Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P11
(1016 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 45 2e-05
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.004
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.005
SPBC18E5.06 |rps21||40S ribosomal protein S21|Schizosaccharomyce... 36 0.007
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.009
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.11
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.15
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.20
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.45
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 3.2
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 26 7.4
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 9.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 9.8
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 9.8
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 44.8 bits (101), Expect = 2e-05
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Frame = +2
Query: 776 PXXPXPPVHPXEL--PXXTPXKPPXXPP-PLXPPXXXXPKXXXPXXXPXXXRGXXPXXPP 946
P P PP EL P P +P PP P P P P + P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 947 PXAPPPXGXRXPXPPXAXPPP 1009
P AP P PP PPP
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPP 205
Score = 36.3 bits (80), Expect = 0.007
Identities = 25/88 (28%), Positives = 29/88 (32%)
Frame = +2
Query: 719 SXXSPSXXSAXXRT*XTAFPXXPXPPVHPXELPXXTPXKPPXXPPPLXPPXXXXPKXXXP 898
S +P + R +A P PP P P P K P P L PP P
Sbjct: 126 SAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPI-PSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 899 XXXPXXXRGXXPXXPPPXAPPPXGXRXP 982
P P PP PPP + P
Sbjct: 185 PSAPSLPSAVPPM--PPKVPPPPLSQAP 210
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/51 (29%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +2
Query: 863 PPXXXXPKXXXPXXXPXXXRGXXPXXPP--PXAPPPXGXRXPXPPXAXPPP 1009
PP P P P PP P + PP + P P + PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.9 bits (84), Expect = 0.002
Identities = 26/82 (31%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Frame = +2
Query: 776 PXXPXPPVHPXELPXXTPXKPPXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPPXA 955
P P P V +P + PP P P P P P G P PP A
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSV--GVPPVPPPSTA 1216
Query: 956 PP---PXGXRXPXP-PXAXPPP 1009
PP P P P P A PP
Sbjct: 1217 PPVPTPSAGLPPVPVPTAKAPP 1238
Score = 36.3 bits (80), Expect = 0.007
Identities = 25/83 (30%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Frame = +2
Query: 776 PXXPXPPVHPXELPXXTPXKPPXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPPXA 955
P P P V +P + PP P + P P P P G P PP A
Sbjct: 1140 PPVPKPSVAAPPVPAPS-GAPPVPKPSVAAPPVPAPSSGIPPV-PKPAAGVPPVPPPSEA 1197
Query: 956 PP----PXGXRXPXPPXAXPPPP 1012
PP G PP PP P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 33.1 bits (72), Expect = 0.064
Identities = 24/87 (27%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Frame = +2
Query: 767 TAFPXXPXPPVHPXELPXXTPXKPPXXPP----PLXPPXXXXPKXXXPXXXPXXXRGXXP 934
+ P P P V +P + PP P P+ P P P P + P
Sbjct: 1089 SGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPK---P 1145
Query: 935 XXPPPXAPPPXG-XRXPXPPXAXPPPP 1012
P P P G P P A PP P
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 30.7 bits (66), Expect = 0.34
Identities = 26/86 (30%), Positives = 28/86 (32%), Gaps = 7/86 (8%)
Frame = +2
Query: 776 PXXPXPPVHPX-ELPXXTPXKP------PXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXP 934
P P P P +P TP P P PPP+ P P P P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP-------P 1084
Query: 935 XXPPPXAPPPXGXRXPXPPXAXPPPP 1012
P PP P P A PP P
Sbjct: 1085 VPAPSGIPP-----VPKPSVAAPPVP 1105
Score = 27.9 bits (59), Expect = 2.4
Identities = 20/82 (24%), Positives = 21/82 (25%), Gaps = 1/82 (1%)
