0.61
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 454 CTTIGCQLFRHTVVGFY-QEVMTIAYIYGAQKDNTN 558
C+T+ C T++G Y +++ + Y+YG NTN
Sbjct: 352 CSTVECMTANTTIMGGYARQLFDVVYLYGVALTNTN 387
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 31.5 bits (68), Expect = 0.81
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFAS 777
++ +FVS S D+T LW + + C TY+ H +++ AD N AS
Sbjct: 1119 NENSFVSASSDKTVKLWSIKPELDEIGCQWTYQKHTRPVHDITILAD-NSIAS 1170
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 31.5 bits (68), Expect = 0.81
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 619 DQATFVSGSHDQTAILWVWNVPRNPVDCMITYRGHDXGXECLSVSADGNRFAS 777
++ +FVS S D+T LW + + C TY+ H +++ AD N AS
Sbjct: 1119 NENSFVSASSDKTVKLWSIKPELDEIGCQWTYQKHTRPVHDITILAD-NSIAS 1170
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 462 DWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAV 596
+W + + +I +G DN + IW + K+A GH P+ A+
Sbjct: 328 NWDAIFSSEGRYIFTGGNDNQVKIWDVENNKKVAQWDGHIKPLTAM 373
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 30.7 bits (66), Expect = 1.4
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIWS 539
H+ +S++ H + I+SGS+D ++ +W+
Sbjct: 487 HESAISSIDIHGNHIVSGSWDRTIKMWT 514
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIW-STKGQH--KLAIPGHTSPVKAVSWVSFQXR 620
H V+ + + SG ++ IW +T+ H K IP + PVK ++W S R
Sbjct: 60 HQTTVAKISPTGFYCASGDTQGNIRIWDTTQSTHILKHTIPVFSGPVKDIAWDSESKR 117
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIW-STKGQH--KLAIPGHTSPVKAVSWVSFQXR 620
H V+ + SG ++ IW +T+ H K IP + PVK +SW S R
Sbjct: 60 HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 117
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIW-STKGQH--KLAIPGHTSPVKAVSWVSFQXR 620
H V+ + SG ++ IW +T+ H K IP + PVK +SW S R
Sbjct: 60 HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 117
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 456 HDDWVSAVQAHSSWILSGSYDNSLHIW-STKGQH--KLAIPGHTSPVKAVSWVSFQXR 620
H V+ + SG ++ IW +T+ H K IP + PVK +SW S R
Sbjct: 60 HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 117
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +3
Query: 450 LMHDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAI-PGH 575
L H D++ H WI+S S D ++ IW+ + ++ +AI GH
Sbjct: 92 LGHLDYIRTTFFHHKYPWIISASDDQTVRIWNWQSRNSIAILTGH 136
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 456 HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAIPGHTSP 584
H+ +V Q H + + S S D ++ +W G K +PG +P
Sbjct: 136 HNHYVMCAQFHPTEDLVASASLDQTVRVWDISGLRKKQMPGGGAP 180
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 718 GHDXGXECLSVSADGNRFASGSWD 789
GH+ CL S DG S SWD
Sbjct: 326 GHENRISCLRTSPDGTAVCSASWD 349
>U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription
factor UNC-37 protein.
Length = 612
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 709 TYRGHDXGXECLSVSADGNRFASGSWD 789
T GH G CL +S DG + SG D
Sbjct: 453 TLPGHQDGASCLDLSKDGTKLWSGGLD 479
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +3
Query: 408 NTWK-GSLXPTPQDCLMHDD-WVSAVQAHSSWILSGSYDNSLHIWSTKGQH-KLAIPGHT 578
N WK G+ T +C + V +Q I+SG DN++ IW K + GHT
Sbjct: 203 NNWKRGNYKMTRINCQSENSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHT 262
Query: 579 SPVKAVSW 602
V + +
Sbjct: 263 GSVLCLQY 270
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +3
Query: 468 VSAVQAHSSWIL--SGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSW 602
V +++ H ++ +G+ D + IW K Q A PGHT+ V+++++
Sbjct: 341 VHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAF 388
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 718 GHDXGXECLSVSADGNRFASGSWD 789
GH+ CL S DG S SWD
Sbjct: 326 GHENRISCLRTSPDGTAVCSASWD 349
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +3
Query: 408 NTWK-GSLXPTPQDCLMHDD-WVSAVQAHSSWILSGSYDNSLHIWSTKGQH-KLAIPGHT 578
N WK G+ T +C + V +Q I+SG DN++ IW K + GHT
Sbjct: 203 NNWKRGNYKMTRINCQSENSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHT 262
Query: 579 SPVKAVSW 602
V + +
Sbjct: 263 GSVLCLQY 270
>AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinated
protein 37 protein.
