Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P20
(955 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.015
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.10
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.10
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.14
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.14
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.24
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.24
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 0.97
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 5.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 9.0
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.015
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPPXXPGXPPPPP 947
PP P G P PPP P PPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.9 bits (74), Expect = 0.034
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXPPPPP 947
P P P G P PPP P PPPPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 33.5 bits (73), Expect = 0.045
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXX-PGXPPPPP 947
PPP PP +P P PP G PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 32.7 bits (71), Expect = 0.078
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 853 PPXXPXXXXAPPPXXPPXXXPPXXPXXXPPPP 948
PP P PPP PP P PPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXPPPP 944
PPP P P PPP P PPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.55
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 853 PPXXPXXXXAPPPXXPPXXXPPXXPXXXPPPP 948
PP P P P P PP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP 763
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 595 PXFGGEXXXPPXGGXXPXXPPPXPP 521
P GG PP G PPP PP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.2 bits (55), Expect = 6.8
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 269 PPPPXXFXXXGXPPPP 222
PPPP G PPPP
Sbjct: 764 PPPPPGVAGAGPPPPP 779
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 850 PPPXXPXXXXAPPPXXPPXXXPPXXPXXXPPPP 948
PPP AP P P P PPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPPXXPGXPPPPP 947
PP PP P S PP PP P PPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAP--PPPLP 1736
Score = 31.1 bits (67), Expect = 0.24
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 850 PPPXXPXXXXAPPPXXPPXXXPPXXPXXXPPPP 948
P P P PPP PP P P PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPM---PAGPPSAPPPP 1734
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXP--PPPP 947
P P PP P S PP PP G P PPPP
Sbjct: 1705 PTPPPP-----PMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +1
Query: 850 PPPXXPXXXXAPP-PXXPPXXXPPXXPXXXPP 942
PP P APP P PP PP P P
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXPPPPP 947
P PP P +A PP P PPPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 853 PPXXPXXXXAPPPXXPPXXXPPXXPXXXPPPP 948
PP P APP P PP P PPPP
Sbjct: 1690 PPVRPQSA-APPQMSAPTPPPP--PMSVPPPP 1718
Score = 26.2 bits (55), Expect = 6.8
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXPPPP 944
P P P PPP PP P PP P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPP-PPSAPPMP 1724
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +1
Query: 865 PXXXXAPPPXXPPXXXPPXXPXXXPPPP 948
P + PP P PP PPPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPP 1710
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXPPP 941
PPP P P S PP P P P
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.10
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPPXXPGXPPPP 944
PP P G P P PAA PP P PP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPPXXP--GXPPPPP 947
PP P G P PPP+ P P G PP PP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 29.9 bits (64), Expect = 0.55
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPPXXP--GXPPPP 944
PP P G P PPP+ P P G PP P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPPXXPGXPPP 941
PP P G P +PPP P P P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXPPPPP 947
PPP P P P P+ P P PP P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVP 1095
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPP---XXPGXPPPPP 947
PP P P P P++ PP G PP PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPPXXPGXPPPP 944
PP PP P P P+ PP P PP
Sbjct: 1189 PPVPPPSEA-PPVPKPSVGVPPVPPPSTAPP 1218
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPP-XXPGXPPPPP 947
PP P P P P+A PP P PP P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVP 1044
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPPXX-PGXPPPPP 947
PP P P P P+ PP P PP P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/32 (37%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +3
Query: 855 PXPPXXXGRPXSPPPAAXXPPXX-PGXPPPPP 947
P P G P P P+ PP P PP P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 856 PXXPXXXXAPPPXXPPXXXPPXXPXXXPPP 945
P P APP P PP P PP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +3
Query: 852 PPXPPXXXGRPXSP--PPAAXXPPXXPGXPPPPP 947
P PP G P +P PPAA PP P P P
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPPXXPGXPPPPP 947
PP PP P P PP P P PPP
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 30.7 bits (66), Expect = 0.32
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXPPPPPXR 953
PPP PP S P PP PPPPP R
Sbjct: 337 PPPPPPPRSNAAGSIP----LPPQGRSAPPPPPPR 367
Score = 30.7 bits (66), Expect = 0.32
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXPPPPP 947
PP P P PP A PP G P PP
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 29.5 bits (63), Expect = 0.73
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPPXXPGXPPPPPXR 953
PP PP R PP PPPPP R
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPR 344
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPPXXPGXPPPP 944
