Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_P05
         (965 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_42530| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=0)            104   1e-22
SB_25509| Best HMM Match : PWP2 (HMM E-Value=4.4)                      37   0.028
SB_39930| Best HMM Match : Keratin_B2 (HMM E-Value=0.25)               34   0.20 
SB_52096| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.20 
SB_14929| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=6.4e-08)       34   0.20 
SB_47331| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.4  
SB_43845| Best HMM Match : ELFV_dehydrog (HMM E-Value=0)               31   1.4  
SB_29491| Best HMM Match : ELFV_dehydrog (HMM E-Value=0)               31   1.4  
SB_24841| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.3  
SB_39672| Best HMM Match : Peptidase_M20 (HMM E-Value=9.9e-09)         28   9.9  

>SB_42530| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=0)
          Length = 520

 Score =  104 bits (249), Expect = 1e-22
 Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
 Frame = +3

Query: 360 IPTSANPKFFHMVEYFFHRACQVVEDKLVE--DLKSRTP--IEEKKKXVAGILKLMEPCD 527
           + +   P F  M   FF +A   VE +L+   D   + P   E+KK  + GIL +M+PC 
Sbjct: 38  VESDTEPSFTEMCAGFFDQARTYVEHRLLTRPDPPGKIPEKFEDKKHRIKGILDVMKPCQ 97

Query: 528 HILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVTRDXVKALSALMTLQVR 707
            +L + FP++ D+G+Y ++ GYRAQHS HR+P  GGIR+S DV  D V+AL+ LMT +  
Sbjct: 98  DVLSVVFPIKLDNGEYKLVQGYRAQHSHHRSPCKGGIRYSEDVDIDEVQALATLMTFKCA 157

Query: 708 XXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
                        +I+P + S     K    F  E A+   +G
Sbjct: 158 VVDVPFGGAKGGIKIDPSQHSVTELEKITRRFTVELAKKHFIG 200


>SB_25509| Best HMM Match : PWP2 (HMM E-Value=4.4)
          Length = 582

 Score = 36.7 bits (81), Expect = 0.028
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
 Frame = +3

Query: 321 TYASHEIPDKLKDIPTSANPKFFHMVEYFFHR--ACQVVEDKLVEDLKSRTPIEEKKKXV 494
           TY+  E+ D L++  +S     FH+  +  HR     +++ + V+D K +TP  E KK  
Sbjct: 334 TYSQSELMD-LRNNSSSLTD--FHI--FCLHRWLPANLLKPEAVKDAKKQTPDLEFKKWT 388

Query: 495 AGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRT 620
            GIL        I E+  PL+R+  +      Y+AQ   H T
Sbjct: 389 KGILDHAGTVSAISEVIEPLKRNLTELFKAQDYQAQPLDHLT 430


>SB_39930| Best HMM Match : Keratin_B2 (HMM E-Value=0.25)
          Length = 312

 Score = 33.9 bits (74), Expect = 0.20
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 252 SVQNEALNTMFRIIPAGVNVCCRTYASHEIPDKLKDIPTSA 374
           +V  +A+NT   ++   +N CCRT  +  I    K +PT A
Sbjct: 251 TVPTKAINTCKTVLTKAINTCCRTVPTKAINTCCKTVPTKA 291


>SB_52096| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 997

 Score = 33.9 bits (74), Expect = 0.20
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +3

Query: 507 KLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVTRDXVKAL 680
           +++EP + +L  + P   D G+  +  GYR + ++   P  GG+RF   V    +K L
Sbjct: 379 RIVEP-ERVLSFRVPWLDDKGEVQVNRGYRVEFNSSIGPYKGGLRFHPSVNLGILKFL 435


>SB_14929| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=6.4e-08)
          Length = 131

 Score = 33.9 bits (74), Expect = 0.20
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +3

Query: 507 KLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVTRDXVKAL 680
           +++EP + +L  + P   D G+  +  GYR + ++   P  GG+RF   V    +K L
Sbjct: 71  RIVEP-ERVLSFRVPWLDDKGEVQVNRGYRVEFNSSIGPYKGGLRFHPSVNLGILKFL 127


>SB_47331| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 455

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -1

Query: 422 TGSVEKIFYHVEELRIRTCRNIFELIWNLMTSVCAAADIHSSWYDSEHCIEGF 264
           TG+V   +YH  +L I +  NI    W     VC   D   ++Y S++ I+ F
Sbjct: 203 TGAVYTDYYHDSDLTIGSVLNI----WGRKFQVCDCDDFTKAYYKSKYGIDSF 251


>SB_43845| Best HMM Match : ELFV_dehydrog (HMM E-Value=0)
          Length = 448

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +3

Query: 495 AGIL-KLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVTRDXV 671
           A IL +++EP + ++  + P R DS +  +  G+R + ++   P  GG+RF   V    +
Sbjct: 47  ANILDRIVEP-ERVVIFRVPWRDDSNNIRVNRGFRVEFNSTIGPYKGGLRFHPTVNLGIL 105

Query: 672 KAL 680
           K L
Sbjct: 106 KFL 108


>SB_29491| Best HMM Match : ELFV_dehydrog (HMM E-Value=0)
          Length = 486

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +3

Query: 495 AGIL-KLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVTRDXV 671
           A IL +++EP + ++  + P R DS +  +  G+R + ++   P  GG+RF   V    +
Sbjct: 85  ANILDRIVEP-ERVVIFRVPWRDDSNNIRVNRGFRVEFNSTIGPYKGGLRFHPTVNLGIL 143

Query: 672 KAL 680
           K L
Sbjct: 144 KFL 146


>SB_24841| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 579

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = +2

Query: 353 QRYSYKCESEVLPHGRIFFPPSLSSC 430
           QR  YK  SE   HGR  FP SL  C
Sbjct: 163 QRVGYKVSSEAHIHGRQSFPLSLDHC 188


>SB_39672| Best HMM Match : Peptidase_M20 (HMM E-Value=9.9e-09)
          Length = 702

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 792 HSSFPPEXAQXGSLGLAWXSPPLTWVPRTXT 884
           H+S PP+ +  G L  A  SPP   V  T T
Sbjct: 599 HASMPPKESSIGILSKAIASPPFPLVTHTTT 629


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,212,793
Number of Sequences: 59808
Number of extensions: 499466
Number of successful extensions: 948
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2848211039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)