Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P13
(937 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 43 5e-05
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 42 9e-05
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 42 2e-04
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 38 0.003
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 37 0.005
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 36 0.008
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 36 0.008
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 35 0.014
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 34 0.025
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 33 0.058
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 33 0.076
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 33 0.076
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 33 0.076
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 32 0.10
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 31 0.18
SPAC16E8.11c |tfb1||transcription factor TFIIH complex subunit T... 31 0.18
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 31 0.31
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 30 0.41
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 30 0.41
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 30 0.54
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.54
SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyc... 30 0.54
SPCC1906.02c |||CUE domain protein Cue3 |Schizosaccharomyces pom... 29 0.71
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 29 0.71
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 29 0.94
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 29 0.94
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 29 0.94
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 29 1.2
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 29 1.2
SPAC139.06 |hat1|SPAC23C4.01|histone acetyltransferase Hat1|Schi... 29 1.2
SPAC6F6.12 |||autophagy associated protein Atg24|Schizosaccharom... 28 1.6
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 28 1.6
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 28 1.6
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 28 1.6
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 28 1.6
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 28 2.2
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 2.2
SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch... 27 2.9
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 27 2.9
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 27 2.9
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 27 2.9
SPBC216.01c ||SPBC713.13c|DNA damage response protein |Schizosac... 27 3.8
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 27 5.0
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 27 5.0
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 27 5.0
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 26 6.6
SPBC1604.07 |atp4||F0-ATPase subunit|Schizosaccharomyces pombe|c... 26 6.6
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 6.6
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 26 6.6
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 26 8.8
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 26 8.8
SPAC6F12.08c |||exocyst complex subunit Exo84|Schizosaccharomyce... 26 8.8
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 43.2 bits (97), Expect = 5e-05
Identities = 37/187 (19%), Positives = 83/187 (44%), Gaps = 3/187 (1%)
Frame = +3
Query: 138 KYTYRSSGGGTTDVN---IEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLS 308
KY + ++V +E + L+A+ L R I D E E+ +R + A++
Sbjct: 837 KYELKKQQNSKSEVERDLVETNNSLTAVENLLTTERAIALDKE---EILRRTQERLANIE 893
Query: 309 VQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLEDVHLESEETXHLLKKKNQEIV 488
+ ++ E + + S +IN + ++ELL+ +E + E E L + +++
Sbjct: 894 DSFSETKQQNENLQRESASLKQINNELESELLEKTSKVETLLSEQNELKEKLSLEEKDL- 952
Query: 489 IDFQEQIDQLTKTKARAEKEKSKFQAEVYELLAQVENVTKEKITISKTCERLEITISELH 668
+D + +++ L + A EK++F + L + E ++K + I E+
Sbjct: 953 LDTKGELESLRENNATVLSEKAEFNEQCKSLQETIVTKDAELDKLTKYISDYKTEIQEMR 1012
Query: 669 IKIEELN 689
+ +++N
Sbjct: 1013 LTNQKMN 1019
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 42.3 bits (95), Expect = 9e-05
Identities = 35/177 (19%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Frame = +3
Query: 228 KIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLK 407
+++ +++++++ +E +E+ S+Q +L+E L+ ++ E Q ++ K ELL
Sbjct: 607 QLKSLREEIDNTKEALDLSVKER---SIQEEKLNESLKTSKTNLEEQTQLAEKYHEELLD 663
Query: 408 LRKLLEDVHLE----------SEETXHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSK 557
++ L D+ +E EE +L++ ++ + DF E+ +LTK + +
Sbjct: 664 NQQKLYDLRIELDYTKSNCKQMEEEMQVLREGHESEIKDFIEEHSKLTKQLDDIKNQFGI 723
