Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_P12
         (972 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0968 + 29785265-29785633                                         31   1.0  
04_04_0534 + 26071227-26071811                                         30   2.4  
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896...    30   2.4  
07_01_0498 + 3734498-3734976,3736176-3736800                           30   3.2  
07_01_0580 + 4316895-4317053,4317530-4318024,4318124-4319305           29   7.4  
03_02_0103 + 5640652-5641029,5641458-5641693,5642292-5642367,564...    29   7.4  
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094...    28   9.8  
03_06_0690 - 35571816-35572586                                         28   9.8  

>04_04_0968 + 29785265-29785633
          Length = 122

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +2

Query: 539 GSR-PETA--NRSHHAQAGDPANEPGAAAGGTLNGVAFRTTGD 658
           G+R P TA  NR HHA  G PA +P   A GT  G       D
Sbjct: 76  GTRVPLTAGGNRHHHAPVGGPAVDPAYPAAGTGTGTGTYAASD 118


>04_04_0534 + 26071227-26071811
          Length = 194

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 523 STSAVWLPTRDRQQIPSRPGRRPCQ*TRGCGWRNP 627
           + +  W  T   +    R GRRP +  R C WR P
Sbjct: 79  AATVAWRHTAGARLATRRRGRRPARRRRDCAWRRP 113


>01_01_1130 +
           8959909-8960396,8960588-8960638,8960736-8960827,
           8960964-8961054,8961877-8961937,8962172-8962216,
           8962318-8962391,8962565-8962637,8963288-8963345,
           8963398-8963468,8963801-8963837,8964040-8964128,
           8964207-8964263,8964366-8964449,8964529-8964627,
           8964765-8964869,8965145-8965216,8965308-8965497,
           8965810-8966207
          Length = 744

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +3

Query: 540 APDQRPPTDPITPRPETLPMNQGLRLAEP*TALPSGPRAT 659
           A D+ PP  P +P P   P      L  P ++ PSG RAT
Sbjct: 70  AVDRTPPPTPPSPPPPPPPPPTNGTLTPPPSSAPSGGRAT 109


>07_01_0498 + 3734498-3734976,3736176-3736800
          Length = 367

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 482 DVGSVSDYGVIGRVAQVIVDALPFLAVGGLARKV 381
           D    +D GV+  +A  +VD   FLA GG+ R V
Sbjct: 26  DEAPAADDGVVEEIAIPVVDLAAFLASGGIGRDV 59


>07_01_0580 + 4316895-4317053,4317530-4318024,4318124-4319305
          Length = 611

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +3

Query: 237 NMDTGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVP 362
           N++  D  +  + + TS++ P  L+P+  P+V   AP    P
Sbjct: 17  NVEASDDHAAFDAMATSSRRPPSLRPLRHPNVTSLAPVIFPP 58


>03_02_0103 +
           5640652-5641029,5641458-5641693,5642292-5642367,
           5642450-5642526,5642672-5642702,5642798-5642950,
           5643259-5643300,5643372-5643440,5643645-5643752
          Length = 389

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +2

Query: 548 PETANRSHHAQAGDPANEPGAAAGGTLNGVA 640
           P+ A  S    A  P+ EPGAA G    G A
Sbjct: 66  PDVAGPSREPDAAGPSREPGAAGGSREPGAA 96


>09_04_0070 +
           14308446-14308511,14308844-14309005,14309420-14309473,
           14310009-14310073,14310391-14310459,14310590-14310767,
           14311085-14311231,14311316-14311432,14311507-14311619,
           14311703-14311781,14311892-14312020
          Length = 392

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 195 KLLLIGFLAAACAQNMDTGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVP 362
           K+L   FL     Q   +       ++  ++  PPTQ  P    S A  AP+T VP
Sbjct: 63  KVLENSFLVIMLRQGKGSSSSAPATSKAPSNQAPPTQTVPAAPASQAPVAPATTVP 118


>03_06_0690 - 35571816-35572586
          Length = 256

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 521 HRRLLSGSRPETANRSHHAQAGDPANEPGAAA 616
           H +  S S P    R+H   A DP N   AAA
Sbjct: 78  HHKTSSSSHPRPPRRAHPEDALDPLNHSSAAA 109


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,252,697
Number of Sequences: 37544
Number of extensions: 466518
Number of successful extensions: 1635
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1633
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2823252340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)