Frame = +2
Query: 770 AFPXXPXPPVHPXELPXXTPXKPPXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPP 949
A P PPV P PP+ P P P PP
Sbjct: 1005 AAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064
Query: 950 XAPPPXGXRXPXP-PXAXPPPP 1012
P P P P PP P
Sbjct: 1065 PVPAPSSEIPSIPAPSGAPPVP 1086
Score = 26.2 bits (55), Expect = 7.4
Identities = 23/85 (27%), Positives = 23/85 (27%), Gaps = 6/85 (7%)
Frame = +2
Query: 776 PXXPXPPVHPXELPXXTPXKPPXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXP---- 943
P PP P LP P PP P P P P P
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHP-PSAPLSKPVSTSPAAPLARVPPVPKLSS 1019
Query: 944 -PPXAPPPXGXRXPXP-PXAXPPPP 1012
P P P P P P PP P
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVP 1044
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.1 bits (82), Expect = 0.004
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = +2
Query: 851 PPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPPXAPPPXGXRXPXPPXAXPPPP 1012
PP PP P P P PPP PPP G PP PPPP
Sbjct: 732 PPPPPPAVIVPTPA-PAPIPVPPPAPIMGGPPPPPPPP-GVAGAGPPPPPPPPP 783
Score = 34.3 bits (75), Expect = 0.028
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Frame = +2
Query: 791 PPVHPXELPXXTPXKPPXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPPXAPPPXG 970
PP P + TP P PP P P P G P PPP A G
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGA--GPPPPPPPPPAVSAGG 789
Query: 971 XRXPXP-PXAXPPP 1009
R P P A P P
Sbjct: 790 SRYYAPAPQAEPEP 803
Score = 29.1 bits (62), Expect = 1.0
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 751 PTDLXYXXPPXPPXPCPPXRTPXXXPXKTPXXAPPPLXPPXP 876
PT P PP P P P PPP PP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Frame = +1
Query: 778 PXPPXPCPPXRTPXXXPXKTPXXAP----PPLXPPXP 876
P PP P TP P P AP PP PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +1
Query: 784 PPXPCPPXRTPXXXPXKTPXXAPPPLXPPXPXXXXXXXXXXPXGXXGA 927
PP P P P TP AP P+ PP P P G GA
Sbjct: 732 PPPPPPAVIVP------TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGA 773
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.005
Identities = 27/85 (31%), Positives = 28/85 (32%), Gaps = 4/85 (4%)
Frame = +2
Query: 770 AFPXXPXPPVHPXELPXXTPXKPPXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXP-P 946
A P P + P T P PP L P P P P P
Sbjct: 394 AIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSA 453
Query: 947 PXAPP-PXG--XRXPXPPXAXPPPP 1012
P APP P G P PP A PPP
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 32.3 bits (70), Expect = 0.11
Identities = 24/82 (29%), Positives = 25/82 (30%)
Frame = +2
Query: 767 TAFPXXPXPPVHPXELPXXTPXKPPXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPP 946
T+ P P PP P P PP PP P P P P
Sbjct: 412 TSTPPVPTPPSLP-------PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
Query: 947 PXAPPPXGXRXPXPPXAXPPPP 1012
A PP P PP A P P
Sbjct: 465 --AAPPLPPAAPAPPPAPAPAP 484
Score = 31.1 bits (67), Expect = 0.26
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Frame = +2
Query: 791 PPVHPXELPXXTPXKPPXXP-PPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPPXAPPPX 967
PP P LP P PP P P+ PP P P P APPP
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPP------------LPAGMPAAPPLPPAAPAPPPA 479
Query: 968 GXRXPXPPXA 997
P P A
Sbjct: 480 PAPAPAAPVA 489
Score = 30.7 bits (66), Expect = 0.34
Identities = 25/82 (30%), Positives = 26/82 (31%), Gaps = 8/82 (9%)
Frame = +2
Query: 791 PPVHPXELPXXTPXKPPXXP----PPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPPXAP 958
PP+ P PP P P L P P P P PP AP
Sbjct: 377 PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP 436
Query: 959 P--PXG--XRXPXPPXAXPPPP 1012
P P G P PP A PP
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPP 458
Score = 30.3 bits (65), Expect = 0.45
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +2
