Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P14
(982 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 38 0.010
At3g15000.1 68416.m01897 expressed protein similar to DAG protei... 36 0.031
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 35 0.072
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 34 0.13
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 34 0.13
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 27 0.14
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family... 27 0.18
At1g61080.1 68414.m06877 proline-rich family protein 33 0.29
At1g24150.1 68414.m03047 formin homology 2 domain-containing pro... 29 0.31
At4g18570.1 68417.m02749 proline-rich family protein common fami... 31 0.51
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 32 0.67
At3g18810.1 68416.m02389 protein kinase family protein contains ... 32 0.67
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 32 0.67
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 30 0.84
At5g62640.1 68418.m07862 proline-rich family protein contains pr... 29 0.88
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 31 0.88
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 31 1.2
At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family... 25 1.2
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 31 1.5
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 25 1.8
At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family... 30 2.0
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 26 2.3
At1g26240.1 68414.m03201 proline-rich extensin-like family prote... 30 2.7
At1g15830.1 68414.m01900 expressed protein 30 2.7
At3g22070.1 68416.m02785 proline-rich family protein contains pr... 25 2.7
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 29 3.1
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 29 3.6
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 29 3.6
At5g10060.1 68418.m01165 expressed protein 29 3.6
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro... 29 3.6
At1g26250.1 68414.m03202 proline-rich extensin, putative similar... 29 3.6
At1g72790.1 68414.m08415 hydroxyproline-rich glycoprotein family... 25 4.1
At4g33660.1 68417.m04781 expressed protein 24 4.3
At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family... 28 4.7
At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associa... 29 4.7
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 29 4.7
At3g51290.1 68416.m05614 proline-rich family protein 29 4.7
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 29 4.7
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 29 4.7
At5g04970.1 68418.m00526 pectinesterase, putative contains simil... 29 6.2
At4g34150.1 68417.m04846 C2 domain-containing protein similar to... 29 6.2
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 29 6.2
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 29 6.2
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 24 6.6
At5g62760.2 68418.m07879 nuclear protein ZAP-related similar to ... 28 8.2
At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to ... 28 8.2
At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ... 28 8.2
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 28 8.2
At5g13860.1 68418.m01620 tumour susceptibility gene 101 (TSG101)... 28 8.2
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro... 28 8.2
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 24 9.1
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 37.9 bits (84), Expect = 0.010
Identities = 21/81 (25%), Positives = 23/81 (28%)
Frame = +2
Query: 740 PXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPXHKQX 919
P PPPPPP + PP P PP +
Sbjct: 439 PPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPP 498
Query: 920 XPPXPPPPXXGGGRXPXPPXS 982
PP PPPP P P S
Sbjct: 499 PPPPPPPPPPVYSPPPPPVYS 519
Score = 32.3 bits (70), Expect = 0.51
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP + PP PPPP P PP
Sbjct: 431 PPPPVYSPPPPPPPPPPVYSPPPPPPPP 458
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/72 (25%), Positives = 19/72 (26%)
Frame = +2
Query: 728 PXXXPXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPX 907
P P P PPPP + PP P PP