Query: 558 FQAEVYELLAQVENVTKEKITISKTCERLEITISELHIKIEELNRTIVDITSHKQRL 728
++ +LL+++E +++ + + ++L++ E+LN+ D S K +
Sbjct: 724 ISSKNRDLLSELEKSKSLNNSLAALESKNKKLENDLNLLTEKLNKKNADTESFKNTI 780
Score = 40.7 bits (91), Expect = 3e-04
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 6/172 (3%)
Frame = +3
Query: 210 LSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKR 389
L E+ I +++ L E Q ++ + Q+ L+ER+ A S IN+ +
Sbjct: 794 LGNKENIISDLKNKLSEESTRLQELQSQLNQDKNQIETLNERISAAADELSSMESINKNQ 853
Query: 390 DTELLKLRKLLEDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSKFQAE 569
E LKL K E + L K++ E + ++ ++ TKT + KE ++E
Sbjct: 854 ANE-LKLAKQKCSNLQEKINFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELKTVKSE 912
Query: 570 VYELLAQVEN--VTKEKITISKTCERLEITISELHIKI----EELNRTIVDI 707
+ L V N KEK ++ + + ++E + K+ EE+ R VDI
Sbjct: 913 -NDSLKSVSNDDQNKEKSVNNEKFKEVSQALAEANEKLNARDEEIERLKVDI 963
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 41.5 bits (93), Expect = 2e-04
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Frame = +3
Query: 252 LESERELRQRIEREKADLSV-QVIQLSERLE-EAEGGAESQFEINRKRDTELLKLRKLLE 425
+E+ R I+++ D +V +I+ +LE E +G E +K +TEL +L K
Sbjct: 629 VENANYSRSLIQKKTTDETVGSLIEKVGKLEYEVQGTLEEATSYYQK-NTELQQLLK--- 684
Query: 426 DVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSKFQAEVYELLAQVENVT 605
++E LLK +N+++ +D+ D+L + Q E L +Q+ ++
Sbjct: 685 ----QNESASELLKSRNEKLCVDY----DKLRSVFEEDSSKILSLQKENENLQSQILQIS 736
Query: 606 KEKITISKTCERLEITISELHIKIEELN 689
+E + CE LE EL K+ E++
Sbjct: 737 EELVDYRSRCEALEYGNYELETKLIEMH 764
Score = 32.3 bits (70), Expect = 0.10
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 14/190 (7%)
Frame = +3
Query: 195 ADLSALSRLEDKIRLIQDDLESERE----LRQR---IEREKADLSVQVIQLSERLEEAEG 353
A SAL I +D L ER+ L+Q+ ++ E ++ +++ L R E E
Sbjct: 776 ASASALDVSNTAILSFEDSLRRERDEKSTLQQKCLNLQYEYENVRIELENLQSRALELES 835
Query: 354 GAESQFEINRKRDTELLK--LRKLLEDVHLESEETXHLLKKKNQEIVIDFQ-EQIDQLTK 524
E Q + K +++ L KLL ++ + K K + ++ Q E + +L +
Sbjct: 836 ALE-QSVSDAKYSKAIMQSGLSKLLSSINENKDNLKEFSKSKQKISYLESQLEGLHELLR 894
Query: 525 TKAR----AEKEKSKFQAEVYELLAQVENVTKEKITISKTCERLEITISELHIKIEELNR 692
R KE Q ++Y+L +V EK +S L K+ E+
Sbjct: 895 ESQRLCEGRTKELLNSQQKLYDLKHSYSSVMTEKSKLSDQVNDLTEQAKITQRKLSEVQI 954
Query: 693 TIVDITSHKQ 722
+ D ++Q
Sbjct: 955 ALADSKMNQQ 964
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 37.5 bits (83), Expect = 0.003
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Frame = +3
Query: 213 SRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRD 392
S D ++ ++ E + ++R E+E AD ++ L +A+G E N +++
Sbjct: 1473 SASSDAEQITKEQFEQLKSEKERTEKELADSKNELEHLQSEAVDADGKTEIS---NLEKE 1529
Query: 393 TELLKLRK--LLEDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSKFQA 566
L+ K L++ V S E L + + + E D++ + +++ E K ++
Sbjct: 1530 IHELRSDKEGLVQQVQNLSAELAALREHSPTQGSL---ENADEIARLRSQLESTKQYYEK 1586
Query: 567 E-VYELLAQVENVTKEKITISKTCERLEITISELHIKIEEL 686
E E+LA + EK KT E LE ++E +I+EL
Sbjct: 1587 EKETEILAARSELVAEK---EKTKEELENQLNEKSQRIKEL 1624
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 36.7 bits (81), Expect = 0.005
Identities = 37/183 (20%), Positives = 74/183 (40%)
Frame = +3
Query: 210 LSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKR 389
L L +IRL +D L+ + L +E ++ + L + E E + + +RK
Sbjct: 1399 LDHLNQEIRLKEDVLKEKESLIISLEESLSNQRQKESSLLDAKNELEHMLD---DTSRKN 1455
Query: 390 DTELLKLRKLLEDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSKFQAE 569
+ + K+ + + +S E ++K + E + + K++ ++ K K Q +
Sbjct: 1456 SSLMEKIESINSSLDDKSFELASAVEKLGALQKLH-SESLSLMENIKSQLQEAKEKIQVD 1514
Query: 570 VYELLAQVENVTKEKITISKTCERLEITISELHIKIEELNRTIVDITSHKQRLSPENXEL 749
+ +T K + I +L IE+LN + + S +RLS E
Sbjct: 1515 ESTIQELDHEITASKNNYEGKLNDKDSIIRDLSENIEQLNNLLAEEKSAVKRLSTEKESE 1574
Query: 750 VXQ 758
+ Q
Sbjct: 1575 ILQ 1577
Score = 28.7 bits (61), Expect = 1.2
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 11/210 (5%)
Frame = +3
Query: 135 SKYTYRSSGGGTTDVNIEYSADLSALSRL--EDKIRLIQDDLESERELRQRIEREKADLS 308
SK Y + + S ++ L+ L E+K + + E E E+ Q R ADL
Sbjct: 1528 SKNNYEGKLNDKDSIIRDLSENIEQLNNLLAEEKSAVKRLSTEKESEILQFNSR-LADLE 1586
Query: 309 VQVIQLSE-----RLEEAEGGAESQFEINRKRD--TELLKLRKLLEDVHLESEETXHLLK 467
Q+ +L+ A E Q N + T +L L+ ++D+ + L+
Sbjct: 1587 YHKSQVESELGRSKLKLASTTEELQLAENERLSLTTRMLDLQNQVKDLSNIKDSLSEDLR 1646
Query: 468 --KKNQEIVIDFQEQIDQLTKTKARAEKEKSKFQAEVYELLAQVENVTKEKITISKTCER 641
+ ++ V Q++ + T + + QA EL +V + CE
Sbjct: 1647 TLRSLEDSVASLQKECKIKSNTVESLQDVLTSVQARNAELEDEVSRSVDKIRRRDDRCEH 1706
Query: 642 LEITISELHIKIEELNRTIVDITSHKQRLS 731
L + +LH ++EE + T + +QR++
Sbjct: 1707 LSGKLKKLHSQLEEQHETF--FRAEQQRMT 1734
Score = 28.3 bits (60), Expect = 1.6
Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 5/203 (2%)
Frame = +3
Query: 168 TTDVNI-EYSADLSALSRLEDKIRLIQDDLESE-RELRQRIEREKADLSVQVIQLSERLE 341
TTD + ADL L D + + DLE ++ + R++A+++ + L E E