Query: 704 PPRXXSXXSPSXXSAXXRT*XTAFPXXPXPPVHPXELPXXTPXKPPXXPPPLXPPXXXXP 883
PP PS + A P P P+ P LP P PP P PP P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP-LPAGMPAAPPLPPAAPAPPPAPAP 482
Query: 884 KXXXP 898
P
Sbjct: 483 APAAP 487
Score = 29.1 bits (62), Expect = 1.0
Identities = 21/82 (25%), Positives = 25/82 (30%)
Frame = +2
Query: 767 TAFPXXPXPPVHPXELPXXTPXKPPXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPP 946
T+ P P P K P PPP PP + P P PP
Sbjct: 287 TSKPPLPPPSSRVSAAALAANKKRP--PPP--PPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Query: 947 PXAPPPXGXRXPXPPXAXPPPP 1012
P + P + PPPP
Sbjct: 343 PRSNAAGSIPLPPQGRSAPPPP 364
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/68 (25%), Positives = 19/68 (27%)
Frame = +2
Query: 785 PXPPVHPXELPXXTPXKPPXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPPXAPPP 964
P PP P P PP P+ P +G PPP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 965 XGXRXPXP 988
R P P
Sbjct: 371 STGRQPPP 378
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 775 PPXPPXPCPPXRTPXXXPXKTPXXAPPPLXPP 870
PP PP P R P P + APPP+ PP
Sbjct: 230 PPIPPS-IPSSRPPERVPSLSAP-APPPIPPP 259
Score = 27.5 bits (58), Expect = 3.2
Identities = 27/94 (28%), Positives = 30/94 (31%), Gaps = 12/94 (12%)
Frame = +2
Query: 767 TAFPXXPXPPVHPXELPXXTPXKPPXXPPPLXPPXXXXPK-XXXPXXXPXXXRGXXPXXP 943
++ P P PP P + PPP PP P P P P
Sbjct: 334 SSLPPPPPPPRSNAAGSIPLPPQGRSAPPP--PPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Query: 944 PPXAP-------PPXG--XRXPXPPXAXPP--PP 1012
PP P PP G R PP PP PP
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP 425
>SPBC18E5.06 |rps21||40S ribosomal protein S21|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 36.3 bits (80), Expect = 0.007
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +2
Query: 56 YXLSCGAIRRMGESDDCIVRLTKKDGIL 139
Y +S G +R GESDDCI RLT +DG+L
Sbjct: 53 YAIS-GFVRSKGESDDCINRLTTQDGLL 79
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 35.9 bits (79), Expect = 0.009
Identities = 27/83 (32%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Frame = -3
Query: 1011 GGGGXAXGGXGXRXPXGGGAXG--GGXXGXXPRXSXGXXXGXXXXGXXXXGGXRGG--GX 844
GGG GG P G G G GG G G G G GG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 843 XGGFXGVXXGSSXGWTGGXGXXG 775
GG G G G+ GG G G
Sbjct: 247 FGGGLGGFGGGPGGFGGGPGGHG 269
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.11
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +2
Query: 839 PXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPPXAPP-PXGXRXPXPPXAXPPP 1009
P PP+ P P+ P P PPP APP P G PP A PPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPP----PMSVPPPPSAPPMPAG-----PPSAPPPP 1734
Score = 31.1 bits (67), Expect = 0.26
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 751 PTDLXYXXPPXPPXPCPPXRTPXXXPXKTPXXAPPPL 861
P + PP PP PP + P P PPPL
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = +2
Query: 803 PXELPXXTPXKPPXX--PPPLXPPXXXXPKXXXPXXXP 910
P ++ TP PP PPP PP P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/34 (32%), Positives = 12/34 (35%)
Frame = +1
Query: 775 PPXPPXPCPPXRTPXXXPXKTPXXAPPPLXPPXP 876
P P PP + P PPP PP P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect = 0.15
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 932 PXXPPPXAPPPXGXRXPXPPXAXPPP 1009
P PP PPP G P P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 791 PPVHPXELPXXTPXKPPXXPPPLXPP 868
PP +P P +PP PPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 775 PPXPPXPCPPXRTPXXXPXKTPXXAPPP 858
PP P P PP P P P PPP
Sbjct: 5 PPGNPPPPPPP--PGFEPPSQPPPPPPP 30
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.20
Identities = 22/58 (37%), Positives = 22/58 (37%)
Frame = -3
Query: 1011 GGGGXAXGGXGXRXPXGGGAXGGGXXGXXPRXSXGXXXGXXXXGXXXXGGXRGGGXXG 838
GG G GG G GGA GGG G R G G G G RGG G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGA--RGGRGGRGGARG-GRGGSSGGRGGAKGG 70
