Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P18
(957 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 183 1e-45
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 183 1e-45
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 183 1e-45
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 183 1e-45
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 183 1e-45
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 183 1e-45
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 183 1e-45
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 183 1e-45
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 182 2e-45
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 169 2e-41
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 125 3e-28
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 75 4e-13
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 38 0.054
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 38 0.054
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 38 0.054
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 38 0.054
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 38 0.054
AK128128-1|BAC87286.1| 222|Homo sapiens protein ( Homo sapiens ... 34 0.67
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 183 bits (445), Expect = 1e-45
Identities = 87/99 (87%), Positives = 94/99 (94%)
Frame = +2
Query: 122 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 301
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 302 PXRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIXDFL 418
P RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKI DFL
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFL 106
Score = 68.9 bits (161), Expect = 3e-11
Identities = 36/68 (52%), Positives = 41/68 (60%)
Frame = +1
Query: 439 QVFKLXWRXPSIMPEF*SRQRHIXXXXXXXNIPSFIVRLDSGQHIDFSLKSPFXGGXPGR 618
QVFKL RQRHI NIPSFIVRLDS +HIDFSL+SP+ GG PGR
Sbjct: 113 QVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGR 172
Query: 619 VXRXTSXR 642
V R + +
Sbjct: 173 VKRKNAKK 180
Score = 34.7 bits (76), Expect = 0.50
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 423 RRLQTPGVQAGLAXSIHHARILI 491
RRLQT + GLA SIHHAR+LI
Sbjct: 108 RRLQTQVFKLGLAKSIHHARVLI 130
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 183 bits (445), Expect = 1e-45
Identities = 87/99 (87%), Positives = 94/99 (94%)
Frame = +2
Query: 122 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 301
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 302 PXRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIXDFL 418
P RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKI DFL
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFL 106
Score = 68.9 bits (161), Expect = 3e-11
Identities = 36/68 (52%), Positives = 41/68 (60%)
Frame = +1
Query: 439 QVFKLXWRXPSIMPEF*SRQRHIXXXXXXXNIPSFIVRLDSGQHIDFSLKSPFXGGXPGR 618
QVFKL RQRHI NIPSFIVRLDS +HIDFSL+SP+ GG PGR
Sbjct: 113 QVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGR 172
Query: 619 VXRXTSXR 642
V R + +
Sbjct: 173 VKRKNAKK 180
Score = 34.7 bits (76), Expect = 0.50
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 423 RRLQTPGVQAGLAXSIHHARILI 491
RRLQT + GLA SIHHAR+LI
Sbjct: 108 RRLQTQVFKLGLAKSIHHARVLI 130
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 183 bits (445), Expect = 1e-45
Identities = 87/99 (87%), Positives = 94/99 (94%)
Frame = +2
Query: 122 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 301
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 302 PXRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIXDFL 418
P RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKI DFL
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFL 106
Score = 68.9 bits (161), Expect = 3e-11
Identities = 36/68 (52%), Positives = 41/68 (60%)
Frame = +1
Query: 439 QVFKLXWRXPSIMPEF*SRQRHIXXXXXXXNIPSFIVRLDSGQHIDFSLKSPFXGGXPGR 618
QVFKL RQRHI NIPSFIVRLDS +HIDFSL+SP+ GG PGR
Sbjct: 113 QVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGR 172
Query: 619 VXRXTSXR 642
V R + +
Sbjct: 173 VKRKNAKK 180
Score = 34.7 bits (76), Expect = 0.50
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 423 RRLQTPGVQAGLAXSIHHARILI 491
RRLQT + GLA SIHHAR+LI
Sbjct: 108 RRLQTQVFKLGLAKSIHHARVLI 130
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 183 bits (445), Expect = 1e-45
Identities = 87/99 (87%), Positives = 94/99 (94%)
Frame = +2
Query: 122 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 301
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 302 PXRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIXDFL 418
P RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKI DFL
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFL 106
Score = 68.9 bits (161), Expect = 3e-11
Identities = 36/68 (52%), Positives = 41/68 (60%)
Frame = +1
Query: 439 QVFKLXWRXPSIMPEF*SRQRHIXXXXXXXNIPSFIVRLDSGQHIDFSLKSPFXGGXPGR 618
QVFKL RQRHI NIPSFIVRLDS +HIDFSL+SP+ GG PGR
Sbjct: 113 QVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGR 172