Sbjct: 401 PLPPPSLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPP 460
Query: 908 HKQXXPPXPPPP 943
PP PPPP
Sbjct: 461 PPVYSPPPPPPP 472
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 429 PSPPPPVYSPPPPPPPPPPVYSPPPPPP 456
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP + PP +PPP
Sbjct: 654 PPVYYSSPPPPPPVHYSSPPPPEVHYHSPPP 684
>At3g15000.1 68416.m01897 expressed protein similar to DAG protein
(required for chloroplast differentiation and palisade
development) GB:Q38732 [Antirrhinum majus]
Length = 395
Score = 36.3 bits (80), Expect = 0.031
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +3
Query: 723 GGPXXX---LXXPPPPPQXTXKTXPPXHXXGXAPPP 821
GGP + PPPPP PP H G APPP
Sbjct: 239 GGPPPQRPPMGGPPPPPHIGGSAPPPPHMGGSAPPP 274
Score = 27.1 bits (57), Expect(2) = 0.31
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXP 973
P PP H PPPP GG P P
Sbjct: 251 PPPPPH--IGGSAPPPPHMGGSAPPPP 275
Score = 24.6 bits (51), Expect(2) = 0.31
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 719 GGXPXXXPXXPPPPPPXH 772
GG P P PPPP H
Sbjct: 239 GGPPPQRPPMGGPPPPPH 256
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 35.1 bits (77), Expect = 0.072
Identities = 24/85 (28%), Positives = 25/85 (29%)
Frame = +2
Query: 722 GXPXXXPXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXP 901
G P P PPPPP + N PP P P
Sbjct: 675 GPPSTPPPPPPPPPKANISNAPKPPAPPPLPPSSTRLGAPPPPPPPPLSKTPAP---PPP 731
Query: 902 PXHKQXXPPXPPPPXXGGGRXPXPP 976
P K P PPPP G G PP
Sbjct: 732 PLSKTPVP--PPPPGLGRGTSSGPP 754
Score = 33.1 bits (72), Expect = 0.29
Identities = 20/78 (25%), Positives = 22/78 (28%)
Frame = +2
Query: 740 PXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPXHKQX 919
P PPPPPP + PP +P PP
Sbjct: 543 PSQPPPPPPLPSFSNRDPLTTLHQPINKTPPPPPPPPPPLPSRSIPPPLAQPPPPR---- 598
Query: 920 XPPXPPPPXXGGGRXPXP 973
PP PPPP P P
Sbjct: 599 -PPPPPPPPPSSRSIPSP 615
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/83 (26%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = +2
Query: 740 PXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPXHKQX 919
P PPPPP H + PP P PP +
Sbjct: 658 PPPPPPPPTSHSGSIRVGPPSTPPPPP------PPPPKANISNAPKPPAPPPLPPSSTRL 711
Query: 920 X--PPXPPPPXXGGGRXPXPPXS 982
PP PPPP P PP S
Sbjct: 712 GAPPPPPPPPLSKTPAPPPPPLS 734
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP G P PP
Sbjct: 385 PPPPPPSAAAPPPPPPPKKGPAAPPPPP 412
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP G P PP
Sbjct: 398 PPPPKKGPAAPPPPPPPGKKGAGPPPPP 425
Score = 32.3 bits (70), Expect = 0.51
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP K P PPPP G P PP
Sbjct: 397 PPPPPKKGPAAPPPPPPPGKKGAGPPPP 424
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP P PPPP G P PP
Sbjct: 384 PPPPPPPSAAAPPPPPPPKKGPAAPPPP 411
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +2
Query: 893 PXPPXH-KQXXPPXPPPPXXGGGRXPXPP 976
P PP Q PP PPPP P PP
Sbjct: 373 PAPPGPANQTSPPPPPPPSAAAPPPPPPP 401
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 889 PPXXPXTQTXXXXPPPPPXXGXRXRPP 969
PP P PPPPP G PP
Sbjct: 384 PPPPPPPSAAAPPPPPPPKKGPAAPPP 410
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 750 PPPPPQXTXKTXPPXHXXGXAPPP 821
PPPPP PP G A PP
Sbjct: 386 PPPPPSAAAPPPPPPPKKGPAAPP 409
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP + P PPPP G + PP
Sbjct: 395 PPPPPPPKKGPAAPPPPPPPGKKGAGPP 422
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP K+ P PPPP G P PP
Sbjct: 410 PPPPPGKKGAGPPPPPPMSKKG-PPKPP 436
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 34.3 bits (75), Expect = 0.13
Identities = 23/85 (27%), Positives = 23/85 (27%)
Frame = +2
Query: 728 PXXXPXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPX 907
P P PPPPPP PP P PP
Sbjct: 39 PQSPPPPPPPPPPPPPPPPPPPPPPPAVNMSVETGIPPPPPPVTDMIKPLSSPPPPQPPP 98
Query: 908 HKQXXPPXPPPPXXGGGRXPXPPXS 982
Q PP PP R P PP S
Sbjct: 99 RSQ--PPPKPPQKNLPRRHPPPPRS 121
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 899 PPXHKQXXPPXPPPPXXGGGRXPXPP 976
PP Q PP PPPP P PP
Sbjct: 35 PPLFPQSPPPPPPPPPPPPPPPPPPP 60
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 26.6 bits (56), Expect(2) = 0.14
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPPXS 982
P PP H+ PP PP P P S
Sbjct: 34 PPPPHHQAPLPPLEAPPQKKKRNQPRTPNS 63
