Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_P06
         (962 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084199-1|AAL89937.1|  826|Drosophila melanogaster SD01613p pro...    96   6e-20
AE014296-2879|AAN11704.1|  697|Drosophila melanogaster CG6512-PB...    96   6e-20
AE014296-2878|AAF49365.2|  826|Drosophila melanogaster CG6512-PA...    96   6e-20

>AY084199-1|AAL89937.1|  826|Drosophila melanogaster SD01613p
           protein.
          Length = 826

 Score = 96.3 bits (229), Expect = 6e-20
 Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
 Frame = +3

Query: 573 SVAYFELRYREISWRDFVNLYLNKGVVEXLXVINXKWVRVQLQGXALXGK-VIWFALGSV 749
           S A+FE+ Y+EISW++FVN YL+KGVVE L V+N KWVRV+LQ  +  G  V+WF +GSV
Sbjct: 177 SFAFFEMGYKEISWKEFVNSYLSKGVVEKLEVVNKKWVRVRLQQNSNSGSGVLWFNIGSV 236

Query: 750 DSFERNLXNAQ 782
           DSFERNL  AQ
Sbjct: 237 DSFERNLEAAQ 247



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
 Frame = +2

Query: 260 PALDSVLRQWYEFCKKPPKGFEKYFQPG---SGQKDAKTQEK 376
           P L  V++Q    CKKPPKGFEKYF+ G   SGQ      +K
Sbjct: 50  PLLRYVVKQIQLLCKKPPKGFEKYFEAGGKSSGQPKGSVGDK 91



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 19/28 (67%), Positives = 21/28 (75%)
 Frame = +1

Query: 808 NFVPVIYKXEXXAAXLTGMLPXXLIXGF 891
           NFVPVIY+ E  AA LTG+LP  LI GF
Sbjct: 256 NFVPVIYRNEVEAASLTGLLPTLLIIGF 283



 Score = 29.1 bits (62), Expect = 9.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 512 GQDKEKWMMFGAIGIVTLLAFSCVF 586
           G D+E+W++ GAIG V L+     F
Sbjct: 157 GGDRERWILLGAIGAVVLVGSFAFF 181


>AE014296-2879|AAN11704.1|  697|Drosophila melanogaster CG6512-PB,
           isoform B protein.
          Length = 697

 Score = 96.3 bits (229), Expect = 6e-20
 Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
 Frame = +3

Query: 573 SVAYFELRYREISWRDFVNLYLNKGVVEXLXVINXKWVRVQLQGXALXGK-VIWFALGSV 749
           S A+FE+ Y+EISW++FVN YL+KGVVE L V+N KWVRV+LQ  +  G  V+WF +GSV
Sbjct: 48  SFAFFEMGYKEISWKEFVNSYLSKGVVEKLEVVNKKWVRVRLQQNSNSGSGVLWFNIGSV 107

Query: 750 DSFERNLXNAQ 782
           DSFERNL  AQ
Sbjct: 108 DSFERNLEAAQ 118



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 19/28 (67%), Positives = 21/28 (75%)
 Frame = +1

Query: 808 NFVPVIYKXEXXAAXLTGMLPXXLIXGF 891
           NFVPVIY+ E  AA LTG+LP  LI GF
Sbjct: 127 NFVPVIYRNEVEAASLTGLLPTLLIIGF 154



 Score = 29.1 bits (62), Expect = 9.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 512 GQDKEKWMMFGAIGIVTLLAFSCVF 586
           G D+E+W++ GAIG V L+     F
Sbjct: 28  GGDRERWILLGAIGAVVLVGSFAFF 52


>AE014296-2878|AAF49365.2|  826|Drosophila melanogaster CG6512-PA,
           isoform A protein.
          Length = 826

 Score = 96.3 bits (229), Expect = 6e-20
 Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
 Frame = +3

Query: 573 SVAYFELRYREISWRDFVNLYLNKGVVEXLXVINXKWVRVQLQGXALXGK-VIWFALGSV 749
           S A+FE+ Y+EISW++FVN YL+KGVVE L V+N KWVRV+LQ  +  G  V+WF +GSV
Sbjct: 177 SFAFFEMGYKEISWKEFVNSYLSKGVVEKLEVVNKKWVRVRLQQNSNSGSGVLWFNIGSV 236

Query: 750 DSFERNLXNAQ 782
           DSFERNL  AQ
Sbjct: 237 DSFERNLEAAQ 247



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
 Frame = +2

Query: 260 PALDSVLRQWYEFCKKPPKGFEKYFQPG---SGQKDAKTQEK 376
           P L  V++Q    CKKPPKGFEKYF+ G   SGQ      +K
Sbjct: 50  PLLRYVVKQIQLLCKKPPKGFEKYFEAGGKSSGQPKGSVGDK 91



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 19/28 (67%), Positives = 21/28 (75%)
 Frame = +1

Query: 808 NFVPVIYKXEXXAAXLTGMLPXXLIXGF 891
           NFVPVIY+ E  AA LTG+LP  LI GF
Sbjct: 256 NFVPVIYRNEVEAASLTGLLPTLLIIGF 283



 Score = 29.1 bits (62), Expect = 9.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 512 GQDKEKWMMFGAIGIVTLLAFSCVF 586
           G D+E+W++ GAIG V L+     F
Sbjct: 157 GGDRERWILLGAIGAVVLVGSFAFF 181


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,789,173
Number of Sequences: 53049
Number of extensions: 551505
Number of successful extensions: 1059
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4812612705
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)