Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_P24
         (951 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    26   0.49 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   6.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   8.0  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   8.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   8.0  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.8 bits (54), Expect = 0.49
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
 Frame = +2

Query: 308 GLFGLKNGAEIPFDALYNADACTLTSCPTEAGKTQTLDFSLHIGKKLPTGNFEF---KWK 478
           G+ G+KN +   FD ++ +  CT   C  EA KT  L + + I ++      +F     K
Sbjct: 136 GIVGVKNASLFIFDLIFLSFRCT-KLC-KEANKTAFLWYHIKIDREDEEARDDFIKLGIK 193

Query: 479 LWNEDNESQMCCYRTLKNS 535
           L N+  E   C    + NS
Sbjct: 194 LSNDKLEITACRLFKIDNS 212


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 216 LTVDCATSKKGKTRRFLSTLHHNSPQLSSR 305
           LT +CAT  +      + TLHH+  +L +R
Sbjct: 562 LTKNCATKAQSVVLGRICTLHHHLSKLVTR 591


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 231 HSRLLTQGSIRTSFTVHALASTSRHS 154
           +SRL+  GS R  F V  +    RH+
Sbjct: 723 YSRLVGDGSARRRFVVAVVGFLRRHN 748


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 501 LSLSSFQSFHLNSKFPVGSFFPI 433
           L+L + QS    SKF    FFP+
Sbjct: 341 LALLAQQSTSRTSKFSAAGFFPV 363


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
 Frame = +2

Query: 11  LPTHYREFLRF---ESQPNCVS-VYNMALYSW 94
           L  HY EF+R+   E  P  V  +   AL SW
Sbjct: 400 LENHYEEFVRYELGELAPGLVGPLLTSALASW 431


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 222 VDCATSKKGKTRRFLSTLHHN 284
           + CA +  GKT  F+  + HN
Sbjct: 199 MSCAQTGSGKTAAFMLPIIHN 219


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 143 VTTRLCREVDASACTVNEVRIDPCVNSRLCHLKK 244
           +T +   E  A   T+N  R+ P + S LC +K+
Sbjct: 50  ITDQSLDEAQARKHTLNCHRMKPALFSVLCEIKE 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,740
Number of Sequences: 336
Number of extensions: 3204
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26789147
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)