Score = 26.2 bits (55), Expect(2) = 0.14
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 728 PXXXPXXPPPPPPXHQ 775
P PPPPPP HQ
Sbjct: 25 PNSSAAAPPPPPPHHQ 40
>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 589
Score = 26.6 bits (56), Expect(2) = 0.18
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPP 943
P PP H+ P PPPP
Sbjct: 35 PPPPSHQPYSYPPPPPP 51
Score = 25.8 bits (54), Expect(2) = 0.18
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 728 PXXXPXXPPPPPPXHQ 775
P P PPPPP HQ
Sbjct: 26 PPSLPPPVPPPPPSHQ 41
Score = 23.8 bits (49), Expect(3) = 1.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 749 PPPPPPXH 772
PPPPPP H
Sbjct: 47 PPPPPPPH 54
Score = 21.8 bits (44), Expect(3) = 1.4
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 728 PXXXPXXPPPPP 763
P P PPPPP
Sbjct: 42 PYSYPPPPPPPP 53
Score = 21.8 bits (44), Expect(3) = 1.4
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPP 943
P P Q P PPPP
Sbjct: 61 PHYPQFNQLQAPPPPPP 77
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/79 (24%), Positives = 19/79 (24%)
Frame = +2
Query: 740 PXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPXHKQX 919
P PP PP PP P PP
Sbjct: 475 PPPPPLPPAVMPLKHFAPPPPTPPAFKPLKGSAPPPPPPPPLPTTIAAPPPPPPPPRAAV 534
Query: 920 XPPXPPPPXXGGGRXPXPP 976
PP PPPP P PP
Sbjct: 535 APPPPPPPPGTAAAPPPPP 553
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = +2
Query: 728 PXXXPXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPX 907
P PPPPPP PP P PP
Sbjct: 502 PLKGSAPPPPPPPPLPTTIAAPPPPPPPPRAAVAPPPPPPPPGTAAAPPP-----PPPPP 556
Query: 908 HKQXXPPXPPPPXXGGGRXPXPP 976
Q PP PPPP R P PP
Sbjct: 557 GTQAAPPPPPPPPM-QNRAPSPP 578
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 889 PPXXPXTQTXXXXPPPPPXXGXRXRPP 969
PP P T PPPPP G + PP
Sbjct: 537 PPPPPPPGTAAAPPPPPPPPGTQAAPP 563
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 889 PPXXPXTQTXXXXPPPPPXXGXRXRPP 969
PP P TQ PPPPP PP
Sbjct: 552 PPPPPGTQAAPPPPPPPPMQNRAPSPP 578
>At1g24150.1 68414.m03047 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 725
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P P PP PPP G P PP
Sbjct: 250 PIPVKQSATPPPPPPPKLKNNGPSPPPP 277
Score = 25.0 bits (52), Expect(3) = 0.31
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPP 943
P PP K P PPPP
Sbjct: 262 PPPPKLKNNGPSPPPPP 278
Score = 23.0 bits (47), Expect(3) = 0.31
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 740 PXXPPPPPP 766
P PPPPPP
Sbjct: 241 PTPPPPPPP 249
Score = 21.8 bits (44), Expect(3) = 0.31
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 749 PPPPPPXHQXN 781
PPPPPP + N
Sbjct: 260 PPPPPPKLKNN 270
>At4g18570.1 68417.m02749 proline-rich family protein common family
members: At3g25690, At4g04980, At5g61090 [Arabidopsis
thaliana]
Length = 642
Score = 31.5 bits (68), Expect = 0.88
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 890 RPXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
R PP K PP PPPP + P PP
Sbjct: 300 RADPPPQKSIPPPPPPPPPPLLQQPPPPP 328
Score = 29.5 bits (63), Expect(2) = 0.51
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 750 PPPPPQXTXKTXPPXHXXGXAPPP 821
PPPPP + PP APPP
Sbjct: 313 PPPPPPPLLQQPPPPPSVSKAPPP 336
Score = 21.4 bits (43), Expect(2) = 0.51
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3
Query: 927 PXPPPPPR 950
P PPPPP+
Sbjct: 337 PPPPPPPK 344
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 31.9 bits (69), Expect = 0.67
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP ++ PP PPPP P PP
Sbjct: 33 PPPPLMRRRAPPPPPPPLMRRRAPPPPP 60
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +2
Query: 893 PXPPXHKQXXP-PXPPPPXXGGGRXPXPP 976
P PP ++ P P PPPP R P PP
Sbjct: 18 PPPPLMRRRAPLPPPPPPPLMRRRAPPPP 46
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP + P PPPP R P PP
Sbjct: 32 PPPPPLMRRRAPPPPPPPLMRRRAPPPP 59
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 31.9 bits (69), Expect = 0.67
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGG 955
P PP Q PP PPPP GG
Sbjct: 269 PPPPGSWQPSPPPPPPPVSGG 289
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPPXS 982
P P PP PPPP P PP S
Sbjct: 30 PPPSDSSSPSPPAPPPPDDSSNGSPQPPSS 59
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 508 PPPXGXGGXXXXPXPPXPPTKKXGXXXGAXAXPXP-PXRG 624
