Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_P17
         (953 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83104-4|CAB05478.2|  582|Caenorhabditis elegans Hypothetical pr...    59   5e-09
AC025723-2|AAK29943.1|  581|Caenorhabditis elegans Hypothetical ...    55   7e-08
AL032626-2|CAA21539.1|  571|Caenorhabditis elegans Hypothetical ...    51   1e-06

>Z83104-4|CAB05478.2|  582|Caenorhabditis elegans Hypothetical
           protein F09B12.3 protein.
          Length = 582

 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 25/58 (43%), Positives = 37/58 (63%)
 Frame = +1

Query: 295 VAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVLKGY 468
           VA A + N +N TGW FLE+ T  +   + QAYSAG+LEG L++ ++  H +N  + Y
Sbjct: 81  VAVARWQNAVNTTGWTFLEVETKENYCPQLQAYSAGYLEGLLSKTVLTYHLKNAQEDY 138


>AC025723-2|AAK29943.1|  581|Caenorhabditis elegans Hypothetical
           protein Y54F10AM.8 protein.
          Length = 581

 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 24/56 (42%), Positives = 35/56 (62%)
 Frame = +1

Query: 295 VAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVLK 462
           VA   Y+N++N TGW  LE+ T    + + QAY AG  EG LTR  I+ H++N ++
Sbjct: 72  VALGKYSNQVNTTGWGILEIETFASHSYDVQAYGAGVAEGELTRLQIYYHYRNTIE 127


>AL032626-2|CAA21539.1|  571|Caenorhabditis elegans Hypothetical
           protein Y37D8A.2 protein.
          Length = 571

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = +1

Query: 295 VAKATYTNEINNTGWAFLELHT-SRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVLKGY 468
           +A A + +E+N TGWAFLE+   S       Q Y+AGF EG  TR LI +H  N + GY
Sbjct: 52  LATAYFHDEVNQTGWAFLEVDVISPKIPHYLQGYAAGFAEGRATRHLIDLHIINTVNGY 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,111,820
Number of Sequences: 27780
Number of extensions: 294104
Number of successful extensions: 601
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)