Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P07
(968 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 38 0.003
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.004
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.046
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.080
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.11
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.18
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 4.0
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.9
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 846 PPXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
PP PTP PP PP PP P P P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 35.5 bits (78), Expect = 0.011
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNX--PPLXPPXPXPKPXXXPXPXP 959
P PPP P P PP PP PP PP P P P P
Sbjct: 1705 PTPPPP-PMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 776 LPXXPPAXXVPPPPXPAXXXPXPP 847
+P PP+ PPPP PA P P
Sbjct: 1723 MPAGPPS--APPPPLPASSAPSVP 1744
Score = 25.8 bits (54), Expect = 9.2
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 3/35 (8%)
Frame = +2
Query: 755 PXXXXVXLPXXPPAXXVPP---PPXPAXXXPXPPP 850
P P PP PP PP PA PPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.1 bits (82), Expect = 0.004
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNXPP--LXPPXPXPKPXXXPXPXP 959
P PPP P P P + P PP PP P P P P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 30.3 bits (65), Expect = 0.43
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
P P P P P P + P P P PKP P P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 30.3 bits (65), Expect = 0.43
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
P P P P P P + P P P PKP P P
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 29.9 bits (64), Expect = 0.56
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
P P P P+ PP+ P+ PP P P P P P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVA--APPVPKPSVAVPPVPAP 1117
Score = 29.5 bits (63), Expect = 0.75
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 843 PPPXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
PP P TP P P PP P P P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Score = 29.5 bits (63), Expect = 0.75
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 843 PPPXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
P P P P P PP P P PKP P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 29.1 bits (62), Expect = 0.98
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 849 PXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
P P P+ PP+ P+ PP P P P P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAA--PPVPAPSSGIPPVPKP 1184
Score = 29.1 bits (62), Expect = 0.98
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNXPPLX--PPXPXPKPXXXPXPXP 959
P P P P P P P PP PP P P P P P
Sbjct: 1172 PAPSSGIP-PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 849 PXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
P P P+ PP+ P+ PP P P P P P
Sbjct: 1074 PSIPAPSGAPPVPAPSG---IPPVPKPSVAAPPVPKP 1107
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 849 PXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
P P P+ PP+ P+ PP P P P P P
Sbjct: 1208 PPVPPPSTAPPVPTPSAG--LPPVPVPTAKAPPVPAP 1242
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +3
Query: 837 PXPPPXF---PXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
P P P P P P + P P PP P P P P P
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPP--NXPPLXPPX---PXPKPXXXPXPXP 959
P PP P P+ P P PP+ P P PKP P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 779 PXXPPAXXVPPPPXPAXXXPXPPP 850
P PA VPP P P+ P P P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 776 LPXXPPAXXVPPPPXPAXXXPXPPP 850
+P PP PP P P+ P PP
Sbjct: 1188 VPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 779 PXXPPAXXVPPPPXPAXXXPXPPP 850
P P+ +PP P PA P PP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 779 PXXPPAXXVPPPPXPAXXXPXPPP 850
P P+ VPP P P+ P P P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 26.6 bits (56), Expect = 5.3
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 11/52 (21%)
Frame = +3
Query: 837 PXPPPXF---PXPTPX---PPLXPP--NXPPLXPP---XPXPKPXXXPXPXP 959
P P P P P P PP+ P PP+ PP P PKP P P
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 779 PXXPPAXXVPPPPXPAXXXPXPPP 850
P P+ VPP P P+ P P P
Sbjct: 1199 PVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +3
Query: 837 PXPPPXF--PXPTPXPPLXPPNXPPL-XPPXPXP 929
P PPP P PTP L P P PP P P
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 26.2 bits (55), Expect = 6.9
Identities = 23/94 (24%), Positives = 25/94 (26%), Gaps = 1/94 (1%)
Frame = +3
Query: 681 PXXPXYXFPPFLPXPESRXXXXSSLXPXPXXXXXXXXXXXXXXXXXXXXXXXPXPPPXFP 860
P P P +P P S S P P P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 861 XPTPXPPLXPPNXP-PLXPPXPXPKPXXXPXPXP 959
P P P + P P P P P P P P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAP-PVP 1124
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 770 VXLPXXPPAXXVPPPPXPAXXXPXPP 847
V +P PP PP P P+ P P
Sbjct: 1205 VGVPPVPPPSTAPPVPTPSAGLPPVP 1230
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.046
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 849 PXFPXPTPXPPLXPPNXPPLXPP-XPXPKPXXXPXP 953
P P P PP PP+ PP PP P P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Score = 33.1 bits (72), Expect = 0.060
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXP--PNXPPLXPPXPXPKPXXXPXP 953
