Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P14
(982 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 36 0.038
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 36 0.038
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 36 0.038
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 36 0.066
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.066
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.066
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 34 0.20
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 33 0.27
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.35
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 33 0.35
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 32 0.62
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.82
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_19709| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 2.3
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 27 3.0
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 29 4.4
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 29 5.8
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 5.8
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.6
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.6
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.6
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 36.3 bits (80), Expect = 0.038
Identities = 25/89 (28%), Positives = 26/89 (29%), Gaps = 1/89 (1%)
Frame = +2
Query: 719 GGXPXXXPXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXP-PXXXXXXXXXXXXXXXRP 895
GG P P PPPP N Q P P P
Sbjct: 260 GGEPPP-PKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATP 318
Query: 896 XPPXHKQXXPPXPPPPXXGGGRXPXPPXS 982
PP + P PPPP G P PP S
Sbjct: 319 PPPPPSRDQVPLPPPPLRGQIAPPPPPIS 347
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/79 (24%), Positives = 21/79 (26%)
Frame = +2
Query: 740 PXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPXHKQX 919
P PPPP + PP P PP H +
Sbjct: 143 PFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRH 202
Query: 920 XPPXPPPPXXGGGRXPXPP 976
PPPP G P PP
Sbjct: 203 G-SAPPPPERSSGPPPPPP 220
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 36.3 bits (80), Expect = 0.038
Identities = 25/89 (28%), Positives = 26/89 (29%), Gaps = 1/89 (1%)
Frame = +2
Query: 719 GGXPXXXPXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXP-PXXXXXXXXXXXXXXXRP 895
GG P P PPPP N Q P P P
Sbjct: 172 GGEPPP-PKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATP 230
Query: 896 XPPXHKQXXPPXPPPPXXGGGRXPXPPXS 982
PP + P PPPP G P PP S
Sbjct: 231 PPPPPSRDQVPLPPPPLRGQIAPPPPPIS 259
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/79 (24%), Positives = 21/79 (26%)
Frame = +2
Query: 740 PXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPXHKQX 919
P PPPP + PP P PP H +
Sbjct: 55 PFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRH 114
Query: 920 XPPXPPPPXXGGGRXPXPP 976
PPPP G P PP
Sbjct: 115 G-SAPPPPERSSGPPPPPP 132
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 36.3 bits (80), Expect = 0.038
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP G G P PP
Sbjct: 307 PPPPGGAPPPPPPPPPPPPGDGGAPPPP 334
Score = 33.1 bits (72), Expect = 0.35
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP P PPPP GG P PP
Sbjct: 292 PPPPPADGSAPAPPPPPPPGGAPPPPPP 319
Score = 33.1 bits (72), Expect = 0.35
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P P PP PPPP GG P PP
Sbjct: 308 PPPGGAPPPPPPPPPPPPGDGGAPPPPP 335
Score = 32.7 bits (71), Expect = 0.47
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +1
Query: 508 PPPXGXGGXXXXPXPPXPPTKKXGXXXGAXAXPXPP 615
PPP GG P PP PP G GA P PP
Sbjct: 305 PPPPPPGGAPPPPPPPPPPPPGDG---GAPPPPPPP 337
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 923 PPXPPPPXXGGGRXPXPP 976
PP PPPP GG P PP
Sbjct: 319 PPPPPPPGDGGAPPPPPP 336
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP P PPPP G P PP
