Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P10
(968 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB8E5.06c |rpl302|rpl3-2, rpl3-b|60S ribosomal protein L3|Sch... 268 1e-72
SPAC17A5.03 |rpl301|rpl3-1, rpl3|60S ribosomal protein L3 |Schiz... 267 1e-72
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.011
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.18
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.18
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.32
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.56
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.75
SPCC794.03 |||amino acid permease, unknown 13|Schizosaccharomyce... 28 1.7
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 24 1.7
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 28 2.3
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 27 4.0
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 9.2
>SPAPB8E5.06c |rpl302|rpl3-2, rpl3-b|60S ribosomal protein
L3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 268 bits (656), Expect = 1e-72
Identities = 121/208 (58%), Positives = 155/208 (74%)
Frame = +2
Query: 95 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 274
F+ P HGS+GF P+KR+ R RGKVKAFPKDD SKPVHLTAF+GYKAGMTH+VR+ DRPGS
Sbjct: 6 FEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLDRPGS 65
Query: 275 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEXCRRRFYKNWYXX 454
K++K+EI+EAVTIIETPPMV VGVVGY+ETP GLR+L TVWAEH+SE +RRFYKNW+
Sbjct: 66 KMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKNWFKS 125
Query: 455 XXXXXXXXXXXWQDELGRKSIEKDFXXMIRHCSVVRVIAXTQMKLLQQRXKXAHIMEIQL 634
+ + +SI ++ + ++CSVVRV+A TQ++ K AH+MEIQ+
Sbjct: 126 KKKAFTKYAKKYAE--STQSINRELERIKKYCSVVRVLAHTQIRKTPLAQKKAHLMEIQV 183
Query: 635 NGGTIQDXXKWARXHLEKPIPVHSVFAQ 718
NGG++ D +WAR H EK + + S F Q
Sbjct: 184 NGGSVADKVEWAREHFEKTVDIKSTFEQ 211
>SPAC17A5.03 |rpl301|rpl3-1, rpl3|60S ribosomal protein L3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 267 bits (655), Expect = 1e-72
Identities = 120/208 (57%), Positives = 155/208 (74%)
Frame = +2
Query: 95 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 274
F+ P HGS+GF P+KR+ R RGKVKAFPKDD SKPVHLTAF+GYKAGMTH+VR+ DRPGS
Sbjct: 6 FEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLDRPGS 65
Query: 275 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEXCRRRFYKNWYXX 454
K++K+EI+EAVT+IETPPMV VGVVGY+ETP GLR+L TVWAEH+SE +RRFYKNW+
Sbjct: 66 KMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKNWFKS 125
Query: 455 XXXXXXXXXXXWQDELGRKSIEKDFXXMIRHCSVVRVIAXTQMKLLQQRXKXAHIMEIQL 634
+ + +SI ++ + ++CSVVRV+A TQ++ K AH+MEIQ+
Sbjct: 126 KKKAFTKYAKKYAE--STQSINRELERIKKYCSVVRVLAHTQIRKTPLAQKKAHLMEIQV 183
Query: 635 NGGTIQDXXKWARXHLEKPIPVHSVFAQ 718
NGG++ D +WAR H EK + + S F Q
Sbjct: 184 NGGSVADKVEWAREHFEKTVDIKSTFEQ 211
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.5 bits (78), Expect = 0.011
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = +2
Query: 809 PXPXXPASXLPAXFP-PXPXCPPXX---GPXPXPPPPG 910
P P PA +P P P P PP GP P PPPPG
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG 769
Score = 33.9 bits (74), Expect = 0.035
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +2
Query: 776 PSXPXXXPXXXPXPXXPASXLPAXFPPXPXCPPXXGPXPXPPPP 907
P+ P P P P + + PP P P G P PPPP
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.5 bits (68), Expect = 0.18
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = -3
Query: 966 PXGXGLXGXXXXVREXRFXPGGGGXGXGPXKGGQXGXGGXXAGSXEAGXXGXGXXXGXXX 787
P G G G GG G G G +GG G GG G G G G G
Sbjct: 204 PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG-GPGGFGGGLGGFGGGPGGFG 262
Query: 786 GXEG 775
G G
Sbjct: 263 GGPG 266
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.18
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +2
Query: 776 PSXPXXXPXXXPXPXXP--ASXLPAXFPPXPXCPPXXGPXPXPPP 904
PS P P P P A LPA P P PP P P P P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP-AAPAPPPAP 480
Score = 29.9 bits (64), Expect = 0.56
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2
Query: 773 SPSXPXXXPXXXPXPXXPASXLPAXFPPXPXCPPXXGPXPXPPP 904
+P+ P P P PA +PA PP P P P P P P
Sbjct: 443 APAAPPLPPSAPIAPPLPAG-MPAA-PPLPPAAPAPPPAPAPAP 484
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 776 PSXPXXXPXXXPXPXXPASXLPAXFPPXPXCPPXXGPXPXPPP 904
PS P P P A LP P P PP P PP
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLP---PSAPIAPPLPAGMPAAPP 468
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.7 bits (66), Expect = 0.32
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = -3
Query: 906 GGGGXGXGPXKGGQXGXGGXXAGSXEAGXXGXGXXXGXXXGXEG 775
GG G G GG+ G GG G+ G G G G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG 55
Score = 27.1 bits (57), Expect = 4.0
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = -3
Query: 954 GLXGXXXXVREXRFXPGGGGXGXGPXKGGQXGXGGXXAGSXEAGXXGXGXXXGXXXGXEG 775