Query: 619 VXRXTSXR 642
V R + +
Sbjct: 173 VKRKNAKK 180
Score = 34.7 bits (76), Expect = 0.50
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 423 RRLQTPGVQAGLAXSIHHARILI 491
RRLQT + GLA SIHHAR+LI
Sbjct: 108 RRLQTQVFKLGLAKSIHHARVLI 130
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 183 bits (445), Expect = 1e-45
Identities = 87/99 (87%), Positives = 94/99 (94%)
Frame = +2
Query: 122 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 301
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 302 PXRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIXDFL 418
P RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKI DFL
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFL 106
Score = 68.9 bits (161), Expect = 3e-11
Identities = 36/68 (52%), Positives = 41/68 (60%)
Frame = +1
Query: 439 QVFKLXWRXPSIMPEF*SRQRHIXXXXXXXNIPSFIVRLDSGQHIDFSLKSPFXGGXPGR 618
QVFKL RQRHI NIPSFIVRLDS +HIDFSL+SP+ GG PGR
Sbjct: 113 QVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGR 172
Query: 619 VXRXTSXR 642
V R + +
Sbjct: 173 VKRKNAKK 180
Score = 34.7 bits (76), Expect = 0.50
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 423 RRLQTPGVQAGLAXSIHHARILI 491
RRLQT + GLA SIHHAR+LI
Sbjct: 108 RRLQTQVFKLGLAKSIHHARVLI 130
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 183 bits (445), Expect = 1e-45
Identities = 87/99 (87%), Positives = 94/99 (94%)
Frame = +2
Query: 122 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 301
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 302 PXRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIXDFL 418
P RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKI DFL
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFL 106
Score = 68.9 bits (161), Expect = 3e-11
Identities = 36/68 (52%), Positives = 41/68 (60%)
Frame = +1
Query: 439 QVFKLXWRXPSIMPEF*SRQRHIXXXXXXXNIPSFIVRLDSGQHIDFSLKSPFXGGXPGR 618
QVFKL RQRHI NIPSFIVRLDS +HIDFSL+SP+ GG PGR
Sbjct: 113 QVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGR 172
Query: 619 VXRXTSXR 642
V R + +
Sbjct: 173 VKRKNAKK 180
Score = 34.7 bits (76), Expect = 0.50
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 423 RRLQTPGVQAGLAXSIHHARILI 491
RRLQT + GLA SIHHAR+LI
Sbjct: 108 RRLQTQVFKLGLAKSIHHARVLI 130
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 183 bits (445), Expect = 1e-45
Identities = 87/99 (87%), Positives = 94/99 (94%)
Frame = +2
Query: 122 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 301
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 302 PXRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIXDFL 418
P RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKI DFL
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFL 106
Score = 68.9 bits (161), Expect = 3e-11
Identities = 36/68 (52%), Positives = 41/68 (60%)
Frame = +1
Query: 439 QVFKLXWRXPSIMPEF*SRQRHIXXXXXXXNIPSFIVRLDSGQHIDFSLKSPFXGGXPGR 618
QVFKL RQRHI NIPSFIVRLDS +HIDFSL+SP+ GG PGR
Sbjct: 113 QVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGR 172
Query: 619 VXRXTSXR 642
V R + +
Sbjct: 173 VKRKNAKK 180
Score = 34.7 bits (76), Expect = 0.50
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 423 RRLQTPGVQAGLAXSIHHARILI 491
RRLQT + GLA SIHHAR+LI
Sbjct: 108 RRLQTQVFKLGLAKSIHHARVLI 130
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 183 bits (445), Expect = 1e-45
Identities = 87/99 (87%), Positives = 94/99 (94%)
Frame = +2
Query: 122 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 301
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 302 PXRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIXDFL 418
P RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKI DFL
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFL 106
Score = 68.9 bits (161), Expect = 3e-11
Identities = 36/68 (52%), Positives = 41/68 (60%)
Frame = +1
Query: 439 QVFKLXWRXPSIMPEF*SRQRHIXXXXXXXNIPSFIVRLDSGQHIDFSLKSPFXGGXPGR 618
QVFKL RQRHI NIPSFIVRLDS +HIDFSL+SP+ GG PGR
Sbjct: 113 QVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGR 172
Query: 619 VXRXTSXR 642
V R + +
Sbjct: 173 VKRKNAKK 180
Score = 34.7 bits (76), Expect = 0.50
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 423 RRLQTPGVQAGLAXSIHHARILI 491
RRLQT + GLA SIHHAR+LI
Sbjct: 108 RRLQTQVFKLGLAKSIHHARVLI 130
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 182 bits (443), Expect = 2e-45
Identities = 86/99 (86%), Positives = 94/99 (94%)
Frame = +2
Query: 122 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 301
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 302 PXRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIXDFL 418
P RLFEGNALLRRLVR+GVLDE +MKLDY+LGLKI DFL
Sbjct: 68 PRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFL 106
Score = 63.3 bits (147), Expect = 1e-09
Identities = 35/68 (51%), Positives = 39/68 (57%)
Frame = +1
Query: 439 QVFKLXWRXPSIMPEF*SRQRHIXXXXXXXNIPSFIVRLDSGQHIDFSLKSPFXGGXPGR 618
QVFKL RQRHI NIPSFIVRLDS +HIDFSL+SP G PGR
Sbjct: 113 QVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRPGR 172
Query: 619 VXRXTSXR 642
