Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_P21
         (952 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    24   1.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   4.6  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   6.1  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   6.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   8.0  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 826 PXXPPXPSPPP 858
           P  PP PSPPP
Sbjct: 95  PTTPPTPSPPP 105


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 809 APSXXXPPXPPXPPPP 856
           +PS   PP  P P PP
Sbjct: 109 SPSGNVPPLTPSPGPP 124


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 428 NFTNKAFFXXH 396
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 428 NFTNKAFFXXH 396
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = +2

Query: 791  TPVPPXAPSXXXPPXPPXPPPPXL 862
            T  P   P+   PP PP    P L
Sbjct: 1364 TNYPEWQPTEWHPPIPPTSEKPPL 1387


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,944
Number of Sequences: 336
Number of extensions: 2569
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26789147
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)