Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P16
(953 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 225 4e-59
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 225 4e-59
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 224 8e-59
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 206 1e-53
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 144 1e-34
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 140 1e-33
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 139 2e-33
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 93 3e-19
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 89 3e-18
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 75 8e-14
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.53
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.53
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 32 0.53
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 29 4.9
U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical p... 29 6.5
U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical p... 29 6.5
AF000263-4|AAG00016.1| 159|Caenorhabditis elegans Hypothetical ... 29 6.5
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 225 bits (550), Expect = 4e-59
Identities = 114/194 (58%), Positives = 133/194 (68%)
Frame = +3
Query: 189 FLFTSESVGEGHPDKMCDQISXAILDXHLNQDPDAKVACETITKTGMVLLCGEITSKANV 368
FLFTSESV EGHPDKMCDQIS A+LD HL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 369 DYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQVQILLRVCILTXXK*I*GLEIRA* 548
DYQ +VR +K IGYDDSSKGFD++T N+LVA+E+Q + + G +
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 549 CSVMQPDETEECMPLTXXLAHKLNXKIAELTRNGEFWXXRPHSKTQVTCQYVFAGGAXSP 728
DETEE MPLT L+HKLN K+ EL R+GE RP SKTQVT +Y GGA P
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVP 185
Query: 729 XXVHTVXLSXPXLP 770
VHTV +S P
Sbjct: 186 LRVHTVVISTQHSP 199
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 225 bits (550), Expect = 4e-59
Identities = 114/194 (58%), Positives = 133/194 (68%)
Frame = +3
Query: 189 FLFTSESVGEGHPDKMCDQISXAILDXHLNQDPDAKVACETITKTGMVLLCGEITSKANV 368
FLFTSESV EGHPDKMCDQIS A+LD HL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 369 DYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQVQILLRVCILTXXK*I*GLEIRA* 548
DYQ +VR +K IGYDDSSKGFD++T N+LVA+E+Q + + G +
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 549 CSVMQPDETEECMPLTXXLAHKLNXKIAELTRNGEFWXXRPHSKTQVTCQYVFAGGAXSP 728
DETEE MPLT L+HKLN K+ EL R+GE RP SKTQVT +Y GGA P
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVP 185
Query: 729 XXVHTVXLSXPXLP 770
VHTV +S P
Sbjct: 186 LRVHTVVISTQHSP 199
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 224 bits (547), Expect = 8e-59
Identities = 116/195 (59%), Positives = 136/195 (69%), Gaps = 1/195 (0%)
Frame = +3
Query: 189 FLFTSESVGEGHPDKMCDQISXAILDXHLNQDPDAKVACETITKTGMVLLCGEITSKANV 368
FLFTSESV EGHPDKMCDQIS A+LD HL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 369 DYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQV-QILLRVCILTXXK*I*GLEIRA 545
DYQ +VR +K IGYDDSSKGFD++T N+LVA+E+Q +I V + + G +
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADV-GAGDQG 124
Query: 546 *CSVMQPDETEECMPLTXXLAHKLNXKIAELTRNGEFWXXRPHSKTQVTCQYVFAGGAXS 725
DETEE MPLT L+HKLN K+ EL R+GE RP SKTQVT +Y GGA
Sbjct: 125 IMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACV 184
Query: 726 PXXVHTVXLSXPXLP 770
P VHTV +S P
Sbjct: 185 PLRVHTVVISTQHSP 199
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 206 bits (504), Expect = 1e-53
Identities = 109/197 (55%), Positives = 134/197 (68%), Gaps = 1/197 (0%)
Frame = +3
Query: 183 SVFLFTSESVGEGHPDKMCDQISXAILDXHLNQDPDAKVACETITKTGMVLLCGEITSKA 362
S FLFTSESV EGHPDKMCDQIS A+LD HL QDP+AKVACET+TKTGMV+LCGEITSKA
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKA 62
Query: 363 NVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQ-VQILLRVCILTXXK*I*GLEI 539
VDYQ +VR ++ IG+ DSS GFD +T N+LVA+E+Q +I V + + + G
Sbjct: 63 VVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDV-GAGD 121
Query: 540 RA*CSVMQPDETEECMPLTXXLAHKLNXKIAELTRNGEFWXXRPHSKTQVTCQYVFAGGA 719
+ DETEE MPLT L+HK+N ++ +L RNG RP SK+QVT +Y GA
Sbjct: 122 QGIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGA 181
Query: 720 XSPXXVHTVXLSXPXLP 770
P VHTV +S P
Sbjct: 182 TIPLRVHTVVVSTQHSP 198
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 144 bits (348), Expect = 1e-34
Identities = 65/81 (80%), Positives = 71/81 (87%)
Frame = +3
Query: 189 FLFTSESVGEGHPDKMCDQISXAILDXHLNQDPDAKVACETITKTGMVLLCGEITSKANV 368
FLFTSESV EGHPDKMCDQIS A+LD HL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 369 DYQKVVRETVKHIGYDDSSKG 431
DYQ +VR +K IGYDDSSKG
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKG 86
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 140 bits (340), Expect = 1e-33
Identities = 75/148 (50%), Positives = 92/148 (62%)
Frame = +3
Query: 327 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQVQILLRVCIL 506