V R + +
Sbjct: 173 VKRKNAKK 180
Score = 34.7 bits (76), Expect = 0.50
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 423 RRLQTPGVQAGLAXSIHHARILI 491
RRLQT + GLA SIHHAR+LI
Sbjct: 108 RRLQTQVFKLGLAKSIHHARVLI 130
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 169 bits (410), Expect = 2e-41
Identities = 82/99 (82%), Positives = 90/99 (90%)
Frame = +2
Query: 122 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 301
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67
Query: 302 PXRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIXDFL 418
P RLFEGNALL RLV IGVLDE +MKLDY+LGLKI DFL
Sbjct: 68 PRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFL 106
Score = 65.3 bits (152), Expect = 3e-10
Identities = 35/68 (51%), Positives = 39/68 (57%)
Frame = +1
Query: 439 QVFKLXWRXPSIMPEF*SRQRHIXXXXXXXNIPSFIVRLDSGQHIDFSLKSPFXGGXPGR 618
QVFKL RQRH NIPSFIVRLDS +HIDFSL SP+ GG PGR
Sbjct: 113 QVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGR 172
Query: 619 VXRXTSXR 642
V R + +
Sbjct: 173 VKRKNAKK 180
Score = 34.7 bits (76), Expect = 0.50
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 423 RRLQTPGVQAGLAXSIHHARILI 491
RRLQT + GLA SIHHAR+LI
Sbjct: 108 RRLQTQVFKLGLAKSIHHARVLI 130
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 125 bits (301), Expect = 3e-28
Identities = 57/63 (90%), Positives = 62/63 (98%)
Frame = +2
Query: 131 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPXR 310
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP R
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61
Query: 311 LFE 319
LFE
Sbjct: 62 LFE 64
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 74.9 bits (176), Expect = 4e-13
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = +2
Query: 296 KDPXRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIXDFL 418
+DP RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKI DFL
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFL 45
Score = 58.4 bits (135), Expect = 4e-08
Identities = 31/56 (55%), Positives = 34/56 (60%)
Frame = +1
Query: 439 QVFKLXWRXPSIMPEF*SRQRHIXXXXXXXNIPSFIVRLDSGQHIDFSLKSPFXGG 606
QVFKL RQRHI NIPSFIVRLDS +HIDFSL+SP+ GG
Sbjct: 52 QVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107
Score = 34.7 bits (76), Expect = 0.50
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 423 RRLQTPGVQAGLAXSIHHARILI 491
RRLQT + GLA SIHHAR+LI
Sbjct: 47 RRLQTQVFKLGLAKSIHHARVLI 69
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 37.9 bits (84), Expect = 0.054
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +2
Query: 182 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPXRLFEGNALLRRLVRIGVL 361
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 362 DEKQMKLDYVLGLKIXDFLXASS 430
+ L++ DF+ ASS
Sbjct: 90 PTRG-------SLELCDFVTASS 105
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 37.9 bits (84), Expect = 0.054
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +2
Query: 182 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPXRLFEGNALLRRLVRIGVL 361
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 362 DEKQMKLDYVLGLKIXDFLXASS 430
+ L++ DF+ ASS
Sbjct: 90 PTRG-------SLELCDFVTASS 105
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 37.9 bits (84), Expect = 0.054
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +2
Query: 182 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPXRLFEGNALLRRLVRIGVL 361
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 362 DEKQMKLDYVLGLKIXDFLXASS 430
+ L++ DF+ ASS
Sbjct: 90 PTRG-------SLELCDFVTASS 105
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 37.9 bits (84), Expect = 0.054
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +2
Query: 182 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPXRLFEGNALLRRLVRIGVL 361
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 362 DEKQMKLDYVLGLKIXDFLXASS 430
+ L++ DF+ ASS
Sbjct: 90 PTRG-------SLELCDFVTASS 105
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 37.9 bits (84), Expect = 0.054
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +2
Query: 182 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPXRLFEGNALLRRLVRIGVL 361
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 362 DEKQMKLDYVLGLKIXDFLXASS 430
+ L++ DF+ ASS
Sbjct: 90 PTRG-------SLELCDFVTASS 105
>AK128128-1|BAC87286.1| 222|Homo sapiens protein ( Homo sapiens
cDNA FLJ46249 fis, clone TESTI4021377. ).
Length = 222
Score = 34.3 bits (75), Expect = 0.67
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 504 YSCPXASCEHPIIYCAPGLWPAH*LLSEISIXWRSSWTCQ 623
+SCP A P+ + PG WP +S W +W CQ
Sbjct: 139 WSCPYAGLTVPLPWLWPGPWPYSDPAMTLSWPWPGTWPCQ 178
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,960,803
Number of Sequences: 237096
Number of extensions: 1795156
Number of successful extensions: 3484
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3464
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12658656216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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