Sbjct: 1313 TTDAEFTKVVADLEKLQHEHDDWLIQRGDLEKALKDSEKNFLRKEAEMTENIHSLEEGKE 1372
Query: 342 EAEGGAESQFEINRKRDTELLKLRKLLEDVHLESEETXHLLKKKNQEIVI--DFQEQIDQ 515
E + E+ +L LED L + + + L NQEI + D ++ +
Sbjct: 1373 ETK--------------KEIAELSSRLEDNQLATNKLKNQLDHLNQEIRLKEDVLKEKES 1418
Query: 516 LTKTKARAEKEKSKFQAEVYELLAQVENVTKE-KITISKTCERLEITISELHIKIEELNR 692
L + + + + ++ + + ++E++ + S E++E S L K EL
Sbjct: 1419 LIISLEESLSNQRQKESSLLDAKNELEHMLDDTSRKNSSLMEKIESINSSLDDKSFEL-A 1477
Query: 693 TIVDITSHKQRLSPENXELVXQV 761
+ V+ Q+L E+ L+ +
Sbjct: 1478 SAVEKLGALQKLHSESLSLMENI 1500
Score = 27.1 bits (57), Expect = 3.8
Identities = 43/206 (20%), Positives = 78/206 (37%), Gaps = 4/206 (1%)
Frame = +3
Query: 180 NIEYSADLSALSRLEDKIRLIQDD----LESERELRQRIEREKADLSVQVIQLSERLEEA 347
N + + LS +S + + LI LE + + IE+ L + Q + LEE
Sbjct: 1041 NDDLQSKLSVVSSEYENLLLISSQTNKSLEDKTNQLKYIEKNVQKLLDEKDQRNVELEEL 1100
Query: 348 EGGAESQFEINRKRDTELLKLRKLLEDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKT 527
E N + ELL LRK + H LK+K+ + ++QLT
Sbjct: 1101 TSKYGKLGEENAQIKDELLALRKKSKKQHDLCANFVDDLKEKS--------DALEQLTNE 1152
Query: 528 KARAEKEKSKFQAEVYELLAQVENVTKEKITISKTCERLEITISELHIKIEELNRTIVDI 707
K + + L+ + ++ + K+ + IS + + +N + +
Sbjct: 1153 KNELIVSLEQSNSNNEALVEERSDLANRLSDMKKSLSDSDNVISVIRSDLVRVNDELDTL 1212
Query: 708 TSHKQRLSPENXELVXQVXDLXVTLR 785
K LS + E+ DL +L+
Sbjct: 1213 KKDKDSLSTQYSEVCQDRDDLLDSLK 1238
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 35.9 bits (79), Expect = 0.008
Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Frame = +3
Query: 228 KIRLIQDDL-ESERELRQRIEREKADLSVQVIQLSERLEEAEGGAE-SQFEINRKRDTEL 401
K+R ++ +L E E + + + ++ D++++ + + E+ + S E N + T +
Sbjct: 70 KLRDLEKNLAEEEVRITEMLTIQRQDIAIERRKNTNCFSESSQVDQYSVTETNLQYATNI 129
Query: 402 -LKLRKLLEDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSKFQAEVYE 578
L L + L + L+ E L KK + + +Q+D L+ KEK+K Q + +
Sbjct: 130 GLNLLQQLRYLRLQLSEKEDLHKKLSVDNA-HLIKQLDLLSSNMKTLMKEKTKVQGQ-RD 187
Query: 579 LLAQVENVTKEKITISKTCERLEITISELHIKIEELNRTIVDITSHKQRLSPENXELVXQ 758
LL Q +K+T E L +++++ K+ L T + I H+ +L+ E E + +
Sbjct: 188 LLEQRLQGLMKKLT---EVESLTVSLNDEKNKL-TLELTNLRICLHELQLNAEKGETIDE 243
Query: 759 VXDLXVTLRT 788
D TL T
Sbjct: 244 SEDSKNTLVT 253
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 35.9 bits (79), Expect = 0.008
Identities = 28/129 (21%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Frame = +3
Query: 372 EINRKRDTELLKLRKLLEDVHLE--SEETXHLLKKKNQEIV----IDFQEQIDQLTKTKA 533
E++ + ++ KLR++L HLE E+T L + E + I + + A
Sbjct: 325 EVDNEEHSDFPKLREMLIRTHLEELKEQTNKLYEAYRTERLLSSGISQDHSVFREVNPSA 384
Query: 534 RAEKEKSKFQAEVYELLAQVENVTKEKITISKTCERLEITISELHIKIEELNRTI----V 701
+ E+E++ + ++ ++ A+++ + +K+ + +RL+ + +EL + E+ +
Sbjct: 385 KLEEERALHEEKLMKMEAEMKTIFSQKVQEKE--DRLKQSENELRTRHREMKAALEKQKA 442
Query: 702 DITSHKQRL 728
D+ HK RL
Sbjct: 443 DLIDHKNRL 451
Score = 29.9 bits (64), Expect = 0.54
Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +3
Query: 222 EDKIRLIQDDLESE-RELRQRIEREKADLSVQVIQLSERLEEAEGGAESQ 368
ED+++ +++L + RE++ +E++KADL I RL +A+ AE++
Sbjct: 416 EDRLKQSENELRTRHREMKAALEKQKADL----IDHKNRLMQAKAAAENE 461
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 35.1 bits (77), Expect = 0.014
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Frame = +3
Query: 210 LSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKR 389
L+RL +++ I++D E++ ++ RE D QL E +EE + E+ K
Sbjct: 505 LTRLYKQLQDIEEDYENKLMRMEQQWREDVD------QLQEYVEEITQELQDTKEVLSKS 558
Query: 390 DTELLKLRKLLEDVHLESEETXHLLKK---KNQEIVIDFQEQIDQLTKTKARAEKEKSKF 560
E +++ + E+E +K +N+E + F+E++++LT + + +
Sbjct: 559 SKESDDYEEVVGKLRTEAEREIEKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDK 618
Query: 561 QAEVYEL------LAQVENVTKEKIT--ISKTCERLEITISELHI--KIEELNRTIVDIT 710
E EL L + N KE T S E+L++T +E+ K E N+ ++ +
Sbjct: 619 CHEFDELQKRLQTLEEENNKAKEDSTSKTSNLLEQLKMTEAEVDSLRKENEENKQVIALK 678
Query: 711 SHKQRLSPENXELVXQ 758
+ S +N L+ +
Sbjct: 679 ESELVKSNDNKLLLNE 694
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 34.3 bits (75), Expect = 0.025
Identities = 29/129 (22%), Positives = 62/129 (48%)
Frame = +3
Query: 228 KIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLK 407
KIR + + +++L+ E E+ + +L+E+ + A+ Q E +KR+ + LK
Sbjct: 590 KIREKEKKRDKKKQLKLAKEEERQRREAE--RLAEQAAQKALEAKRQEEARKKREEQRLK 647
Query: 408 LRKLLEDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSKFQAEVYELLA 587
+ + LE ++ K+K +E + Q+Q K AR ++ + + + + E
Sbjct: 648 REQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREK-MAREQRLREEEEKRILEERK 706
Query: 588 QVENVTKEK 614
+ E + KE+
Sbjct: 707 RREKLDKEE 715
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 33.1 bits (72), Expect = 0.058
Identities = 29/100 (29%), Positives = 49/100 (49%)
Frame = +3
Query: 270 LRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLEDVHLESEE 449
++QRI+ EKA+ + + EAE A+ + E KR+ E R+ E E+EE