G G R R GG G G +GG G G G G G G G G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGG---RGGARGGRGGRGGARGGRGGSSG 62
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.56
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 836 LPAXFPPXPXCPPXXGPXPXPPPP 907
LP PP P PP P PPPP
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPPP 27
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 839 PAXFPPXPXCPPXXGPXPXPPPPG 910
P PP P P P P PPPPG
Sbjct: 9 PPPPPPPPGFEPPSQPPP-PPPPG 31
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 827 ASXLPAXFPPXPXCPPXXGPXPXPPPP 907
AS P PP P P P PPPP
Sbjct: 2 ASLPPGNPPPPPPPPGFEPPSQPPPPP 28
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.75
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +2
Query: 809 PXPXXPASXLPAXFPPXPXCPP-XXGPXPXPPPP 907
P P P P PP P PP GP PPPP
Sbjct: 1705 PTPPPP----PMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 6.9
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = +2
Query: 731 TALVSPRQXIXTXXSPSXPXXXPXXXPXPXXPASXLPAXFPPXPXCPPXXGPXPXPPPPG 910
T V P+ S P P P P A +PA P P P P P PG
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPS-APPMPAGPPSAPPPPLPASSAPSVPNPG 1747
>SPCC794.03 |||amino acid permease, unknown 13|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 554
Score = 28.3 bits (60), Expect = 1.7
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -2
Query: 256 FSNHVGHTGLITDKSSQMNRFARVVFRERLDLTTMTTGPLFGIESH-RPMSGVLKIF 89
F N VG G+I D S + +R+VF D +G L ++SH +P + V IF
Sbjct: 344 FMNVVGILGMIFDTSLSIVASSRLVFAVARDGVLPFSGWLRKVDSHGQPTNAVTFIF 400
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/72 (23%), Positives = 23/72 (31%)
Frame = +2
Query: 746 PRQXIXTXXSPSXPXXXPXXXPXPXXPASXLPAXFPPXPXCPPXXGPXPXPPPPGXXRLS 925
P+ + P+ P P P +P+ PP P P P P P G +
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP--KPSVAAPPVPAPSGAPPVP 1162
Query: 926 LTXXXXPXNPFP 961
P P P
Sbjct: 1163 KPSVAAPPVPAP 1174
Score = 27.9 bits (59), Expect = 2.3
Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = +2
Query: 773 SPSXPXXXPXXXPXPXXPASXLPAXFPPX--PXCP-PXXGPXPXPPPPGXXRLSLTXXXX 943
+P P P P PA+ +P PP P P P G P PPP +
Sbjct: 1168 APPVPAPSSGIPPVPK-PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGL 1226
Query: 944 PXNPFP 961
P P P
Sbjct: 1227 PPVPVP 1232
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/57 (28%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = +2
Query: 743 SPRQXIXTXXSPSX--PXXXPXXXPXPXXPASXLPAXFPPXPXCPPXXGPXPXPPPP 907
+P I + +PS P P P P+ P P PP P PP P
Sbjct: 1068 APSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 26.2 bits (55), Expect = 6.9
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +2
Query: 773 SPSXPXXXPXXXPXPXXPASXLPAXFPPXPXCPPXXGPXPXPPPP 907
+P P P P P+S +P P PP P PP P
Sbjct: 1158 APPVPKPSVAAPPVPA-PSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 26.2 bits (55), Expect = 6.9
Identities = 15/59 (25%), Positives = 19/59 (32%)
Frame = +2
Query: 785 PXXXPXXXPXPXXPASXLPAXFPPXPXCPPXXGPXPXPPPPGXXRLSLTXXXXPXNPFP 961
P P P P++ LP P PP P P R S+ +P P
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 25.8 bits (54), Expect = 9.2
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +2
Query: 797 PXXXPXPXXPASXLPAXFPPXPXCPPXXGPXPXPPPPGXXRLSLTXXXXPXNPFPXG 967
P P P P+ PP P P P P P G + P P P G
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPK--PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG 1157
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.8 bits (49), Expect(2) = 1.7
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 809 PXPXXPASXLPAXFPPXPXCPP 874
P PA+ LP+ + P P PP
Sbjct: 174 PSAAAPATSLPSDYNPPPPPPP 195
Score = 22.6 bits (46), Expect(2) = 1.7
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 854 PXPXCPPXXGPXPXPPPP 907
P P P P PPPP
Sbjct: 224 PPTYTPKQADPLPAPPPP 241
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +2
Query: 53 ILVRDCLPACRTENFQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDP-SKPVHLTAFIGYK 229
IL + P C H + S +P + G K FP D+P S P+ + G
Sbjct: 284 ILPLELSPGCPFYKIWHIRNTSCQSWPSPLYVKFNGGDKLFPGDNPYSFPITSSVHPGED 343
Query: 230 AGMTHVVREPDRPGSKI 280
T ++ P++ +I
Sbjct: 344 VNFTVALKVPEKSNKEI 360
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 83 RTENFQHPAH--GSMGFYPKKRSRRHRGKVKAFPKDDPSKPV 202
++E QHP +M FY + + G FP++ KP+
Sbjct: 186 KSEQVQHPQAVLDAMAFYSQSKKYLEEGAKPPFPRESTEKPL 227
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 9.2
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 776 PSXPXXXPXXXPXPXXPASXLPAXFPPXPXCPPXXGPXPXPPP 904
P P P P LP PP P P P P PP
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGE-PPLPDEPVPEEPLPGEPP 140
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,398,606
Number of Sequences: 5004
Number of extensions: 66943
Number of successful extensions: 242
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 497299314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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