Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P08
(926 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 33 0.29
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.67
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.67
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.67
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.88
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.88
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.88
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.2
AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical ... 30 2.0
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 2.0
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z92829-4|CAD54131.1| 569|Caenorhabditis elegans Hypothetical pr... 29 6.2
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.2
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 755 IPXXPXPXNPXXTPXPLXXPXXPPXPPXXXXXXXPXPP 868
+P P P +P P P+ P PP P P PP
Sbjct: 89 LPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPP 126
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.67
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +2
Query: 767 PXPXNPXXTPXPLXXPXXPPXPPXXXXXXXPXPPXXXXXXXXPXXXPPXL 916
P P P P P PP PP P PP P PP +
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 792
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.67
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +2
Query: 767 PXPXNPXXTPXPLXXPXXPPXPPXXXXXXXPXPPXXXXXXXXPXXXPPXL 916
P P P P P PP PP P PP P PP +
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 792
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.67
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +2
Query: 767 PXPXNPXXTPXPLXXPXXPPXPPXXXXXXXPXPPXXXXXXXXPXXXPPXL 916
P P P P P PP PP P PP P PP +
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 375
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 782 PXXTPXPLXXPXXPPXPPXXXXXXXPXPPXXXXXXXXPXXXPP 910
P P P P PP PP P PP P PP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 767 PXPXNPXXTPXPLXXPXXPPXPP 835
P P P TP P P PP PP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPP 321
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.5 bits (68), Expect = 0.88
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +2
Query: 758 PXXPXPXNPXXTPXPLXXPXXPPXPPXXXXXXXPXPPXXXXXXXXPXXXPP 910
P P P +P P P P PP PP P PP PP
Sbjct: 226 PPSPGPVDPSDEPSP-SDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPP 275
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 782 PXXTPXPLXXPXXPPXPPXXXXXXXPXPPXXXXXXXXPXXXPP 910
P P P P PP PP P PP P PP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 767 PXPXNPXXTPXPLXXPXXPPXPP 835
P P P TP P P PP PP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPP 331
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Frame = +2
Query: 758 PXXPXPXNPXXTPXPLXXPXXPPXPP--XXXXXXXPXPPXXXXXXXXPXXXPP 910
P P P P P PL P P PP P PP P PP
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical
protein Y64G10A.1 protein.
Length = 302
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 110 CACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLSVRAWN 241
CA + A ++LNY RT L+ +NC P TT + + A N
Sbjct: 38 CATTCGACSNLNYTRTCLS-DGLKNCACVGEPTTTMLCNTIACN 80
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 758 PXXPXPXNPXXTPXPLXXPXXPPXPP 835
P P P P P P+ P PP PP
Sbjct: 552 PREPTPREPTPEPEPVREPTPPPPPP 577
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 767 PXPXNPXXTPXPLXXPXXPPXPPXXXXXXXPXPP 868
P P P P P PP PP P PP
Sbjct: 521 PPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPP 554
>Z92829-4|CAD54131.1| 569|Caenorhabditis elegans Hypothetical
protein F10A3.4 protein.
Length = 569
Score = 28.7 bits (61), Expect = 6.2
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = -3
Query: 345 ADPQLVAVLHGVPSLVNDQVVNYILDDGA-LAXALIFQALTDSTVVVAGEDAVVQFLLEV 169
ADP V + V SL VV YI+ G LA ++ A + VVV G FLL
Sbjct: 74 ADPDKVEI---VDSL---NVVRYIVHTGTVLANVPLWLAAPSAQVVVTGVSGNSSFLLNY 127
Query: 168 LVRSVRG*FNDARAGGEH 115
+S+ G + GEH
Sbjct: 128 RYQSLSGFKQVIKPTGEH 145
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 758 PXXPXPXNPXXTPXPLXXPXXPPXPP 835
P P P P TP + P PP PP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPP 521
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,927,703
Number of Sequences: 27780
Number of extensions: 308966
Number of successful extensions: 1345
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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