Sbjct: 533 IQQRIQ-EKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEE 591
Query: 450 TXHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSKFQAE 569
++N + + + + + K K AE EK+K +AE
Sbjct: 592 KAKREAEENAKREAEEKAKREAEEKAKREAE-EKAKREAE 630
Score = 31.9 bits (69), Expect = 0.13
Identities = 25/97 (25%), Positives = 49/97 (50%)
Frame = +3
Query: 195 ADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFE 374
A+ A E+K + ++ +++RE ++ +RE + + + + + + EAE A+ + E
Sbjct: 621 AEEKAKREAEEKAKREAEE-KAKREAEEKAKREAEEKAKREAEENAK-REAEEKAKREAE 678
Query: 375 INRKRDTELLKLRKLLEDVHLESEETXHLLKKKNQEI 485
N KR+ E R+ E+ ++EE KN EI
Sbjct: 679 ENAKREAEEKVKRETEENAKRKAEEEGKREADKNPEI 715
Score = 29.9 bits (64), Expect = 0.54
Identities = 25/106 (23%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Frame = +3
Query: 255 ESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLEDVH 434
+++RE ++ +RE + + + + + EAE A+ + E KR+ E R+ E+
Sbjct: 608 KAKREAEEKAKREAEEKAKREAEEKAK-REAEEKAKREAEEKAKREAEEKAKREAEENAK 666
Query: 435 LESEETXHLLKKKNQEIVIDFQEQIDQLTKTKA-RAEKEKSKFQAE 569
E+EE ++N + + +E++ + T+ A R +E+ K +A+
Sbjct: 667 REAEEKAKREAEENAK--REAEEKVKRETEENAKRKAEEEGKREAD 710
Score = 28.3 bits (60), Expect = 1.6
Identities = 29/125 (23%), Positives = 57/125 (45%)
Frame = +3
Query: 195 ADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFE 374
A+ A E+K + ++ +++RE + +RE + + + + + EAE A+ + E
Sbjct: 573 AEEKAKREAEEKAKREAEE-KAKREAEENAKREAEEKAKREAEEKAK-REAEEKAKREAE 630
Query: 375 INRKRDTELLKLRKLLEDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKS 554
KR+ E R+ E E+EE ++N + + + + + K AE EK
Sbjct: 631 EKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEENAKREAE-EKV 689
Query: 555 KFQAE 569
K + E
Sbjct: 690 KRETE 694
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 32.7 bits (71), Expect = 0.076
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Frame = +3
Query: 405 KLRKLLEDVHLESEETXHLLKKKNQEIVIDFQEQID---QLTKTKARAEKEKSKFQ---A 566
K+R+LLE HL + ++K+++E I+ +E+ + +++ + E E K +
Sbjct: 20 KMRELLEKEHLRMTQQNAEIEKEDEEYNIEEEEEAERDIEISSESSDEEAELKKLEEEGE 79
Query: 567 EVYELLAQVENVTKEKI 617
EV ++L E + K KI
Sbjct: 80 EVEKILRDEERIKKRKI 96
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 32.7 bits (71), Expect = 0.076
Identities = 14/54 (25%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +3
Query: 210 LSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGG-AESQ 368
LS +E ++ + D +++ + +R+ERE+ +L ++++ + +L E + AES+
Sbjct: 280 LSTIEKELEELSKDQTADQAISRRLERERDELDLRLLDIQNKLSEMDSDRAESR 333
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 32.7 bits (71), Expect = 0.076
Identities = 33/170 (19%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Frame = +3
Query: 261 ERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLEDVHLE 440
E++ I K +L S +++E +E++ +I+R ++ + L+K+ E L
Sbjct: 286 EQKANSLIMEYKNELQSAEEHFSHKIKELT--SENELKISRLQEEKDSLLKKVQEGASLA 343
Query: 441 SE--ETXHLLKKKN-QEIVIDFQEQIDQLTKTKARAEKEKSKFQAEVYELLAQVENVTKE 611
+ + H L+KK Q + QE+ + L + + ++E + L + ++ +
Sbjct: 344 MQRVQNKHDLEKKRLQSAIQPLQEENNSLKQQIEQLQRELASETVVKENLKSSLDQQSAN 403
Query: 612 KITISKTCERLEITISELHIKIEELNRTIVDITSHKQRLSPENXELVXQV 761
+ T LE TI L + + I+++ + + E LV ++
Sbjct: 404 VQKLESTNRALESTIKTLEEDVYTMKNKIIELEGILKSANVERDGLVEKL 453
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 32.3 bits (70), Expect = 0.10
Identities = 28/149 (18%), Positives = 67/149 (44%)
Frame = +3
Query: 279 RIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLEDVHLESEETXH 458
R+++E +S+ ++Q ++ +E E + + + LK++K + ++
Sbjct: 80 RLKKEGDKVSILLMQERKKRKELESAKNNLLNVY-----DSLKMQKASVSSMVNRKQRA- 133
Query: 459 LLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSKFQAEVYELLAQVENVTKEKITISKTCE 638
K+ Q+I +F+ QI L + + + + E + +AE ++ E K+K + + E
Sbjct: 134 --AKEEQKIQEEFERQITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEALEEEYE 191
Query: 639 RLEITISELHIKIEELNRTIVDITSHKQR 725
L + +++ RT+ D +R
Sbjct: 192 ELRNECLKHDPQLDAEIRTLQDTFEEVER 220
Score = 28.7 bits (61), Expect = 1.2
Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Frame = +3
Query: 255 ESERELRQRIEREKADLSVQVIQLS---ERLEEAEGGAESQFEINRKR----DTELLKLR 413
+ E+++++ ER+ DL + QL ERLE A S+ E K+ + E +LR
Sbjct: 135 KEEQKIQEEFERQITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEALEEEYEELR 194
Query: 414 K--LLEDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSKFQAEVYELLA 587
L D L++E L+ +E+ +Q+ + +E +++
Sbjct: 195 NECLKHDPQLDAE--IRTLQDTFEEVERTLTKQVSDAKIADKPLKDSMFNSNSEKEKIMH 252
Query: 588 QVENVTKE----KITISKTCERLEITISELHIKIEELNRTIVDITSH 716
+E K+ I + E+LE ++ + IE + ++T+H
Sbjct: 253 ALEKAEKDADIYSEFIQQYMEQLESSLEKSSTAIENAQNRLAEMTAH 299
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 31.5 bits (68), Expect = 0.18
Identities = 39/142 (27%), Positives = 68/142 (47%)
Frame = +3
Query: 198 DLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEI 377