Sbjct: 293 PPPPADGSAPAPPPPPPPGGAPPPPPPP 320
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 750 PPPPPQXTXKTXPPXHXXGXAPPP 821
PPPP + PP G APPP
Sbjct: 293 PPPPADGSAPAPPPPPPPGGAPPP 316
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 35.5 bits (78), Expect = 0.066
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +3
Query: 750 PPPPPQXTXKTXPPXHXXGXAPPPXXTXXHXRXXXXXXXXXXXXXXXXXXXXXTNXTXXP 929
PPPPP PP G APPP + P
Sbjct: 305 PPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPP 364
Query: 930 XPPPPP 947
PPPPP
Sbjct: 365 PPPPPP 370
Score = 32.3 bits (70), Expect = 0.62
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 899 PPXHKQXXPPXPPPPXXGGGRXPXPP 976
PP PP PPPP GG P PP
Sbjct: 355 PPPVGGAAPPPPPPPPVGGPPPPPPP 380
Score = 29.9 bits (64), Expect = 3.3
Identities = 22/81 (27%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Frame = +2
Query: 749 PPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPXHKQXXPP 928
PPPPPP ++ PP P PP PP
Sbjct: 326 PPPPPPSRSSQRPPPP----------SRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPP 375
Query: 929 XPPPPXXGG-----GRXPXPP 976
PPPP G G P PP
Sbjct: 376 PPPPPIEGRPPSSLGNPPPPP 396
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXP 973
P PP + P PPPP R P P
Sbjct: 315 PPPPPARMGTAPPPPPPSRSSQRPPPP 341
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 508 PPPXGXGGXXXXPXPPXPPTK-KXGXXXGAXAXPXPPXRG 624
PPP GG P PP PP + + G P PP RG
Sbjct: 366 PPPPPVGG----PPPPPPPIEGRPPSSLGNPPPPPPPGRG 401
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 35.5 bits (78), Expect = 0.066
Identities = 23/85 (27%), Positives = 23/85 (27%), Gaps = 2/85 (2%)
Frame = +2
Query: 728 PXXXPXXPPPP--PPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXP 901
P P PPPP P N N PP P P
Sbjct: 110 PPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPP 169
Query: 902 PXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PPPP P PP
Sbjct: 170 PNAPYPPPPYPPPPNPPYPPPPNPP 194
Score = 31.9 bits (69), Expect = 0.82
Identities = 20/83 (24%), Positives = 20/83 (24%)
Frame = +2
Query: 728 PXXXPXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPX 907
P P PPPP P P P PP
Sbjct: 155 PYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPP 214
Query: 908 HKQXXPPXPPPPXXGGGRXPXPP 976
PP PPPP P PP
Sbjct: 215 PNAPNPPYPPPPNAPNPPYPPPP 237
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 104 PPPPYPPPPNPPYPPPPNAPYPPPPNPP 131
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 35.5 bits (78), Expect = 0.066
Identities = 18/68 (26%), Positives = 21/68 (30%)
Frame = +2
Query: 749 PPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPXHKQXXPP 928
PPPPP + + N+ PP P PP PP
Sbjct: 346 PPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPP 405
Query: 929 XPPPPXXG 952
PPPP G
Sbjct: 406 PPPPPTNG 413
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 750 PPPPPQXTXKTXPPXHXXGXAPPPXXT 830
PPPPP PP G PPP T
Sbjct: 365 PPPPPPTNKPPPPPPPTNGPPPPPPPT 391
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 890 RPXPPXHKQXXPPXPPPPXXGGGRXPXP 973
+P PP PP PPPP G P P
Sbjct: 373 KPPPPPPPTNGPPPPPPPTNGPPPPPPP 400
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 750 PPPPPQXTXKTXPPXHXXGXAPPPXXT 830
PPPPP PP G PPP T
Sbjct: 375 PPPPPPTNGPPPPPPPTNGPPPPPPPT 401
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 750 PPPPPQXTXKTXPPXHXXGXAPPPXXT 830
PPPPP PP G PPP T
Sbjct: 385 PPPPPPTNGPPPPPPPTNGPPPPPPPT 411
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Frame = +3
Query: 720 GGG---PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
GGG P PP PP T T PP PPP
Sbjct: 341 GGGVNPPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPP 377
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP T PP PPP
Sbjct: 367 PPPPTNKPPPPPPPTNGPPPPPPPTNGPPPP 397
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP T PP PPP
Sbjct: 377 PPPPTNGPPPPPPPTNGPPPPPPPTNGPPPP 407
Score = 28.7 bits (61), Expect = 7.6