PP P P P A PP P PP P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 853 PPXXPXXXXAPPPXXPPXXXPPXXPXXXPPPP 948
PP P APP PP P PPP
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 26.2 bits (55), Expect = 6.8
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Frame = +1
Query: 850 PPPXXPXXXX-APPPXXPPXXXPPXXPXXXPPPP 948
PP P APPP PP P PP P
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 26.2 bits (55), Expect = 6.8
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +3
Query: 849 PPPXPP-XXXGRPXSPPPAAXXPPXXP-GXPPPPP 947
P P PP P S PP+A PP P G P PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSA--PPSLPMGAPAAPP 448
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXP 914
PPP PP G SPP + P
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRP 274
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXPPPPP 947
PPP PP PP P PPP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 850 PPPXXPXXXXAPPPXXPPXXXPPXXPXXXPPPP 948
P P P + PP PP PP P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSA-PPSLPMGAPAAP 447
Score = 25.8 bits (54), Expect = 9.0
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = +3
Query: 849 PPPXPPXXX-GRPXSPPPAAXXPPXXPGXPPPP 944
PP PP P P A PP P PP P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 856 PXXPXXXXAPPPXXPPXXXPPXXPXXXPPPP 948
P P A PP P PP P P P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 955 GRXGGGGGXPGXXGGXXAAGGGEXGRPXXXGG 860
G G GGG G GG GGG G GG
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 955 GRXGGGGGXPGXXGGXXAAGGGEXGRPXXXGG 860
G G GGG G GG GGG G GG
Sbjct: 236 GPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 26.2 bits (55), Expect(2) = 0.14
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 471 GXXLGXPPPGPTKXXXAGGXGG 536
G G PPPGP GG GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGG 215
Score = 24.2 bits (50), Expect(2) = 0.14
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 522 GGXGGGXXGXXPPXGGXXXSPPXXGXP 602
GG GGG G GG P G P
Sbjct: 245 GGFGGGLGGFGGGPGGFGGGPGGHGGP 271
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.24
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 882 PXSPPPAAXXPPXXPGXPPPP 944
P PPP PP P PPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.24
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 883 PPPXXPPXXXPPXXPXXXPPP 945
PPP PP PP P PPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPG 929
PPP PP P S PP PP PG
Sbjct: 9 PPPPPPPPGFEPPSQPP----PPPPPG 31
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 882 PXSPPPAAXXPPXXPGXPPPPP 947
P +PPP P P PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 883 PPPXXPPXXXPPXXPXXXPPPP 948
PPP PP P PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 269 PPPPXXFXXXGXPPPPXXGG 210
PPPP F PPPP G
Sbjct: 12 PPPPPGFEPPSQPPPPPPPG 31
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.24
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPPXXPGXPPPPPXR 953
PP P P S PP PP P PP P +
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSK 163
Score = 29.9 bits (64), Expect = 0.55
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 850 PPPXXPXXXXAPPPXXP--PXXXPPXXPXXXPPPP 948
PPP P PP P P PP P PPPP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPK-VPPPP 205
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 852 PPXPPXXXGRPXSPPPAAXXPPXXPGXPPPP 944
PP P P S PP P P PPP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Frame = +1
Query: 850 PPPXXPXXXXAPPPXXPP-XXXPPXXPXXXPPPP 948
P P P PP PP PP P PP P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXPPPPP 947
PP P RP PPP+ P P PP P
Sbjct: 139 PPTSAPP---RPSIPPPSPASAPPIPSKAPPIP 168
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXPP--PPP 947
PPP P + SPP A P P PP PPP
Sbjct: 172 PPPAQPAAPVK--SPPSAPSLPSAVPPMPPKVPPP 204
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXPPPPP 947
PP P P S P P P PPPP
Sbjct: 173 PPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.1 bits (62), Expect = 0.97
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -1
Query: 955 GRXGG-GGGXPGXXGGXXAAGGGEXGRPXXXGG 860
GR G GGG G GG GG GR GG
Sbjct: 31 GRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -1
Query: 955 GRXG-GGGGXPGXXGGXXAAGGGEXGRPXXXGG 860
GR G GGG GG A GG GR GG
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 25.8 bits (54), Expect = 9.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 947 GGGGXXXGXXGGXXXGGXXGGGAXXXXGXXGGG 849
G GG G GG G GGA G GG
Sbjct: 31 GRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +3
Query: 852 PPXPPXXXGRPXSP-PPAAXXPPXXPGXPPPP 944
PP P P P PP A P P P PP
Sbjct: 577 PPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPP 608
Score = 25.8 bits (54), Expect = 9.0
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = +3
Query: 855 PXPPXXXGRPXSP-PPAAXXPPXXPGXPPPP 944
P P P P PPAA P P P PP
Sbjct: 653 PAVPVVPEAPSVPQPPAAPVVPEVPSVPQPP 683
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +3
Query: 861 PPXXXGRPXSPPPAAXXPPXXPGXPPPPP 947
PP P + PA P PPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 26.2 bits (55), Expect = 6.8
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXPPPP 944
PP P P + P+ PP P PPPP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPP--PPPP 197
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 849 PPPXPPXXXGRPXSPPPAAXXPPXXPGXPPPPP 947
PP P P PP A PG P P P
Sbjct: 1895 PPSAAPTSALPPAGPPAGATAISGNPGMPAPVP 1927
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.155 0.549
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,665,288
Number of Sequences: 5004
Number of extensions: 22890
Number of successful extensions: 304
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 487313384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
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