D L+RLE ++R ++ ++++E ++ E K + QV + + G S FEI
Sbjct: 192 DAKLLARLE-RVRAWKES-KAKQEASKK-EEHKLNTKPQVTAKDQNAMPSTG--ISGFEI 246
Query: 378 NRKRDTELLKLRKLLEDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSK 557
NR++DT +K VH++ E+ ++ N E D+QE DQ + E+ S
Sbjct: 247 NRQKDTSDMKRN---NRVHMDDEDGP---RRMNLE---DYQELWDQEDRGMLGNEQAASM 297
Query: 558 FQAEVYELLAQVENVTKEKITI 623
+ EV L A + ++ TI
Sbjct: 298 EEDEVDPLDAYMASLVGTTDTI 319
>SPAC16E8.11c |tfb1||transcription factor TFIIH complex subunit
Tfb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 477
Score = 31.5 bits (68), Expect = 0.18
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +3
Query: 255 ESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLEDVH 434
E ++ RI++E + QLSERL E G +F N + + LK D+
Sbjct: 238 ELRPDITMRIDKEALPFMKNINQLSERLLEKSLGNSKRF--NNENEETYLK-ESGFHDLE 294
Query: 435 LESEETXHLLKKKNQEIVID 494
E+ ++ +LK K Q+ +++
Sbjct: 295 EEASDSKVVLKIKGQDQLLE 314
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 30.7 bits (66), Expect = 0.31
Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 28/211 (13%)
Frame = +3
Query: 201 LSALSRLEDKIRLIQDDLESE-RELRQRIEREKADLS----------VQVIQLSERLEEA 347
L + E +R + + E+E +E RQ++ ++A +S +++ +LSE L E
Sbjct: 352 LETVKNDEKNLREMNANYETEMKEARQKLNNKEALISHYDDDFRAKELKISRLSESLREK 411
Query: 348 EGGAESQFEINRKRD----TELLKLRKLLEDVHLESEETXHLLK--KKNQEI----VIDF 497
G E Q ++ +RD ++ K +E+V ++E L K N E+ V+
Sbjct: 412 AGLLEFQSSVSEQRDLLYQEQIQSSIKDMENVFRKNEYLMEELNELKNNLEVESSKVLRL 471
Query: 498 QEQI-----DQLTK--TKARAEKEKSKFQAEVYELLAQVENVTKEKITISKTCERLEITI 656
E++ +QL++ T E+ Q ++ +++ + E+TI
Sbjct: 472 DEEMKCLKDEQLSQFDTVFSLTDERDGLQKDLKNTKGNLDDEIGRSAFLKSQIRDQELTI 531
Query: 657 SELHIKIEELNRTIVDITSHKQRLSPENXEL 749
+LH +E L++T S + +S +N EL
Sbjct: 532 EKLHDSLETLSQT---NNSLQCEISEKNAEL 559
Score = 28.3 bits (60), Expect = 1.6
Identities = 35/172 (20%), Positives = 72/172 (41%), Gaps = 3/172 (1%)
Frame = +3
Query: 183 IEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAE 362
I Y LS ++I+ DL+ E E Q ++ KA L L E LE + +
Sbjct: 304 ISYEEKLSIAQNSINEIQTQNRDLKLETEKLQ--DQIKALLERNQ-SLQEALETVKNDEK 360
Query: 363 SQFEINRKRDTELLKLRKLL---EDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKTKA 533
+ E+N +TE+ + R+ L E + ++ + K + +E+ L +
Sbjct: 361 NLREMNANYETEMKEARQKLNNKEALISHYDDDFRAKELKISRLSESLREKAGLLEFQSS 420
Query: 534 RAEKEKSKFQAEVYELLAQVENVTKEKITISKTCERLEITISELHIKIEELN 689
+E+ +Q ++ + +ENV ++ + + L+ + K+ L+
Sbjct: 421 VSEQRDLLYQEQIQSSIKDMENVFRKNEYLMEELNELKNNLEVESSKVLRLD 472
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 30.3 bits (65), Expect = 0.41
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +3
Query: 168 TTDVNIEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEA 347
+T ++ S+ S + LE+K+ +Q ++ +E + +DLS + LS++ EE
Sbjct: 540 STTFQVKKSSQKSTIQNLEEKVSYLQQFMDKNNATLTDLEFQCSDLSSSIDILSKQDEEH 599
Query: 348 E 350
E
Sbjct: 600 E 600
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 30.3 bits (65), Expect = 0.41
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 21/205 (10%)
Frame = +3
Query: 186 EYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAES 365
+Y+ + D+I+++ DLE E+E Q + +A + + L+E A
Sbjct: 346 DYAILQAKCDEFADRIQVLTADLEKEKE-NQIMHESEASIGLTDSMQVHTLQEQLHKANE 404
Query: 366 QFEINRKRDTELLKLRKLLEDVHLE---SEETXHLLKKKNQEIVID----------FQEQ 506
+ E + + + + K ED+ L+ EE +L+ K Q + D Q
Sbjct: 405 EIEFLHDQISRMNEEGKNFEDIMLQFRSLEEERDVLESKLQTLEDDNNSLRLMTSSLGNQ 464
Query: 507 IDQLTKTKARAEKEKSKFQ--------AEVYELLAQVENVTKEKITISKTCERLEITISE 662
I+ L ++EK+ + + E +++ VTKE T+ I +
Sbjct: 465 IESLRTQNREIDEEKNHLRLLASKNSDKALAETNIRLQEVTKELETLRMKNSNDLNEIHD 524
Query: 663 LHIKIEELNRTIVDITSHKQRLSPE 737
L + E L I IT K RL E
Sbjct: 525 LREENEGLTLKIDSITKEKDRLINE 549
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 29.9 bits (64), Expect = 0.54
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 363 SQFEINRKRDTELLKLRKLLEDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKTKARAE 542
SQF+++ KR L++L +DVH E + K + I+ DF + L + + E
Sbjct: 195 SQFQVSEKRT--LVRLPSF-DDVHTSEREELFIKKLEQCNIIFDFNDPSSDLASKEIKRE 251
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 29.9 bits (64), Expect = 0.54
Identities = 38/204 (18%), Positives = 87/204 (42%), Gaps = 9/204 (4%)
Frame = +3
Query: 174 DVNIEYSADL--SALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEA 347
+VN E+ ++ ++ LE +++ + E R L + E L + ++R +
Sbjct: 58 EVNHEHKENVLTKKINFLEQQLQSSNNQAEESRNLISVLRNENESLKTNLENQNKRFDAL 117
Query: 348 EGGAESQFEINRKRDTELLKLRKLLEDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKT 527
+S R+ ++EL + K+ + +++ L+ +N + Q L+
Sbjct: 118 TTENQSL----RRANSELQEQSKIASEQLSIAKDQIEALQNENSHLGEQVQSAHQALSDI 173
Query: 528 KARAEKE-----KSKFQAE--VYELLAQVENVTKEKITISKTCERLEITISELHIKIEEL 686
+ R ++ S+ + E V E A V ++ + SK CE+LE++ + +++L
Sbjct: 174 EERKKQHMFASSSSRVKEEILVQEKSALVSDLASLQSDHSKVCEKLEVSSRQ----VQDL 229
Query: 687 NRTIVDITSHKQRLSPENXELVXQ 758