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP +K P PPPP G P PP
Sbjct: 367 PPPPTNK----PPPPPPPTNGPPPPPPP 390
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 33.9 bits (74), Expect = 0.20
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP + P PPPP GG P PP
Sbjct: 665 PPPPGGQAGGAPPPPPPPLPGGAAPPPP 692
Score = 33.9 bits (74), Expect = 0.20
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P P PP PPPP GG P PP
Sbjct: 666 PPPGGQAGGAPPPPPPPLPGGAAPPPPP 693
Score = 32.7 bits (71), Expect = 0.47
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PPPP GGG P PP
Sbjct: 677 PPPPPPLPGGAAPPPPPPIGGGAPPPPP 704
Score = 32.7 bits (71), Expect = 0.47
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP P PPPP GG P PP
Sbjct: 678 PPPPPLPGGAAPPPPPPIGGGAPPPPPP 705
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +1
Query: 508 PPPXGXGGXXXXPXPPXPPTKKXGXXXGAXAXPXPPXRGG 627
PPP GG PP PP GA P PP GG
Sbjct: 663 PPPPPPGGQAGGAPPPPPPP----LPGGAAPPPPPPIGGG 698
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 550 PPXPPTKKXGXXXGAXAXPXPPXRGG 627
PP PP G GA P PP GG
Sbjct: 661 PPPPPPPPGGQAGGAPPPPPPPLPGG 686
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
Frame = +2
Query: 923 PPXPPPPXXGG--GRXPXPP 976
PP PPPP GG G P PP
Sbjct: 660 PPPPPPPPPGGQAGGAPPPP 679
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 33.5 bits (73), Expect = 0.27
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 890 RPXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
+P P PP PPPP GG P PP
Sbjct: 187 KPSPMAGMPPPPPPPPPPGFPGGAPPPPP 215
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.1 bits (72), Expect = 0.35
Identities = 21/79 (26%), Positives = 22/79 (27%)
Frame = +2
Query: 707 TXXXGGXPXXXPXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXX 886
T G P PPPPPP + Q PP
Sbjct: 355 TDISAGINMSPPPPPPPPPP--PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPP 412
Query: 887 XRPXPPXHKQXXPPXPPPP 943
P PP PP PPPP
Sbjct: 413 PPPPPPAPPPPPPPPPPPP 431
Score = 31.9 bits (69), Expect = 0.82
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP Q PP PPPP P PP
Sbjct: 387 PSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPP 396
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 389 PPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 398 PPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 399 PPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 400 PPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPP 398
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPP 409
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 397 PPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPP 392
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPP 403
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 390 PPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 396 PPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 401 PPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 402 PPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 33.1 bits (72), Expect = 0.35
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP R P PP
Sbjct: 206 PPPPRPPPSPPPPPPPPSPSPPRPPPPP 233
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 205 PPPPPRPPPSPPPPPPPPSPSPPRPPPP 232
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 32.3 bits (70), Expect = 0.62
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP G P PP
Sbjct: 654 PPPPGGGMFPPPPPPPPGGGVPGPPKPP 681
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP GG P PP
Sbjct: 653 PPPPPGGGMFPPPPPPPPGGG--VPGPP 678
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 31.9 bits (69), Expect = 0.82
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPPXS 982
P PP PP PPPP P PP S
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTPPPPPPS 712
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Frame = +2
Query: 890 RPXPPXHKQXXPPXPP---PPXXGGGRXPXPP 976
+P PP PP PP P GGG P PP
Sbjct: 944 QPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPP 975