P PP P PPL P PPL P P P P P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 32.7 bits (71), Expect = 0.080
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +3
Query: 864 PTPXPPLXPPNXPPLXPPXPXPK-PXXXPXPXP 959
P P PP PP+ PP PP P P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 31.9 bits (69), Expect = 0.14
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = +3
Query: 837 PXPPPXFPXPTPX-PPLXPPNXP---PLXPPXPXPKPXXXPXP 953
P PP P P PP PP+ P P PP P P P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 31.9 bits (69), Expect = 0.14
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 9/50 (18%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNXP---------PLXPPXPXPKPXXXPXPXP 959
P PP P P P PP+ P P PP P P P P P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 29.5 bits (63), Expect = 0.75
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +3
Query: 837 PXPPPXFPXPTPXP-PLXPPNXPPLXP--PXPXPKPXXXPXPXP 959
P PP P P P+ P PPL P P P P P P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNXPPLXP---PXPXPKPXXXPXPXP 959
P P P P PP PP+ PP P P P P P P
Sbjct: 416 PVPTPP-SLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 25.8 bits (54), Expect = 9.2
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
P PPP PL P PP P P P P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 25.8 bits (54), Expect = 9.2
Identities = 12/41 (29%), Positives = 14/41 (34%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
P PP P P PP P+ PP + P P
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.7 bits (71), Expect = 0.080
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +3
Query: 846 PPXFPXP-TPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
PP P P TP L PP P P P P P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP-PIP 161
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXP 947
P P P P+ PP+ PP P P P P
Sbjct: 152 PSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +3
Query: 843 PPPXFPXPTPX--PPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
P P P P+P PP+ P PP+ P P P P
Sbjct: 145 PRPSIPPPSPASAPPI-PSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 843 PPPXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
PP P P P P PP P P P P P
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 843 PPPXFPXPTPXPPLXPPNXPPLXPPXPXPKP 935
P P P PP P P + PP P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAP 158
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +3
Query: 843 PPPXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXP 953
PP P PP P + PP+ P P P P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPI-PSKAPPIPSSLPPP 174
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 843 PPPXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
PPP P P PP L PP P P P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
P P P P+ PP P P PP P P P
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.11
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +3
Query: 837 PXPPPXF--PXPTPXPPLXPPNXPPLXPPXPXPKP 935
P PPP P P P P PP P + P P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 32.3 bits (70), Expect = 0.11
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNXPPLXPPXPXPKP 935
P PPP P PP PP PP P P P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.32
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 755 PXXXXVXLPXXPPAXXVPPPPXPAXXXPXPPP 850
P V +P PA PPP P P PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 30.3 bits (65), Expect = 0.43
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNXPPLXPPXPXPKPXXXPXPXP 959
P P P P P P P + P PP P P P P P
Sbjct: 744 PAPAP-IPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 806 PPPPXPAXXXPXPPPXFSXXXXXXXXXXXEHXXXXXXXXRSKTPXXPPPXPP 961
PPPP PA P P P P PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 25.8 bits (54), Expect = 9.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 779 PXXPPAXXVPPPPXPAXXXPXPPP 850
P PP + P P PA P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPI-PVPPP 754
Score = 25.8 bits (54), Expect = 9.2
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 8/40 (20%)
Frame = +2
Query: 755 PXXXXVXLPXXPPAXXV----PPPPXP----AXXXPXPPP 850
P +P PPA + PPPP P A P PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +3
Query: 846 PPXFPXPTPXPP-LXPPNXPPLXPP 917
PP P P P PP PP+ PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 29.1 bits (62), Expect = 0.98
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 888 PPNXPPLXPPXPXPKPXXXPXPXP 959
PP PP PP P +P P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 788 PPAXXVPPPPXPAXXXPXPPP 850
PP PPPP P P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPP 25
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPP 893
P PPP F P+ PP PP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = +3
Query: 858 PXPTPXPPLXPPN-XPPLXPPXPXP 929
P P PP PP PP PP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 843 PPPXFPXPTPXPPLXPPNXPP 905
PPP P P PP PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPN--XPPLXPP 917
P PPP P PP P PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 6.9
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +3
Query: 837 PXPPPXFPXPTPXPPLXPPNXPPLXP-PXPX-PKPXXXPXP 953
P PP P P PL P PPL P P P P P P
Sbjct: 104 PREPPLPNEPVPEEPL--PGEPPLPDEPVPEEPLPGEPPLP 142
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,598,884
Number of Sequences: 5004
Number of extensions: 44525
Number of successful extensions: 405
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 497299314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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