Score = 29.1 bits (62), Expect = 1.0
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = -3
Query: 981 GXRXPXGGGAXGGGXXGXXPRXSXGXXXGXXXXGXXXXGGXRGGGXXGGFXGVXXGSSXG 802
G R GG G G G G G G RGG GG G GSS G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG--RGGARGGRGGSSGG 63
Query: 801 WTGGXG 784
G G
Sbjct: 64 RGGAKG 69
Score = 29.1 bits (62), Expect = 1.0
Identities = 23/67 (34%), Positives = 25/67 (37%)
Frame = -3
Query: 1011 GGGGXAXGGXGXRXPXGGGAXGGGXXGXXPRXSXGXXXGXXXXGXXXXGGXRGGGXXGGF 832
GG G + GG G G G GGG G G G G G RGG GG
Sbjct: 9 GGRGGSRGGRGG-FNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG--RGGS-SGGR 64
Query: 831 XGVXXGS 811
G G+
Sbjct: 65 GGAKGGA 71
Score = 26.6 bits (56), Expect = 5.6
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 1011 GGGGXAXGGXGXRXPXGGGAXGGGXXGXXPRXSXG 907
GG G A GG G GGA GG P G
Sbjct: 48 GGRGGARGGRGGSSGGRGGAKGGAKVIIEPHRHAG 82
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.45
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 791 PPVHPXELPXXTPXKPPXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPPXAPPPXG 970
PP + + P PP PPP PP G PPP A P
Sbjct: 224 PPTYTPKQADPLPAPPPP-PPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQP 282
Query: 971 XRXP 982
R P
Sbjct: 283 PRPP 286
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = +2
Query: 797 VHPXELPXXTPXKPPXXP-PPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPPXAPPPXGX 973
V P P TP + P PP PP P+ P R PPP
Sbjct: 219 VSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPP--- 275
Query: 974 RXPXPPXAXPPPP 1012
P P P PP
Sbjct: 276 --PATPSQPPRPP 286
Score = 26.6 bits (56), Expect = 5.6
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +2
Query: 836 PPXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPPXAPPPXGXRXPXPPXAXPPPP 1012
PP PPP P R P PP P + P A PPPP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTP-----KQADPLPAPPPPP 242
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.4
Identities = 24/71 (33%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = -3
Query: 981 GXRXPXGG--GAXGGGXXGXXPRXSXGXXXGXXXXGXXXXGGXRGGGXXGGFXGVXXGSS 808
G + P G G G G G G G G GG GGG GGF G G S
Sbjct: 123 GPKKPKGARNGPAGRGGRGGFRGGRGGSRGGF---GGNSRGGF-GGGSRGGFGGGSRGGS 178
Query: 807 XGWTGGXGXXG 775
G G G
Sbjct: 179 RGGFRGGSRGG 189
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +2
Query: 803 PXELPXXTPXKPPXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPPXAPPP 964
P + TP PP P P G P PPP PPP
Sbjct: 899 PTIITHPTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPP 952
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 44 FCKMYXLSCGAIRRMGESDDCIVRLTKK 127
F K Y SCGA +R+G D +V K+
Sbjct: 46 FIKYYLPSCGACKRLGPMWDNMVEKAKE 73
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 9.8
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +2
Query: 776 PXXPXPPVHPXELPXXTPXKPPXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPPXA 955
P P PPV P P P PP+ P P P P P P A
Sbjct: 587 PSVPQPPVAPV-----VPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEA--PSVPQPPA 639
Query: 956 PP 961
P
Sbjct: 640 AP 641
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +2
Query: 932 PXXPPPXAPPPXGXRXPXPPXAXPP--PP 1012
P PPP A P G P A PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 9.8
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 839 PXXPPPLXPPXXXXPKXXXPXXXPXXXRGXXPXXPPPXAPPPXGXRXPXP 988
P P PP P P P PP A PP G P P
Sbjct: 492 PLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPP-GMPAPFP 540
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,697,004
Number of Sequences: 5004
Number of extensions: 42465
Number of successful extensions: 343
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 529254290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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