Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_P17
         (953 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U57314-1|AAB49926.1|  624|Drosophila melanogaster LAMA protein.        48   2e-05
BT001475-1|AAN71230.1|  658|Drosophila melanogaster LD13253p pro...    48   2e-05
AE014296-945|AAN12118.2|  658|Drosophila melanogaster CG10645-PC...    48   2e-05
AE014296-944|AAF50787.3|  658|Drosophila melanogaster CG10645-PB...    48   2e-05
AE014296-943|AAG22333.2|  658|Drosophila melanogaster CG10645-PA...    48   2e-05
AY069584-1|AAL39729.1|  195|Drosophila melanogaster LD32469p pro...    33   0.58 
AF232775-1|AAF43415.1|  195|Drosophila melanogaster SR family sp...    33   0.58 
AE014134-2203|AAF53192.1|  195|Drosophila melanogaster CG5442-PB...    33   0.58 

>U57314-1|AAB49926.1|  624|Drosophila melanogaster LAMA protein.
          Length = 624

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 22/55 (40%), Positives = 30/55 (54%)
 Frame = +1

Query: 295 VAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVL 459
           V +  Y + +   GWA +E+ T R   D  QAY+AG LEG LT   I+  W N +
Sbjct: 40  VGRICYKDSVYENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTWRNIYNQWSNTI 94


>BT001475-1|AAN71230.1|  658|Drosophila melanogaster LD13253p
           protein.
          Length = 658

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 22/55 (40%), Positives = 30/55 (54%)
 Frame = +1

Query: 295 VAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVL 459
           V +  Y + +   GWA +E+ T R   D  QAY+AG LEG LT   I+  W N +
Sbjct: 74  VGRICYKDSVYENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTWRNIYNQWSNTI 128


>AE014296-945|AAN12118.2|  658|Drosophila melanogaster CG10645-PC,
           isoform C protein.
          Length = 658

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 22/55 (40%), Positives = 30/55 (54%)
 Frame = +1

Query: 295 VAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVL 459
           V +  Y + +   GWA +E+ T R   D  QAY+AG LEG LT   I+  W N +
Sbjct: 74  VGRICYKDSVYENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTWRNIYNQWSNTI 128


>AE014296-944|AAF50787.3|  658|Drosophila melanogaster CG10645-PB,
           isoform B protein.
          Length = 658

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 22/55 (40%), Positives = 30/55 (54%)
 Frame = +1

Query: 295 VAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVL 459
           V +  Y + +   GWA +E+ T R   D  QAY+AG LEG LT   I+  W N +
Sbjct: 74  VGRICYKDSVYENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTWRNIYNQWSNTI 128


>AE014296-943|AAG22333.2|  658|Drosophila melanogaster CG10645-PA,
           isoform A protein.
          Length = 658

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 22/55 (40%), Positives = 30/55 (54%)
 Frame = +1

Query: 295 VAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVL 459
           V +  Y + +   GWA +E+ T R   D  QAY+AG LEG LT   I+  W N +
Sbjct: 74  VGRICYKDSVYENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTWRNIYNQWSNTI 128


>AY069584-1|AAL39729.1|  195|Drosophila melanogaster LD32469p
           protein.
          Length = 195

 Score = 33.1 bits (72), Expect = 0.58
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +1

Query: 277 DIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 414
           ++ D+Y+ +  YT E  + G+AF+  +  RD+ D  +A     L+G
Sbjct: 48  EVGDIYIPRDRYTRE--SRGFAFVRFYDKRDAEDALEAMDGRMLDG 91


>AF232775-1|AAF43415.1|  195|Drosophila melanogaster SR family
           splicing factor SC35 protein.
          Length = 195

 Score = 33.1 bits (72), Expect = 0.58
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +1

Query: 277 DIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 414
           ++ D+Y+ +  YT E  + G+AF+  +  RD+ D  +A     L+G
Sbjct: 48  EVGDIYIPRDRYTRE--SRGFAFVRFYDKRDAEDALEAMDGRMLDG 91


>AE014134-2203|AAF53192.1|  195|Drosophila melanogaster CG5442-PB,
           isoform B protein.
          Length = 195

 Score = 33.1 bits (72), Expect = 0.58
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +1

Query: 277 DIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 414
           ++ D+Y+ +  YT E  + G+AF+  +  RD+ D  +A     L+G
Sbjct: 48  EVGDIYIPRDRYTRE--SRGFAFVRFYDKRDAEDALEAMDGRMLDG 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,749,080
Number of Sequences: 53049
Number of extensions: 529691
Number of successful extensions: 816
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4751175096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)