Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_P05
         (965 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0678 + 27207340-27207447,27207555-27207668,27209111-272093...    47   3e-05
02_05_0144 + 26258841-26258948,26259099-26259212,26259335-262595...    47   3e-05
03_06_0282 - 32824950-32825135,32825247-32825505,32825651-328259...    46   6e-05
01_05_0337 + 21115388-21115961,21116471-21116597,21116683-211168...    36   0.064
05_02_0037 + 5883285-5884292                                           29   7.3  

>04_04_0678 +
           27207340-27207447,27207555-27207668,27209111-27209332,
           27209407-27209481,27209569-27209685,27210145-27210395,
           27210686-27210761,27210862-27210948,27211037-27211222
          Length = 411

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 20/54 (37%), Positives = 31/54 (57%)
 Frame = +3

Query: 534 LEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVTRDXVKALSALMT 695
           ++++  + +D G     +G+R QH   R P  GGIR+  +V  D V AL+ LMT
Sbjct: 35  IKVECTIPKDDGTLASFIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMT 88



 Score = 33.1 bits (72), Expect = 0.34
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 697 FKCACVXVPFGGATAGIRSIPKNXPSHDLEKITRRF 804
           +K A   +P+GGA  GI   P    + +LE++TR F
Sbjct: 89  WKTAVAAIPYGGAKGGIGCAPGELSTSELERLTRVF 124


>02_05_0144 +
           26258841-26258948,26259099-26259212,26259335-26259556,
           26259660-26259734,26259827-26259943,26260046-26260296,
           26260833-26260908,26261045-26261131,26261216-26261401
          Length = 411

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 20/54 (37%), Positives = 31/54 (57%)
 Frame = +3

Query: 534 LEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVTRDXVKALSALMT 695
           ++++  + +D G     +G+R QH   R P  GGIR+  +V  D V AL+ LMT
Sbjct: 35  IKVECTIPKDDGTLATFVGFRVQHDNSRGPMKGGIRYHPEVDPDEVNALAQLMT 88



 Score = 32.7 bits (71), Expect = 0.45
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 697 FKCACVXVPFGGATAGIRSIPKNXPSHDLEKITRRF 804
           +K A   VP+GGA  GI   P      +LE++TR F
Sbjct: 89  WKTAVAAVPYGGAKGGIGCTPGELSRSELERLTRVF 124


>03_06_0282 -
           32824950-32825135,32825247-32825505,32825651-32825901,
           32826309-32826425,32826613-32826687,32826788-32827009,
           32827396-32827509,32827694-32827801
          Length = 443

 Score = 45.6 bits (103), Expect = 6e-05
 Identities = 20/54 (37%), Positives = 31/54 (57%)
 Frame = +3

Query: 534 LEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVTRDXVKALSALMT 695
           ++++  + +D G     +G+R QH   R P  GGIR+  +V  D V AL+ LMT
Sbjct: 35  IKVECTIPKDDGTLASYVGFRVQHDNARGPMKGGIRYHHEVDPDEVNALAQLMT 88



 Score = 31.9 bits (69), Expect = 0.79
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 697 FKCACVXVPFGGATAGIRSIPKNXPSHDLEKITRRF 804
           +K A   +P+GGA  GI   P +    +LE++TR F
Sbjct: 89  WKTAVANIPYGGAKGGIGCSPGDLSISELERLTRVF 124


>01_05_0337 +
           21115388-21115961,21116471-21116597,21116683-21116884,
           21117460-21117546,21117622-21117681,21117800-21117886,
           21118451-21118522,21118675-21118730,21118812-21118897,
           21119427-21119517,21119593-21119750,21119827-21119918,
           21120110-21120190,21120282-21120479
          Length = 656

 Score = 35.5 bits (78), Expect = 0.064
 Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
 Frame = +3

Query: 447 EDLKSRTPIEEKKKXVAGIL-KLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTP 623
           E + S  P+  K      IL +L+EP +     + P   D G+  +  G+R Q S    P
Sbjct: 220 EVVHSLEPVLVKNSQHVQILERLLEP-ERCFIFRVPWVDDRGEAHVNRGFRVQFSQALGP 278

Query: 624 TXGGIRFSTDVTRDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSE 773
             GG+RF   +T    K L+   TL+                 +PK  SE
Sbjct: 279 CRGGLRFHPSMTLSVAKFLAFEQTLKNALSQYKLGGAAGGSDFDPKGKSE 328


>05_02_0037 + 5883285-5884292
          Length = 335

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
 Frame = +3

Query: 756 PKEXSEP*P-GKDHSSFPPEXAQXG--SLGLAWXSPPLTWVPRTXTVXDXXXFC 908
           P E + P   GK+ +  P   AQ G       W SPP  W PR         FC
Sbjct: 274 PTEAAAPATEGKEAAKSPDAAAQGGWCLFRCCWPSPPSVWWPRCGCGGGCGVFC 327


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,732,631
Number of Sequences: 37544
Number of extensions: 462574
Number of successful extensions: 925
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)