Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P16
(953 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46130| Best HMM Match : No HMM Matches (HMM E-Value=.) 222 3e-58
SB_11655| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 5e-51
SB_46129| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 3e-36
SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 5e-35
SB_53305| Best HMM Match : S-AdoMet_synt_N (HMM E-Value=0.0056) 80 3e-15
SB_16847| Best HMM Match : S-AdoMet_synt_M (HMM E-Value=0) 38 0.012
SB_15158| Best HMM Match : Cadherin (HMM E-Value=7.5e-23) 31 1.8
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_18815| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_28626| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
>SB_46130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 222 bits (543), Expect = 3e-58
Identities = 114/192 (59%), Positives = 135/192 (70%), Gaps = 1/192 (0%)
Frame = +3
Query: 183 SVFLFTSESVGEGHPDKMCDQISXAILDXHLNQDPDAKVACETITKTGMVLLCGEITSKA 362
+ FLFTSESVGEGHPDKMCDQIS AILD HL QDP+AKVACET+ KTGM+LLCGEITS A
Sbjct: 29 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSNA 88
Query: 363 NVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQ-VQILLRVCILTXXK*I*GLEI 539
VDYQ VVR+ +K IGYDDS KGFD++T N+LVA+E+Q V I V + + + G
Sbjct: 89 VVDYQSVVRQCIKDIGYDDSEKGFDYKTCNVLVALEQQSVDIAHGVHVGREEEDV-GAGD 147
Query: 540 RA*CSVMQPDETEECMPLTXXLAHKLNXKIAELTRNGEFWXXRPHSKTQVTCQYVFAGGA 719
+ DETEE MPLT LAHK+N K+AE R+G RP SKTQVT +Y F G
Sbjct: 148 QGLMFGYATDETEELMPLTVVLAHKMNQKLAEYRRDGTLPWARPDSKTQVTVEYKFEHGR 207
Query: 720 XSPXXVHTVXLS 755
P VHT+ +S
Sbjct: 208 AIPLRVHTIVIS 219
>SB_11655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 198 bits (483), Expect = 5e-51
Identities = 107/202 (52%), Positives = 125/202 (61%)
Frame = +3
Query: 165 YDMEDGSVFLFTSESVGEGHPDKMCDQISXAILDXHLNQDPDAKVACETITKTGMVLLCG 344
Y D FLFTSESV EGH DKMCDQIS A+LD HL QDP AKVACET TKTG+VLL G
Sbjct: 44 YSTSDCDNFLFTSESVNEGHSDKMCDQISDAVLDAHLEQDPYAKVACETATKTGLVLLFG 103
Query: 345 EITSKANVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQVQILLRVCILTXXK*I 524
EITS A VDYQ VVR T++ IGY+DSS GFD++T ++L+AI+EQV + + L
Sbjct: 104 EITSNARVDYQAVVRNTIRDIGYNDSSTGFDYKTCSVLLAIQEQVAEIAQTVHLNRRDDE 163
Query: 525 *GLEIRA*CSVMQPDETEECMPLTXXLAHKLNXKIAELTRNGEFWXXRPHSKTQVTCQYV 704
G + DETEE MPLT LAHKL ++AE + P KTQVT Y
Sbjct: 164 IGAGDQGLMFGYATDETEELMPLTTVLAHKLCARLAECRKGKILPWLLPDGKTQVTVDYR 223
Query: 705 FAGGAXSPXXVHTVXLSXPXLP 770
GA P VHTV +S P
Sbjct: 224 LERGACIPERVHTVLISTQHTP 245
>SB_46129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 149 bits (361), Expect = 3e-36
Identities = 66/82 (80%), Positives = 75/82 (91%)
Frame = +3
Query: 183 SVFLFTSESVGEGHPDKMCDQISXAILDXHLNQDPDAKVACETITKTGMVLLCGEITSKA 362
+ FLFTSESVGEGHPDKMCDQIS AILD HL QDP+AKVACE++ KTGM+++CGEITS A
Sbjct: 9 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACESVAKTGMIVVCGEITSLA 68
Query: 363 NVDYQKVVRETVKHIGYDDSSK 428
NVDYQKVVR+T+K IGYDDSSK
Sbjct: 69 NVDYQKVVRDTIKQIGYDDSSK 90
>SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 460