+ + + L+ E +L Q
Sbjct: 230 EKKLAGLAQQNTELN-EKIQLFEQ 252
>SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 29.9 bits (64), Expect = 0.54
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = +3
Query: 219 LEDKIRLIQDDLESERELRQRIEREKADLS----VQVIQLSERLEEAE 350
L D R +++D+E E E +E+EK D++ V +Q E L A+
Sbjct: 128 LNDIFRFLREDVEEEEESPDAVEKEKKDVASEPYVNGVQSQEHLPSAK 175
>SPCC1906.02c |||CUE domain protein Cue3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 581
Score = 29.5 bits (63), Expect = 0.71
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = +3
Query: 441 SEETXHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSKFQAEVYELLA--QVENVTKEK 614
S + H +K + + DF +Q ++ KAR KE++ A++ L Q+E +
Sbjct: 446 SSKDAHDFQKFINQTLYDFYQQNPEVFDQKARKSKERADLLAKLDNSLTHEQIEGWRRMF 505
Query: 615 ITISKTCE--RLEITISELHIKIEELNRT 695
T SK E + E+T + I L +T
Sbjct: 506 TTDSKFAEAVKKEVTFGSGNTNIGSLRQT 534
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 29.5 bits (63), Expect = 0.71
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Frame = +3
Query: 300 DLSVQVIQLSERLEEAEGGAESQ---FEINRKRDTELLKLRKLLEDVHLESEETXH---- 458
DL Q+ +L + L++A A + +I + EL + + + ES+ +
Sbjct: 193 DLIKQITELQDMLDKARDQARKKSRTVDILEGKVNELTHQLNMADSKYNESKVANNSQNN 252
Query: 459 ---LLKKKNQEIVIDFQEQIDQLTKTKA---RAEKEKSKFQAEVYELLAQVENVTK--EK 614
LK +N I +FQ+ +L +T + +KE S Q LL + + TK E+
Sbjct: 253 QIKTLKAQNLNIHKNFQKIQSELIQTNSGLYSTKKELSALQVRYATLLRKFTDQTKKIEE 312
Query: 615 ITIS--------KTCERLEITISELHIKIEELNRTIVDITSHKQRLSPEN 740
++++ T RL + EL +LN I D+T K ++ N
Sbjct: 313 LSLAASRSSENENTIRRLALENHELKNSNNQLNNHIDDLTREKHLIALSN 362
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 29.1 bits (62), Expect = 0.94
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3
Query: 177 VNIEYSADLSALSRLEDKIRLIQDDLESERELRQRI--EREKADLSVQVIQLSERLEEAE 350
+N E + S LE+ R Q+D++SERE+ +++ E EK+D +V V L R+ +
Sbjct: 122 INDEEDKSPAKQSVLEE--RTSQEDVKSEREVAEKLANELEKSDKTVFVNNLPARVVTNK 179
Query: 351 G 353
G
Sbjct: 180 G 180
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 29.1 bits (62), Expect = 0.94
Identities = 38/175 (21%), Positives = 71/175 (40%), Gaps = 1/175 (0%)
Frame = +3
Query: 219 LEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTE 398
+ DK Q + +E+ ER+ ++Q+ L ++ E E R + E
Sbjct: 47 VSDKTIQFQKLQMTAKEIIDAFERDSTQRTLQIESLESKIGEQE----------RDLNNE 96
Query: 399 LLKLRKLLEDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSKFQAEVYE 578
L L E L +E LK +N + ++ +++ K + KSKF+
Sbjct: 97 KLASETLREKTQLLEKENG-ALKVENGYLYEKSRKLEEEMAHLKKKCNVYKSKFEESSLR 155
Query: 579 LLAQVENVTKEKITISKTCERLEITISELHIKIEELNRTIVD-ITSHKQRLSPEN 740
+ + TK K ++ R+E E++ KI+ N + D + Q LS ++
Sbjct: 156 CKSLYSSNTKLKDSMETMKRRMETETKEMN-KIKPKNDSESDRFKRNSQSLSQQS 209
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 29.1 bits (62), Expect = 0.94
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +3
Query: 204 SALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINR 383
S + + KI DDL+ + ++ ER+ L +++ ++ + + ES +R
Sbjct: 692 SEIESFDQKITACLDDLQKAQLSLKQFERDHIPLKDELVTITGETTDLQ---ESMHHKSR 748
Query: 384 KRDTELLKLRKLLEDVH-LESEETXHL--LKKKNQEIVIDFQEQIDQLTKTKARAEKEKS 554
+ +L+L L + + L+SE + + L K+ E + QI+ L+ KE++
Sbjct: 749 MLELVVLELHTLEQQANDLKSELSSEMDELDPKDVEALKSLSGQIENLSHEFDAIIKERA 808
Query: 555 KFQA 566
+A
Sbjct: 809 HIEA 812
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 28.7 bits (61), Expect = 1.2
Identities = 30/145 (20%), Positives = 61/145 (42%), Gaps = 7/145 (4%)
Frame = +3
Query: 357 AESQFEI-NRKRDTELLKLRKLLEDVHL-----ESEETXHLLKKKNQEIVIDFQEQIDQL 518
A +F++ N K D + +L E + L E E + L+ + + +EQ
Sbjct: 58 ASLEFQLENLKNDLKRKELEFEREQIELQRKLAEEHEQKNSLQLRLTLVEKQLEEQSTSY 117
Query: 519 TKTKARAEKEKSKFQAEVYELL-AQVENVTKEKITISKTCERLEITISELHIKIEELNRT 695
K EK Q +++ELL A+ + + + K I K + L E+ + + L
Sbjct: 118 QKEIEEVRNEKEATQVKIHELLDAKWKEIAELKTQIEKNDQALSEKNHEVMVSNQALQMK 177
Query: 696 IVDITSHKQRLSPENXELVXQVXDL 770
++T+ ++ + +L + +L
Sbjct: 178 DTNLTNLEKLFADSREQLETKCKEL 202
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 28.7 bits (61), Expect = 1.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 508 ICSWKSITISWFFFLSRWXV 449
+ WK +TI++F FLS W +
Sbjct: 2177 LAPWKMLTIAFFLFLSMWII 2196
>SPAC139.06 |hat1|SPAC23C4.01|histone acetyltransferase
Hat1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = +3
Query: 270 LRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRK 416
+++RI R+ D+ +Q + SER+E+ E+QF+ ++ +L KL++
Sbjct: 317 IKERIFRQNLDVLLQ-LDKSERIEKIHNAYENQFDEYKQIVKKLPKLKE 364
>SPAC6F6.12 |||autophagy associated protein
Atg24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 165 GTTDVNIEY----SADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSE 332
G+ D ++ Y +LS +R E K+R D +E+ R+ D V +
Sbjct: 31 GSRDTHVSYLIITKTNLSIFTRAECKVRRRFSDFVKLQEILSRMNE---DCVVPPLPAKH 87
Query: 333 RLEEAEGGAESQFEINRK 386
+LE +GG S INR+
Sbjct: 88 KLEYIKGGRFSDNFINRR 105
