Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_P05
         (965 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    25   0.67 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   8.2  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 25.4 bits (53), Expect = 0.67
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 507 LEYRLLSFSSLQWVSLTSNLQQACLRQLDRLGGKNIL 397
           LE   LSF  L++  L  NL    L Q+  L   N+L
Sbjct: 433 LEINGLSFQGLEYTLLHLNLDNVSLSQVPALSTPNLL 469


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -1

Query: 359 IFELIWNLMTSVCAAADIHSSWY 291
           +F ++WN   +  A+ D  + WY
Sbjct: 284 LFTILWNCQNTRVASEDFKAIWY 306


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 350 AQRYSYKCESEVLPHGRIFFPP 415
           A+R +Y CE  +  HG+  + P
Sbjct: 59  AKRAAYDCEGVIRHHGQWNYSP 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,708
Number of Sequences: 336
Number of extensions: 3883
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27306312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)