Score = 145 bits (351), Expect = 5e-35
Identities = 74/149 (49%), Positives = 96/149 (64%)
Frame = +3
Query: 309 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQVQIL 488
++ KTGM+++CGEITS ANVDYQKVVR+T+K IGYDDSSKGFD++T +L AIE+Q +
Sbjct: 2 SVAKTGMIVVCGEITSLANVDYQKVVRDTIKQIGYDDSSKGFDYKTCTVLQAIEQQSPDI 61
Query: 489 LRVCILTXXK*I*GLEIRA*CSVMQPDETEECMPLTXXLAHKLNXKIAELTRNGEFWXXR 668
+ + G + DET+E MPLT LAH LN ++A+ RNG R
Sbjct: 62 AQGVHIGRSDEDLGAGDQGLMFGYATDETDELMPLTVVLAHGLNKRLADCRRNGSLPWVR 121
Query: 669 PHSKTQVTCQYVFAGGAXSPXXVHTVXLS 755
P SKTQVT +Y F GG P VHT+ +S
Sbjct: 122 PDSKTQVTVEYKFQGGKAVPLRVHTIVIS 150
>SB_53305| Best HMM Match : S-AdoMet_synt_N (HMM E-Value=0.0056)
Length = 70
Score = 79.8 bits (188), Expect = 3e-15
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +3
Query: 183 SVFLFTSESVGEGHPDKMCDQISXAILDXHLNQDPDAKVAC 305
+ FLFTSESVGEGHPDKMCDQIS AILD HL QDP+AKVAC
Sbjct: 29 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVAC 69
>SB_16847| Best HMM Match : S-AdoMet_synt_M (HMM E-Value=0)
Length = 192
Score = 37.9 bits (84), Expect = 0.012
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 567 DETEECMPLTXXLAHKLNXKIAELTRNGEFWXXRPHSKTQVTCQY 701
+ET+ MP AH+L + +EL RNG RP +K+QVT +
Sbjct: 24 NETDSLMPAPVYYAHRLVERQSELRRNGTLPWLRPDAKSQVTINW 68
Score = 33.5 bits (73), Expect = 0.26
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 521 DIGAGDQGLMFGYAT 565
D GAGDQGLMFGYAT
Sbjct: 9 DQGAGDQGLMFGYAT 23
>SB_15158| Best HMM Match : Cadherin (HMM E-Value=7.5e-23)
Length = 390
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +3
Query: 342 GEITSKANVDYQKVVRETV---KHIGYDDSSKGFDWR 443
GEITS N+D +K+ + K I YD G+D+R
Sbjct: 103 GEITSNVNIDREKLPGSNLLEFKAIAYDAKGAGYDYR 139
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 408 GYDDSSKGFDWRTLNLLVAIEEQVQILLRVCILT 509
GY D+ W++ +L+A +E Q L C+L+
Sbjct: 85 GYTDNDIKLSWKSTKILIANKEMAQFSLGDCVLS 118
>SB_18815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 67 RRTVWGYISGLTLNSECRRLQK*MDTXK-PTDTVMIWKMDQYFCSH 201
R VW ++GL+ N E K + T + PT+ V++W + + F +H
Sbjct: 416 RGQVWQMMAGLSENDELVDSYKHLFTKESPTEQVIVWDIHRTFPAH 461
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 67 RRTVWGYISGLTLNSECRRLQK*MDTXK-PTDTVMIWKMDQYFCSH 201
R VW ++GL+ N E K + T + PT+ V++W + + F +H
Sbjct: 70 RGQVWQMMAGLSENDELVDSYKHLFTKESPTEQVIVWDIHRTFPAH 115
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 408 GYDDSSKGFDWRTLNLLVAIEEQVQILLRVCILT 509
GY D+ W++ +L+A +E Q L C+L+
Sbjct: 212 GYTDNDIKLSWKSTKILIANKEMAQFSLGDCVLS 245
>SB_28626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 28.3 bits (60), Expect = 9.7
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 390 ETVKHIGYDDSSKGFDWRTLNLLV 461
E+VK YDD ++ FDW + +++
Sbjct: 552 ESVKEFQYDDGAEDFDWSSSTIVI 575
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,539,735
Number of Sequences: 59808
Number of extensions: 478112
Number of successful extensions: 851
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2800542235
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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