Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_P14
         (982 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.3  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 927 PXPPPPPRXE 956
           P PPPPPR E
Sbjct: 731 PPPPPPPRVE 740


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 749 PPPPPPXHQ 775
           PPPP P HQ
Sbjct: 736 PPPPHPHHQ 744


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 749 PPPPPPXHQ 775
           PPPP P HQ
Sbjct: 628 PPPPHPHHQ 636


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.310    0.144    0.473 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,080
Number of Sequences: 336
Number of extensions: 2151
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27823477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)