Length = 612
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 709 TYRGHDXGXECLSVSADGNRFASGSWD 789
T GH G CL +S DG + SG D
Sbjct: 453 TLPGHQDGASCLDLSKDGTKLWSGGLD 479
>AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 709 TYRGHDXGXECLSVSADGNRFASGSWD 789
T GH G CL +S DG + SG D
Sbjct: 453 TLPGHQDGASCLDLSKDGTKLWSGGLD 479
>AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 709 TYRGHDXGXECLSVSADGNRFASGSWD 789
T GH G CL +S DG + SG D
Sbjct: 453 TLPGHQDGASCLDLSKDGTKLWSGGLD 479
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +3
Query: 456 HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAV 596
H V+ V+A ++ +++S S+D +L +WST G L + GH + + V
Sbjct: 421 HTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILCV 470
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 498 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAV 596
+++GS DNS+ +W + ++ +P HTS V V
Sbjct: 395 MITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRV 428
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 715 RGHDXGXECLSVSADGNRFASGSWDKMFVFGVQA 816
+GHD C+ +S DG S ++D+ F Q+
Sbjct: 461 QGHDTRILCVDISPDGQWMCSSAFDRTFKLWAQS 494
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 450 LMHDDWVSAVQAH--SSWILSGSYDNSLHIWSTKGQ 551
L D V V H +W+L+ Y+ ++HIW+ + Q
Sbjct: 12 LARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQ 47
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 616 GDQATFVSGSHDQTAILWVWNVPRNPVD 699
G+ + FV+ S D AI W+VPR P D
Sbjct: 741 GNPSRFVNHSCDPNAICEKWSVPRTPGD 768
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 616 GDQATFVSGSHDQTAILWVWNVPRNPVD 699
G+ + FV+ S D AI W+VPR P D
Sbjct: 755 GNPSRFVNHSCDPNAICEKWSVPRTPGD 782
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 706 ITYRGHDXGXECLSVSADGNRFASGSWDKMFV 801
I + GH C+ S+DG FA+G D + V
Sbjct: 97 IMFSGHKKAVNCIEFSSDGLLFATGGKDGVIV 128
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +3
Query: 444 DCLMHDDWVS--AVQAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSP-VKAVSWVSF 611
+ + H + VS A+ + ++LSGS+D S+ +W+ + + L I H AV+ V+F
Sbjct: 595 EAIAHVEGVSSLAIDPNGLYLLSGSHDGSIRMWNMEKRSCLQEISAHRKKNDSAVTSVAF 654
Query: 612 QXRSSYI 632
S I
Sbjct: 655 HPSRSLI 661
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +3
Query: 444 DCLMHDDWVS--AVQAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSP-VKAVSWVSF 611
+ + H + VS A+ + ++LSGS+D S+ +W+ + + L I H AV+ V+F
Sbjct: 595 EAIAHVEGVSSLAIDPNGLYLLSGSHDGSIRMWNMEKRSCLQEISAHRKKNDSAVTSVAF 654
Query: 612 QXRSSYI 632
S I
Sbjct: 655 HPSRSLI 661
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Frame = +3
Query: 498 ILSGSYDNSLHIWSTKGQHK---LAIP---GHTSPVKAVSW 602
++S SY LH W + + K A+P GH V+ V W
Sbjct: 361 VISSSYFGGLHCWKSTDEQKTFWTALPMTGGHVGEVRDVDW 401
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 471 SAVQAHSSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSW 602
S V S +S S+D ++ +WSTK + K + H V V+W
Sbjct: 495 SGVVDFSHLFISSSHDWTVKLWSTKDANLKFSFESHPDLVLDVAW 539
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,306,482
Number of Sequences: 27780
Number of extensions: 331154
Number of successful extensions: 873
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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