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFD++T N+LVA+E+Q + +
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 507 TXXK*I*GLEIRA*CSVMQPDETEECMPLTXXLAHKLNXKIAELTRNGEFWXXRPHSKTQ 686
G + DETEE MPLT L+HKLN K+ EL R+GE RP SKTQ
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQ 120
Query: 687 VTCQYVFAGGAXSPXXVHTVXLSXPXLP 770
VT +Y GGA P VHTV +S P
Sbjct: 121 VTIEYASEGGACVPLRVHTVVISTQHSP 148
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 139 bits (337), Expect = 2e-33
Identities = 77/149 (51%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Frame = +3
Query: 327 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQV-QILLRVCI 503
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFD++T N+LVA+E+Q +I V +
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 504 LTXXK*I*GLEIRA*CSVMQPDETEECMPLTXXLAHKLNXKIAELTRNGEFWXXRPHSKT 683
+ G + DETEE MPLT L+HKLN K+ EL R+GE RP SKT
Sbjct: 61 DKDIADV-GAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKT 119
Query: 684 QVTCQYVFAGGAXSPXXVHTVXLSXPXLP 770
QVT +Y GGA P VHTV +S P
Sbjct: 120 QVTIEYSSEGGACVPLRVHTVVISTQHSP 148
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 93.1 bits (221), Expect = 3e-19
Identities = 53/121 (43%), Positives = 66/121 (54%)
Frame = +3
Query: 408 GYDDSSKGFDWRTLNLLVAIEEQVQILLRVCILTXXK*I*GLEIRA*CSVMQPDETEECM 587
GY D GFD++T N+LVA+E+Q + + G + DETEE M
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 588 PLTXXLAHKLNXKIAELTRNGEFWXXRPHSKTQVTCQYVFAGGAXSPXXVHTVXLSXPXL 767
PLT L+HKLN K+ EL R+GE RP SKTQVT +Y GGA P VHTV +S
Sbjct: 80 PLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVISTQHS 139
Query: 768 P 770
P
Sbjct: 140 P 140
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 89.4 bits (212), Expect = 3e-18
Identities = 53/126 (42%), Positives = 68/126 (53%), Gaps = 3/126 (2%)
Frame = +3
Query: 402 HIGYDDSSK---GFDWRTLNLLVAIEEQVQILLRVCILTXXK*I*GLEIRA*CSVMQPDE 572
H+ D +K GFD++T N+LVA+E+Q + + G + DE
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 573 TEECMPLTXXLAHKLNXKIAELTRNGEFWXXRPHSKTQVTCQYVFAGGAXSPXXVHTVXL 752
TEE MPLT L+HKLN K+ EL R+GE RP SKTQVT +Y GGA P VHTV +
Sbjct: 93 TEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVI 152
Query: 753 SXPXLP 770
S P
Sbjct: 153 STQHSP 158
Score = 77.4 bits (182), Expect = 1e-14
Identities = 38/53 (71%), Positives = 40/53 (75%)
Frame = +3
Query: 189 FLFTSESVGEGHPDKMCDQISXAILDXHLNQDPDAKVACETITKTGMVLLCGE 347
FLFTSESV EGHPDKMCDQIS A+LD HL QDP AKVAC KT VL+ E
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLVALE 58
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 74.9 bits (176), Expect = 8e-14
Identities = 33/39 (84%), Positives = 34/39 (87%)
Frame = +3
Query: 189 FLFTSESVGEGHPDKMCDQISXAILDXHLNQDPDAKVAC 305
FLFTSESV EGHPDKMCDQIS A+LD HL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 189 FLFTSESVGEGHPDKMCDQ 245
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.53
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 255 AILDXHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 395
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.53
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 255 AILDXHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 395
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.53
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 255 AILDXHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 395
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical protein
W03A3.2 protein.
Length = 1540
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -2
Query: 592 NGMHSSVSSGCITEHQALISSPYIYXXSVKIHTLSNIWTCSSXATNKLSVRQS 434
N ++S ++S + +H L + + H N+WT SS +T+ S+R S
Sbjct: 946 NIIYSPLTSSPVIKHPKLEINHFYLKDVCHDHNAWNLWTKSSTSTSSCSIRVS 998
>U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical
protein F08F8.1 protein.
Length = 352
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -1
Query: 440 PIKTFGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 306
P FGR D NF H FG HH GF +GF
Sbjct: 145 PTGGFGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 189
>U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical
protein F08F8.5 protein.
Length = 281
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -1
Query: 440 PIKTFGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 306
P FGR D NF H FG HH GF +GF
Sbjct: 219 PTGGFGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 263
>AF000263-4|AAG00016.1| 159|Caenorhabditis elegans Hypothetical
protein T08B2.8 protein.
Length = 159
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +3
Query: 342 GEIT--SKANVDYQKVV-RETVKHIGYDDSSKGFDWRTLNLLVAIEEQVQIL 488
G+IT SK + Y+K + ++ K I Y SKGF++ + A+EE ++++
Sbjct: 78 GDITWNSKLDHQYKKAMWKDEDKKIAYVFMSKGFEFSYPQMFEALEEDLELV 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,148,934
Number of Sequences: 27780
Number of extensions: 361442
Number of successful extensions: 722
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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