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -2
Query: 336 GGAPPXXXFFFXGGXPPPPXGGXPXXXXXPXXFFKKKKXXPXKTPPP 196
G APP GG PPP GG P P P PPP
Sbjct: 950 GNAPPPPPP--PGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPPPP 994
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 508 PPPXGXGGXXXXPXPPXPPTKKXGXXXGAXAXPXPPXRGG 627
PPP G P PP G A P PP GG
Sbjct: 922 PPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGG 961
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP + + PP G APPP
Sbjct: 926 PGGNAPLPPPPPGGSAPSQPPP-PGGNAPPP 955
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 5/45 (11%)
Frame = +1
Query: 508 PPPXGXGGXXXXPX-----PPXPPTKKXGXXXGAXAXPXPPXRGG 627
PPP G P PP PP G A P PP GG
Sbjct: 935 PPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGG 979
>SB_19709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 26.2 bits (55), Expect(2) = 2.3
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = +2
Query: 893 PXPPXHKQXXP--PXPPPPXXGGGRXP 967
P PP H P P PPPP G P
Sbjct: 587 PPPPAHHVNKPGVPPPPPPSKTGKSKP 613
Score = 22.6 bits (46), Expect(2) = 2.3
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 728 PXXXPXXPPPPPPXHQXN 781
P P PPPP H N
Sbjct: 578 PVATSPPPHPPPPAHHVN 595
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 27.1 bits (57), Expect(2) = 3.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 820 GGGAXPXXWXGGXVXLVXWGGGGGXXRXXXGPPP 719
GGG GG GGGGG GPPP
Sbjct: 342 GGGGGGGGGGGGGGGGGGRGGGGGFSSRGRGPPP 375
Score = 21.4 bits (43), Expect(2) = 3.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 955 SXRGGGGGXG 926
S RGGGGG G
Sbjct: 339 SGRGGGGGGG 348
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPPPFPPPP 492
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 750 PPPPPQXTXKTXPPXHXXGXAPPPXXTXXH 839
PPPPP PP PPP T H
Sbjct: 469 PPPPPPPPPPPPPPPPPPPFPPPPPPTPLH 498
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 466 PPPPPPPPPPPPPPPPPPPPPPFPPPPP 493
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 467 PPPPPPPPPPPPPPPPPPPPPFPPPPPP 494
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 923 PPXPPPPXXGGGRXPXPPXS 982
PP PPPP G P PP S
Sbjct: 712 PPPPPPPPPGCAGLPPPPPS 731
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PP P G P PP
Sbjct: 716 PPPPPGCAGLPPPPPSPQPGCAGLPPPP 743
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P P PP PPPP G P PP
Sbjct: 730 PSPQPGCAGLPPPPPPPPPGCAGLPPPP 757
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 5.8
Identities = 21/85 (24%), Positives = 21/85 (24%)
Frame = +2
Query: 728 PXXXPXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPX 907
P P PPPPPP PP P PP
Sbjct: 916 PEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPATQVPPPPLPPL 975
Query: 908 HKQXXPPXPPPPXXGGGRXPXPPXS 982
P PPPP PP S
Sbjct: 976 ------PPPPPPVQTTTAPTLPPAS 994
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 719 GGXPXXXPXXPPPPPP 766
GG P P PPPPPP
Sbjct: 193 GGPPPPPPPPPPPPPP 208
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXP 967
P PP PP PPPP G P
Sbjct: 869 PPPPPPPPPPPPPPPPPASSTGSTP 893
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPP 943
P PP Q PP PPPP
Sbjct: 426 PPPPGFPQFQPPPPPPP 442
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 28.7 bits (61), Expect = 7.6
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 7/35 (20%)
Frame = +2
Query: 893 PXPPXHKQXXPPXP-------PPPXXGGGRXPXPP 976
P PP Q PP P PPP G G P PP
Sbjct: 569 PPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPPPP 603
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.310 0.144 0.473
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,663,676
Number of Sequences: 59808
Number of extensions: 304137
Number of successful extensions: 3157
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2069
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2907797044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
- SilkBase 1999-2023 -