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/92 (22%), Positives = 40/92 (43%)
Frame = +3
Query: 189 YSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQ 368
+ +L LE+K++L + + + R+E E DL+ + + + R+ A +
Sbjct: 76 FDEELVKFHNLEEKLQLTETKCRNAESEKSRVENELEDLTSSLFEEANRM---VANARKE 132
Query: 369 FEINRKRDTELLKLRKLLEDVHLESEETXHLL 464
+ KR + +L+K L D T H L
Sbjct: 133 TVASEKR---VNQLKKQLVDAETLLSSTQHQL 161
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 234 RLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTEL-LKL 410
R QD+ ESE E R + + ++ V ++E +G SQ +R R T L +
Sbjct: 131 RRSQDEEESEEEHRPILRERTSRINYSVPLAFPPVDEMDGDPSSQVNQSRSRKTHSELAI 190
Query: 411 RKLL 422
KLL
Sbjct: 191 TKLL 194
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/98 (20%), Positives = 50/98 (51%)
Frame = +3
Query: 378 NRKRDTELLKLRKLLEDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSK 557
NRK + +L ++V+ E L+ K+N++++I+ Q + +++ + E+ K
Sbjct: 544 NRKTSFTDSHILRLQDEVNQLRNELD-LVNKRNEDLLIELQGKEEKIQYLETENEEVLQK 602
Query: 558 FQAEVYELLAQVENVTKEKITISKTCERLEITISELHI 671
++ EL + + +TK + +++ E+ +E +I
Sbjct: 603 YENLQEELSSTRKLLTKNEAAVAEQQSNEEMHSNEPNI 640
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 28.3 bits (60), Expect = 1.6
Identities = 23/122 (18%), Positives = 58/122 (47%)
Frame = +3
Query: 153 SSGGGTTDVNIEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSE 332
+S ++ + SAD S E +I + +S+ + + + + +L ++ L++
Sbjct: 182 ASSSNDSESELTDSADNMNESDSESEI----ESSDSDHDDGENSDSKLDNLRNYIVSLNQ 237
Query: 333 RLEEAEGGAESQFEINRKRDTELLKLRKLLEDVHLESEETXHLLKKKNQEIVIDFQEQID 512
+ ++ E AES + E + ++K+ D H ++E+ + L +++ ID + +D
Sbjct: 238 KRKKDEADAESVLSSDDNDSIEEISIKKVKYDPHETNKESEYNLIGSSEK-TIDITDLLD 296
Query: 513 QL 518
+
Sbjct: 297 SI 298
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 27.9 bits (59), Expect = 2.2
Identities = 28/128 (21%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Frame = +3
Query: 195 ADLSALSRLEDKIRLIQDDLESERELR----QRIEREKADLSV-QVIQLSERLEEAEGGA 359
A+L+A L+ K + L + E+ +RI REK + + + +L+E L +A+GG
Sbjct: 583 AELAAQRALKQKQESEAESLRVQEEINKRNAERIRREKEAIRINEAKKLAEEL-KAKGGL 641
Query: 360 ESQFEINRKRDTELLKLRKL--LEDVHLESEETXHLLKKKNQEIVIDFQEQIDQLTKTKA 533
E E D + L+ ++ +E + E ++ K+ + ++ + L + A
Sbjct: 642 EVNAEDLEHLDADKLRAMQIEQVEKQNKSMNERLRVIGKRIDHLERAYRREAIPLWEEDA 701
Query: 534 RAEKEKSK 557
+ + E +
Sbjct: 702 KQQAEHDR 709
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 498 QEQIDQLTKTKARAEKEKS-KFQAEVYELLAQVENVTKEKITISKTCERLEITISELHIK 674
Q ++DQ T T R++KE++ K + V+E L ++ + + + + EL
Sbjct: 200 QVKVDQATLTHYRSDKERAEKIELRVHESLKRISCIRSKVEELDQEITETARLQDELFKS 259
Query: 675 IEELNRTIVDI 707
EE + ++ I
Sbjct: 260 TEEYEQQMITI 270
>SPBC577.05c |rec27|mug41|meiotic recombination protein
Rec27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 134
Score = 27.5 bits (58), Expect = 2.9
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Frame = +3
Query: 441 SEETXHLLKK---KNQEIVIDFQEQIDQLTKTKARAEKEK-----SKFQAEVYEL----L 584
SE H+L++ KN E + +QI+ KT EK+ S+ Q ++ E
Sbjct: 24 SEIIEHVLEELNLKNIERRVKKYDQIESEYKTNIENEKKAFIKDVSQVQQKIKEFEIQKA 83
Query: 585 AQVENVTKEKITISKTCERLEITISELHIKIEELNRTIV 701
Q++ + +EK++I ++LEI I ++ E R +V
Sbjct: 84 NQIKQLNEEKLSIEARKQQLEIEIRNQLLQYAEKLRIVV 122
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 27.5 bits (58), Expect = 2.9
Identities = 24/104 (23%), Positives = 48/104 (46%)
Frame = +3
Query: 456 HLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSKFQAEVYELLAQVENVTKEKITISKTC 635
H+++ E+ ++ ++ D L + R +KEKSKF Y NV +++ +
Sbjct: 55 HIIQNLLNELD-NYVDRSDCLFHSVWRTDKEKSKFSGNYYPFSPSKMNVITIDLSLRSSS 113
Query: 636 ERLEITISELHIKIEELNRTIVDITSHKQRLSPENXELVXQVXD 767
E IS+L EE + +++ + H ++ + L +V D
Sbjct: 114 TADEKLISQLG---EEAHESLLKV--HIEKANKHLFSLFSRVED 152
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.5 bits (58), Expect = 2.9
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 276 QRIEREKADLSVQVIQLSERLEEAEGGA-ESQFEINRKRDTELLKLRKLLEDVHLESEET 452
++ ++E +D SV+ + + + E + Q EINRK++ E L+ E + ++E
Sbjct: 33 EKPQKELSDASVKSSYVDQEQQAYENWKKQEQEEINRKKEEE---LKSKFEKLRQKNERR 89
Query: 453 XHLLKKKNQEIVIDFQEQID 512
K E + + +QID
Sbjct: 90 RRTQGKTLAETLAEEDDQID 109
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +3
Query: 510 DQLTKTKARAEKEKSKFQAEVYELLAQVENVTKEKITISKTCERLEITISELHIKIEELN 689
D L K+ A K+ + +++ L +++ + EK+ K E+ + ++ +K+E L
Sbjct: 43 DSLQKSFLDALKQSATDSELLHKNLDEIKFLQNEKLNNEKLLEQEQNEANDYRLKVERLE 102
Query: 690 RTIVDITSHKQRLSPENXELVXQ 758
I D + Q ++ N +L Q
Sbjct: 103 HKISD---YVQEINSLNSQLQIQ 122
>SPBC216.01c ||SPBC713.13c|DNA damage response protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 836
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 354 GAESQFEINRKRDTE--LLKLRKLLEDVHLESEETXHLLKKKN-QEIVIDFQE 503
G + F + + D E LLK + + ED++ EET + ++ N ++ + FQE
Sbjct: 71 GPLAYFIVRSEADNETILLKTQLIAEDIYSRQEETLIVWQELNGTDLALSFQE 123