PPP G P PP PP KK G + + P P P RG
Sbjct: 256 PPPPIKKGSSPSP-PPPPPVKKVGALSSSASKPPPAPVRG 294
Score = 24.6 bits (51), Expect(2) = 8.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 899 PPXHKQXXPPXPPPP 943
PP KQ P PPPP
Sbjct: 228 PPQVKQSEPTPPPPP 242
Score = 21.8 bits (44), Expect(2) = 8.8
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 923 PPXPPPPXXGGGRXPXPP 976
P PPP G P PP
Sbjct: 254 PSPPPPIKKGSSPSPPPP 271
>At5g07760.1 68418.m00888 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 853
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP ++ P PPPP R P PP
Sbjct: 29 PPPPPMRRRAPLPPPPPPPMRRRAPLPP 56
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P P + PP PPPP P PP
Sbjct: 31 PPPMRRRAPLPPPPPPPMRRRAPLPPPP 58
Score = 27.1 bits (57), Expect(2) = 0.84
Identities = 18/76 (23%), Positives = 21/76 (27%)
Frame = +2
Query: 740 PXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPXHKQX 919
P PPPPPP + + PP PP +
Sbjct: 39 PLPPPPPPPMRRRAPLPPPPPPAMRRRVLPRPPPPPPPLPMFDAEVLCCC--YPPTRVRR 96
Query: 920 XPPXPPPPXXGGGRXP 967
P PPPP G P
Sbjct: 97 EAPLPPPPLIFVGAPP 112
Score = 23.0 bits (47), Expect(2) = 0.84
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 719 GGXPXXXPXXPPPPP 763
G P P PPPPP
Sbjct: 19 GRVPLPPPPPPPPPP 33
>At5g62640.1 68418.m07862 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 520
Score = 29.1 bits (62), Expect(2) = 0.88
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 893 PXPPXHKQXX--PPXPPPPXXGGGRXPXPP 976
P PP +Q PP PPPP P PP
Sbjct: 223 PGPPPKEQDFVRPPLPPPPQLPQSSQPPPP 252
Score = 21.0 bits (42), Expect(2) = 0.88
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 740 PXXPPPPPPXHQ 775
P PP PPP Q
Sbjct: 219 PPPPPGPPPKEQ 230
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 336 GGAPPXXXFFFXGGXPPPPXGGXPXXXXXP 247
GG PP GG PPPP GG P P
Sbjct: 676 GGGPPPPPPPPGGGPPPPPGGGPPPPPPPP 705
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Frame = +2
Query: 890 RPXPPXHKQXXPPXPP----PPXXGGGRXPXPP 976
RP P PP PP PP GGG P PP
Sbjct: 671 RPPLPGGGPPPPPPPPGGGPPPPPGGGPPPPPP 703
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 750 PPPPPQXTXKTXPPXHXXGXAPPP 821
PPPPP PP G PPP
Sbjct: 679 PPPPPPPPGGGPPPPPGGGPPPPP 702
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/72 (25%), Positives = 18/72 (25%)
Frame = +2
Query: 728 PXXXPXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPX 907
P P PPPPPP PP P PP
Sbjct: 380 PPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPS 439
Query: 908 HKQXXPPXPPPP 943
PP PP P
Sbjct: 440 PPYVYPPPPPSP 451
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPPXS 982
P PP PP PPPP P PP S
Sbjct: 390 PPPPPPPPPPPPPPPPPPYVYPSPPPPPPS 419
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 377 PSPPPPPPPPPPPPPPPPPPPPPPPPPP 404
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 379 PPPPPPPPPPPPPPPPPPPPPPPPPPPP 406
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 380 PPPPPPPPPPPPPPPPPPPPPPPPPPPP 407
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 387 PPPPPPPPPPPPPPPPPPPPPYVYPSPP 414
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP PP PPPP P PP
Sbjct: 389 PPPPPPPPPPPPPPPPPPPYVYPSPPPP 416
>At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family
protein similar to extensin [Catharanthus roseus]
gi|1486263|dbj|BAA13175; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 96
Score = 24.6 bits (51), Expect(3) = 1.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 728 PXXXPXXPPPPPP 766
P P PPPPPP
Sbjct: 45 PPISPPPPPPPPP 57
Score = 22.6 bits (46), Expect(3) = 1.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 740 PXXPPPPPPXH 772
P PPPPP H
Sbjct: 51 PPPPPPPPQSH 61
Score = 21.0 bits (42), Expect(3) = 1.2
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPP 943
P PP K PPPP
Sbjct: 70 PPPPPSKYGRVYPPPPP 86
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/78 (24%), Positives = 19/78 (24%)
Frame = +2
Query: 749 PPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPXHKQXXPP 928
PPPPPP H P P PP H P
Sbjct: 534 PPPPPPVHSPPPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPPPV 593
Query: 929 XPPPPXXGGGRXPXPPXS 982
PPP P P S
Sbjct: 594 HSPPPPAPVHSPPPPVHS 611
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P + PPPPP PP H PPP
Sbjct: 526 PPPPVYSPPPPPPPVHSPPPPVH--SPPPPP 554
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 24.6 bits (51), Expect(2) = 1.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 728 PXXXPXXPPPPPP 766
P P PPPPPP
Sbjct: 1114 PLSPPPSPPPPPP 1126
Score = 24.2 bits (50), Expect(2) = 1.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 740 PXXPPPPPPXHQ 775
P PPPPPP Q
Sbjct: 1119 PSPPPPPPPPSQ 1130
>At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family
protein similar to SWISS-PROT:Q15428
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 890 RPXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
+P PP PP PPPP G P PP
Sbjct: 241 QPPPPPPSGLFPP-PPPPMANNGFRPMPP 268
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 750 PPPPPQXTXKTXPPXHXXGXAPPP 821
PPPPP PP G PPP
Sbjct: 231 PPPPPPPHQAQPPPPPPSGLFPPP 254
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 26.2 bits (55), Expect(2) = 2.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPP 943
P P H PP PPPP
Sbjct: 718 PTPIVHTSSPPPPPPPP 734
Score = 22.2 bits (45), Expect(2) = 2.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 740 PXXPPPPPPXH 772
P PPPPP H
Sbjct: 690 PPPPPPPPMQH 700
>At1g26240.1 68414.m03201 proline-rich extensin-like family protein
similar to hydroxyproline-rich glycoprotein precursor
gi|727264|gb|AAA87902; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 478
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +3
Query: 705 THXXXGGGPXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
TH P + PPPP K+ PP +PPP
Sbjct: 44 THIYSSPPPPPYVYSSPPPPPYIYKSPPPPPYVYSSPPP 82
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 53 PPYVYSSPPPPPYIYKSPPPPPYVYSSPPPP 83
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 73 PPYVYSSPPPPPYIYKSPPPPPYVYSSPPPP 103
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 93 PPYVYSSPPPPPYIYKSPPPPPYVYSSPPPP 123
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 113 PPYVYSSPPPPPYVYKSPPPPPYVYNSPPPP 143
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 133 PPYVYNSPPPPPYVYKSPPPPPYVYSSPPPP 163
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 153 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 183
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 173 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 203
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 193 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 223
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 213 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 243
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 233 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 263
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 253 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 283
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 273 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 303
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 293 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 323
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 313 PPYVYSSPPPPPYVYKSPPPPPYVYNSPPPP 343
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 373 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 403
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 393 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 423
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 413 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 443
>At1g15830.1 68414.m01900 expressed protein
Length = 483
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 508 PPPXGXGGXXXXPXPPXPPTKKXGXXXGAXAXPXPPXRGG 627
PPP GG P P PP + G P PP RGG
Sbjct: 108 PPPNRGGGETVIPGAP-PPIRGGGGEPAIPGAP-PPKRGG 145
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 511 PPXGXGGXXXXPXPPXPPTKKXGXXXGAXAXPXPPXRGG 627
PP GG P PP K+ G PP RGG
Sbjct: 139 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGG 177
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 511 PPXGXGGXXXXPXPPXPPTKKXGXXXGAXAXPXPPXRGG 627
PP GG P PP K+ G PP RGG
Sbjct: 155 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGG 193
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 511 PPXGXGGXXXXPXPPXPPTKKXGXXXGAXAXPXPPXRGG 627
PP GG P PP K+ G PP RGG
Sbjct: 171 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGG 209
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 511 PPXGXGGXXXXPXPPXPPTKKXGXXXGAXAXPXPPXRGG 627
PP GG P PP K+ G PP RGG
Sbjct: 187 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGG 225
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 508 PPPXGXGGXXXXPXPPXPPTKKXGXXXGAXAXPXPPXRGG 627
PP G GG P P P K+ G PP RGG
Sbjct: 220 PPKRGGGGEPVIPGAPLP--KRGGGGESVVPGAPPPKRGG 257
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 511 PPXGXGGXXXXPXPPXPPTKKXGXXXGAXAXPXPPXRGG 627
PP GG P PP K+ G PP RGG
Sbjct: 123 PPPIRGGGGEPAIPGAPPPKRGGGGEPVIPGAPPPKRGG 161
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 511 PPXGXGGXXXXPXPPXPPTKKXGXXXGAXAXPXPPXRGG 627
P G GG P P PP + G PP RGG
Sbjct: 237 PKRGGGGESVVPGAP-PPKRGGGVIVNGGCETVPPGRGG 274
>At3g22070.1 68416.m02785 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 178
Score = 24.6 bits (51), Expect(2) = 2.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 750 PPPPPQXTXKTXPPXHXXGXAPPP 821
PPPP T PP PPP
Sbjct: 124 PPPPDLDTTTAPPPPSTDIPIPPP 147
Score = 23.8 bits (49), Expect(2) = 2.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 918 TXXPXPPPPPRXEXAXP 968
T P PPPPP A P
Sbjct: 140 TDIPIPPPPPAPVSASP 156
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/76 (23%), Positives = 20/76 (26%)
Frame = +2
Query: 749 PPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPXHKQXXPP 928
PPPPPP + + P P PP H P
Sbjct: 518 PPPPPPVYSPPPPPPVYSPPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPV 577
Query: 929 XPPPPXXGGGRXPXPP 976
PPP P PP
Sbjct: 578 HSPPPPVYS--PPPPP 591
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -2
Query: 291 PPPPXGGXPXXXXXPXXFFKKKKXXPXKTPPPP 193
PPPP P P P K+PPPP
Sbjct: 632 PPPPVHSPPPPVYSPPPPVYSPPPPPVKSPPPP 664
Score = 24.2 bits (50), Expect(2) = 3.1
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP H P PPP P PP
Sbjct: 618 PPPPVHSPPPPVFSPPPPV---HSPPPP 642
Score = 23.8 bits (49), Expect(2) = 3.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 749 PPPPPPXH 772
PPPPPP H
Sbjct: 616 PPPPPPVH 623
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP P PPPP G + P PP
Sbjct: 400 PKPPPPPGPKGPRPPPPMSLGPKAPRPP 427
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 923 PPXPPPPXXGGGRXPXPP 976
PP PPP GG + P PP
Sbjct: 389 PPPAPPPGSGGPKPPPPP 406
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPP---PPXXGGGRXPXPP 976
P P PP PP PP GG P PP
Sbjct: 375 PAPQMPSSAGPPRPPPPAPPPGSGGPKPPPP 405
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P PP P PPPP G + P PP
Sbjct: 400 PKPPPPPGPKGPRPPPPMSLGPKAPRPP 427
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 923 PPXPPPPXXGGGRXPXPP 976
PP PPP GG + P PP
Sbjct: 389 PPPAPPPGSGGPKPPPPP 406
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPP---PPXXGGGRXPXPP 976
P P PP PP PP GG P PP
Sbjct: 375 PAPQMPSSAGPPRPPPPAPPPGSGGPKPPPP 405
>At5g10060.1 68418.m01165 expressed protein
Length = 469
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 719 GGXPXXXPXXPPPPPPXH 772
G P P PPPPPP H
Sbjct: 414 GNIPLMPPGLPPPPPPPH 431
>At5g07770.1 68418.m00889 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 722
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +2
Query: 893 PXP-PXHKQXXPPXPPPPXXGGGRXPXPP 976
P P P + P PPPP GG P PP
Sbjct: 626 PYPLPRLVRVGSPSPPPPSMSGGAPPPPP 654
>At1g26250.1 68414.m03202 proline-rich extensin, putative similar to
extensin gi|1165322|gb|AAB53156; contains proline-rich
extensin domains, INTERPRO:IPR002965
Length = 443
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P + PPPPP ++ PP +PPP
Sbjct: 162 PPPYVYSPPPPPPYVYQSPPPPPYVYSSPPP 192
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + +PPP
Sbjct: 323 PPYVYTSPPPPPYVYKSPPPPPYVDSYSPPP 353
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 63 PPYIYSSPPPPPYVYSSPPPPPYVYNSPPPP 93
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 73 PPYVYSSPPPPPYVYNSPPPPPYVYSSPPPP 103
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 93 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 123
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 113 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 143
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 123 PPYVYKSPPPPPYVYSSPPPPPYVYSSPPPP 153
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 143 PPYVYSSPPPPPYVYKSPPPPPYVYSPPPPP 173
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 163 PPYVYSPPPPPPYVYQSPPPPPYVYSSPPPP 193
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 183 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 213
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 203 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 233
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 223 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 253
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 243 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 273
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 263 PPYVYSSPPPPPYVYKSPPPPPYVYSSPPPP 293
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 273 PPYVYKSPPPPPYVYSSPPPPPYVYSSPPPP 303
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 283 PPYVYSSPPPPPYVYSSPPPPPYVYSSPPPP 313
>At1g72790.1 68414.m08415 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 561
Score = 25.0 bits (52), Expect(2) = 4.1
Identities = 16/68 (23%), Positives = 19/68 (27%)
Frame = +2
Query: 740 PXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPXHKQX 919
P PPPPPP + ++ P P P
Sbjct: 394 PPPPPPPPPPERRYESRASTSKLRKAPVESRTSKPNPPAKVTQYVGTGSESPLMP----I 449
Query: 920 XPPXPPPP 943
PP PPPP
Sbjct: 450 PPPPPPPP 457
Score = 22.6 bits (46), Expect(2) = 4.1
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 719 GGXPXXXPXXPPPPPP 766
G P PPPPPP
Sbjct: 356 GSDPPLVYSPPPPPPP 371
>At4g33660.1 68417.m04781 expressed protein
Length = 76
Score = 24.2 bits (50), Expect(2) = 4.3
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 508 PPPXGXGGXXXXPXPPXPP 564
PPP G P PP PP
Sbjct: 21 PPPVGVPPQYYPPPPPPPP 39
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 544 PXPPXPPTKKXGXXXGAXA 600
P PP PP +K G G A
Sbjct: 37 PPPPPPPPRKVGFLEGLLA 55
>At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 162
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P P PP PPPP P PP
Sbjct: 42 PCSPVQSSPPPPSPPPPSTPTTACPPPP 69
Score = 25.8 bits (54), Expect(2) = 4.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGG 958
P P PP P PP GGG
Sbjct: 56 PPPSTPTTACPPPPSPPSSGGG 77
Score = 21.8 bits (44), Expect(2) = 4.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 932 PPPPXXGGGRXPXPP 976
PPP GGG PP
Sbjct: 83 PPPSQSGGGSKYPPP 97
>At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|P27048 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Mus musculus}
Length = 254
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -2
Query: 336 GGAPPXXXFFFXGGXPPPPXGGXPXXXXXPXXFFKKKKXXPXKTPPP 196
G PP F GG PPPP G P P + ++ P PPP
Sbjct: 159 GQMPPQPPFAGQGG-PPPPYGMRPPYPGPPPPQYGGQQ-RPMMIPPP 203
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXP 967
P PP + P PPPP GG + P
Sbjct: 173 PPPPYGMRPPYPGPPPPQYGGQQRP 197
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 29.1 bits (62), Expect = 4.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 329 PPPXXFFFFXGXXPPPP 279
PPP F++F PPPP
Sbjct: 95 PPPPRFYYFESTPPPPP 111
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 750 PPPPPQXTXKTXPPXHXXGXAPPPXXTXXH 839
PPPPP K PP +PPP T H
Sbjct: 68 PPPPPH---KHSPPPLSQSLSPPPLITVIH 94
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 902 PXHKQXXPPXPPPPXXGGGRXPXPPXS 982
P H PP P PP R P PP S
Sbjct: 61 PLHLHHNPPSPSPPPPPPPRPPPPPLS 87
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P + PPPPP + PP +PPP
Sbjct: 438 PSPPVYSPPPPPSIHYSSPPPPPVHHSSPPP 468
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPPPXXGGGRXPXPP 976
P P + PP PPPP + P PP
Sbjct: 608 PPPTYYATQSPPPPPPPTYYAVQSPPPP 635
>At5g04970.1 68418.m00526 pectinesterase, putative contains
similarity to pectinesterase from Vitis vinifera
GI:15081598, Prunus persica SP|Q43062; contains Pfam
profile PF01095 pectinesterase
Length = 624
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 899 PPXHKQXXPPXPPPPXXGGGRXPXPP 976
PP H PP PPP P PP
Sbjct: 59 PPSHPPTQPPTPPPSQSPSQPSPLPP 84
>At4g34150.1 68417.m04846 C2 domain-containing protein similar to
calcium-dependent protein kinase [Dunaliella
tertiolecta] GI:6644464; contains Pfam profile PF00168:
C2 domain
Length = 247
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -2
Query: 291 PPPPXGGXPXXXXXPXXFFKKKKXXPXKTPPPP 193
PPPP P P + + P + PPPP
Sbjct: 214 PPPPSSAYPPQPYPPQPSYYPQGPYPGQYPPPP 246
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/76 (26%), Positives = 20/76 (26%)
Frame = +2
Query: 749 PPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPXHKQXXPP 928
PPPPPP H PP P PP H P
Sbjct: 647 PPPPPPVHSPPPPVFSPPPPMHSPPPPVYSPP---PPVHSPPPPPVHSPPPPVHSPPPPV 703
Query: 929 XPPPPXXGGGRXPXPP 976
PPP P PP
Sbjct: 704 HSPPPPV---HSPPPP 716
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXXLXXPPPPPQXTXKTXPPXHXXGXAPPP 821
P PPPPP PP + PPP
Sbjct: 477 PPYVYSSPPPPPYVYSSPPPPPYVYSSPPPP 507
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/84 (22%), Positives = 21/84 (25%), Gaps = 1/84 (1%)
Frame = +2
Query: 728 PXXXPXXPPPPPPXHQXNXXXXXXXXXXXXXXXNQXXPPXXXXXXXXXXXXXXXRPXPPX 907
P P PPPP + PP P PP
Sbjct: 458 PPPPPSPSPPPPYVYSSPPPPYVYSSPPPPPYVYSSPPPPPYVYSSPPPPYVYSSPPPPY 517
Query: 908 -HKQXXPPXPPPPXXGGGRXPXPP 976
+ PP P PP P PP
Sbjct: 518 VYSSPPPPPPSPPPPCPESSPPPP 541
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 23.8 bits (49), Expect(2) = 6.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 749 PPPPPPXH 772
PPPPPP H
Sbjct: 639 PPPPPPLH 646
Score = 23.0 bits (47), Expect(2) = 6.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 740 PXXPPPPPP 766
P PPPPPP
Sbjct: 601 PPPPPPPPP 609
>At5g62760.2 68418.m07879 nuclear protein ZAP-related similar to
nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
cDNA provides a truncated ORF likely due to a skipped
exon. An alternative ORF is provided.
Length = 383
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -1
Query: 328 PPXXXFFFXXGXPPPPXGGXPXXXFXPXXFFQKKKXXPPXNXXPP 194
PP F + PPPP P F F PP N PP
Sbjct: 45 PPPSSFAYNPNFPPPPHLNSPRPGFDS---FTGPPVRPPQNHYPP 86
>At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to
nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
cDNA provides a truncated ORF likely due to a skipped
exon. An alternative ORF is provided.
Length = 661
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -1
Query: 328 PPXXXFFFXXGXPPPPXGGXPXXXFXPXXFFQKKKXXPPXNXXPP 194
PP F + PPPP P F F PP N PP
Sbjct: 45 PPPSSFAYNPNFPPPPHLNSPRPGFDS---FTGPPVRPPQNHYPP 86
>At5g39760.1 68418.m04816 zinc finger homeobox protein-related /
ZF-HD homeobox protein-related predicted proteins,
Arabidopsis thaliana
Length = 334
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 902 PXHKQXXPPXPPPPXXGGGRXPXPP 976
P H+ PP PPPP PP
Sbjct: 129 PHHRHHPPPPPPPPPPRSPNSASPP 153
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Frame = +2
Query: 893 PXPPXHK--QXXPPXPPPPXXGGG--RXPXPP 976
P PP +K + PP PPPP R P PP
Sbjct: 194 PPPPPYKYGRVYPPPPPPPQAARSYKRSPPPP 225
>At5g13860.1 68418.m01620 tumour susceptibility gene 101 (TSG101)
family protein similar to SP|Q99816 Tumor susceptibility
gene 101 protein {Homo sapiens}; contains Pfam profile
PF05743: Tumour susceptibility gene 101 protein (TSG101)
Length = 368
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +2
Query: 899 PPXHKQXXPPXPPPPXXGGG-RXPXPP 976
PP + Q PP P P G G P PP
Sbjct: 156 PPLYSQRRPPPQPSPSIGSGYSRPLPP 182
>At4g15200.1 68417.m02329 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 600
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 899 PPXHKQXXPPXPPPPXXGGGRXPXPP 976
PP PP PPPP + P PP
Sbjct: 266 PPPPAAAPPPQPPPPPPPKPQPPPPP 291
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 24.2 bits (50), Expect(2) = 9.1
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 893 PXPPXHKQXXPPXPPP 940
P PP + PP PPP
Sbjct: 101 PSPPPPRPLPPPPPPP 116
Score = 22.2 bits (45), Expect(2) = 9.1
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 728 PXXXPXXPPPPPPXHQ 775
P P PPPPP Q
Sbjct: 61 PLPPPPQTPPPPPPPQ 76
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.310 0.144 0.473
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,880,745
Number of Sequences: 28952
Number of extensions: 311566
Number of successful extensions: 4983
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3456
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2382734760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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