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/93 (20%), Positives = 36/93 (38%)
Frame = +3
Query: 492 DFQEQIDQLTKTKARAEKEKSKFQAEVYELLAQVENVTKEKITISKTCERLEITISELHI 671
+FQ Q D + E S+ +L + +T E+++ L+ +S
Sbjct: 246 NFQSQADLMQANINSKLDELSQKSTRAAQLYVDIMGITDERVSREPHYLELKGVLSSNEE 305
Query: 672 KIEELNRTIVDITSHKQRLSPENXELVXQVXDL 770
KIE +NR + + Q + + + DL
Sbjct: 306 KIESINRDLSSLFEDIQFFISQRTKRQKDIIDL 338
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 498 QEQIDQLTKTKARAEKEKSKFQAEVYELLAQVENVTKEKIT 620
+EQ +LTK + R E+E++K A L+ +E ++++T
Sbjct: 74 EEQPAKLTKEEKRVEREEAKRMASKV-LIKTIERTKRKRVT 113
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 26.6 bits (56), Expect = 5.0
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +3
Query: 243 QDDLESERELRQ--RIEREKADLSVQVIQLSERLEEA-EGGAESQFEINRKRDTELLKLR 413
QD + S +L Q R++ EKA + + +ER A E + E K++ +LL LR
Sbjct: 4 QDSIPSLEQLVQQKRVKEEKA-ARPKFLSKAERARLALERRQKEVEEAKAKQNDKLLDLR 62
Query: 414 KLLEDVHLESEE 449
K HLE+ E
Sbjct: 63 KRTFTNHLENNE 74
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 26.2 bits (55), Expect = 6.6
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +3
Query: 426 DVHLESEETXHLLKKKNQEI-VIDF--QEQIDQLTKTKARAEKEKSKFQAEVYELLAQVE 596
D H + E LK+ + +I +F EQI ++ K R S+ E E
Sbjct: 92 DPHDQPPERDVSLKESSNKINPSNFFDSEQITKINAVKKRFPALDSEMIIATLEKFNWRE 151
Query: 597 NVTKEKITISKTCERLEITISELHIKI--EELNRTIVDITSHKQR 725
N+T K+T K R TI++ K+ + + ++ VD + K++
Sbjct: 152 NITIHKLTFQKLLGRGNSTINKSAQKLNNQPIEKSSVDKENAKRK 196
>SPBC1604.07 |atp4||F0-ATPase subunit|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/69 (18%), Positives = 33/69 (47%)
Frame = +3
Query: 501 EQIDQLTKTKARAEKEKSKFQAEVYELLAQVENVTKEKITISKTCERLEITISELHIKIE 680
++++ +T+ KE ++ +AE++EL +V + K + E +++ E
Sbjct: 150 QEVESVTQALFHTSKETARMEAEIFELEQRVALAKEAKSVLDSWVHH------EANVRAE 203
Query: 681 ELNRTIVDI 707
+ R + D+
Sbjct: 204 QQERLVEDV 212
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 26.2 bits (55), Expect = 6.6
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 117 SAMAKTSKYTYRSSGGGTTDV--NIEYSADLSALSRLEDKIRLIQDDLESERELRQRIER 290
S+ +K + + G T + +I + + +A +LED ++ D S+REL +R +
Sbjct: 448 SSTLSVNKKQFNADDGSTLNSPNSIRETEEYAASPKLEDIADEVETDATSQRELLER-QI 506
Query: 291 EKADLS 308
+KA+ S
Sbjct: 507 QKAESS 512
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 26.2 bits (55), Expect = 6.6
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = +3
Query: 153 SSGGGTTDVNIEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKA---DLSVQVIQ 323
+S TD+ S L + +DK++ + LE L+ E EK+ +L V++
Sbjct: 403 ASSNANTDLRSRVDISESKLKKRDDKLKRVSSQLE---HLKHNYEEEKSMNENLLVRIQT 459
Query: 324 L-SERLEEAEGGAESQFEIN 380
L + +++ QF+IN
Sbjct: 460 LEKQNTTKSDQIVSMQFQIN 479
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 25.8 bits (54), Expect = 8.8
Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 11/198 (5%)
Frame = +3
Query: 168 TTDVNIEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEA 347
+ D N + S L L+ L LI+DD E + +R ++ V E+L A
Sbjct: 236 SVDFNNQTSYRLPNLTNLSS---LIRDDTIDENGNAKEHDRLPELNTIPVASTDEQLFNA 292
Query: 348 EGGAESQFEI--------NRKRDTELLKLRKLLEDVHLESEETXHLLKKKNQEIVIDFQE 503
E +FEI N K D KL L + + E L ++ ++E++ E
Sbjct: 293 HQLLEKKFEILKRERNECNAKIDELQDKLELLTDAYNREKRRARSLEERMSKEMLTKLGE 352
Query: 504 -QID--QLTKTKARAEKEKSKFQAEVYELLAQVENVTKEKITISKTCERLEITISELHIK 674
+D ++EK + + L Q E++ + + + +R E I L K
Sbjct: 353 SNVDDGMAASRYDTVKREKERLSEHLKSLQEQYEHI--QSVYKNVLLDR-ESYIMRLGNK 409
Query: 675 IEELNRTIVDITSHKQRL 728
I E N + + K++L
Sbjct: 410 ISENNELLNENRVLKEKL 427
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 25.8 bits (54), Expect = 8.8
Identities = 34/176 (19%), Positives = 78/176 (44%), Gaps = 10/176 (5%)
Frame = +3
Query: 186 EYSADLSALSRLEDKIRLI-QDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAE 362
+ A+L+A + +L Q E ER+ + ++A ++Q+ Q ++ E A+
Sbjct: 344 QQQAELAAQQAAAQQAQLAAQQAAEMERQRMAAQQHQQALEAIQMAQAEQQRIAQEQLAQ 403
Query: 363 SQFEIN-----RKRDTELLKLRKLLEDVHL---ESEETXHLLKKKNQEIVIDFQEQIDQL 518
QF++ + + +LL R LE ++ + + L+ + + ++ QEQI Q
Sbjct: 404 QQFQMQTQGQLAELEQQLLATRGQLEQSNVLLNQYDARVRTLENELSQAGVNLQEQIHQ- 462
Query: 519 TKTKARAEKEKSKFQAEVYELLAQV-ENVTKEKITISKTCERLEITISELHIKIEE 683
+ K + YE LA++ + +E + + +++++ S I++
Sbjct: 463 NDDLIESLKNQILTWKNKYEALAKLYTQLRQEHLDLLSKYKQIQLKASSAQEAIDK 518
>SPAC6F12.08c |||exocyst complex subunit Exo84|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 210 LSRLEDKIRLIQDDLESERELRQRIEREKADL 305
L LE+ R +DLE REL + E+AD+
Sbjct: 302 LQELENWSRKHDEDLEFSRELEYHTKSEQADM 333
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,654,199
Number of Sequences: 5004
Number of extensions: 43973
Number of successful extensions: 327
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 309
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 475330268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -