Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P05
(965 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X66300-1|CAA46994.2| 558|Homo sapiens glutamate dehydrogenase (... 152 2e-36
X07769-1|CAA30598.1| 558|Homo sapiens glutamate dehydrogenase p... 152 2e-36
X07674-1|CAA30521.1| 558|Homo sapiens GDH protein. 152 2e-36
M37154-1|AAA52525.1| 558|Homo sapiens GLUD1 protein. 152 2e-36
M20867-1|AAA52526.1| 558|Homo sapiens GLUD1 protein. 152 2e-36
J03248-1|AAA52523.1| 558|Homo sapiens GLUD1 protein. 152 2e-36
BC112946-1|AAI12947.1| 558|Homo sapiens glutamate dehydrogenase... 152 2e-36
BC040132-1|AAH40132.1| 558|Homo sapiens glutamate dehydrogenase... 152 2e-36
AL136982-5|CAI17120.1| 558|Homo sapiens glutamate dehydrogenase... 152 2e-36
AK222818-1|BAD96538.1| 558|Homo sapiens glutamate dehydrogenase... 152 2e-36
X66310-1|CAA46995.1| 558|Homo sapiens glutamate dehydrogenase (... 149 1e-35
U08997-1|AAA20969.1| 558|Homo sapiens glutamate dehydrogenase p... 149 1e-35
BC050732-1|AAH50732.1| 558|Homo sapiens glutamate dehydrogenase... 149 1e-35
AC006144-1|AAD05030.1| 558|Homo sapiens glutamate dehydrogenase... 149 1e-35
AB209406-1|BAD92643.1| 299|Homo sapiens glutamate dehydrogenase... 56 1e-07
BC110371-1|AAI10372.1| 1506|Homo sapiens VPRBP protein protein. 34 0.68
AF061935-1|AAG27134.1| 1401|Homo sapiens HIV-1 Vpr-binding prote... 34 0.68
AB018343-1|BAA34520.2| 1521|Homo sapiens KIAA0800 protein protein. 34 0.68
>X66300-1|CAA46994.2| 558|Homo sapiens glutamate dehydrogenase
(NAD(P)+) protein.
Length = 558
Score = 152 bits (368), Expect = 2e-36
Identities = 78/179 (43%), Positives = 108/179 (60%)
Frame = +3
Query: 300 GVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEE 479
G+ + R + S + D+ D P FF MVE FF R +VEDKLVEDL++R E+
Sbjct: 44 GLALAARRHYSEAVADREDD------PNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQ 97
Query: 480 KKKXVAGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVT 659
K+ V GIL++++PC+H+L + FP+RRD G + +I GYRAQHS HRTP GGIR+STDV+
Sbjct: 98 KRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVS 157
Query: 660 RDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
D VKAL++LMT + +INPK ++ K F E A+ G +G
Sbjct: 158 VDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIG 216
>X07769-1|CAA30598.1| 558|Homo sapiens glutamate dehydrogenase
protein.
Length = 558
Score = 152 bits (368), Expect = 2e-36
Identities = 78/179 (43%), Positives = 108/179 (60%)
Frame = +3
Query: 300 GVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEE 479
G+ + R + S + D+ D P FF MVE FF R +VEDKLVEDL++R E+
Sbjct: 44 GLALAARRHYSEAVADREDD------PNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQ 97
Query: 480 KKKXVAGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVT 659
K+ V GIL++++PC+H+L + FP+RRD G + +I GYRAQHS HRTP GGIR+STDV+
Sbjct: 98 KRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVS 157
Query: 660 RDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
D VKAL++LMT + +INPK ++ K F E A+ G +G
Sbjct: 158 VDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIG 216
>X07674-1|CAA30521.1| 558|Homo sapiens GDH protein.
Length = 558
Score = 152 bits (368), Expect = 2e-36
Identities = 78/179 (43%), Positives = 108/179 (60%)
Frame = +3
Query: 300 GVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEE 479
G+ + R + S + D+ D P FF MVE FF R +VEDKLVEDL++R E+
Sbjct: 44 GLALAARRHYSEAVADREDD------PNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQ 97
Query: 480 KKKXVAGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVT 659
K+ V GIL++++PC+H+L + FP+RRD G + +I GYRAQHS HRTP GGIR+STDV+
Sbjct: 98 KRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVS 157
Query: 660 RDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
D VKAL++LMT + +INPK ++ K F E A+ G +G
Sbjct: 158 VDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIG 216
>M37154-1|AAA52525.1| 558|Homo sapiens GLUD1 protein.
Length = 558
Score = 152 bits (368), Expect = 2e-36
Identities = 78/179 (43%), Positives = 108/179 (60%)
Frame = +3
Query: 300 GVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEE 479
G+ + R + S + D+ D P FF MVE FF R +VEDKLVEDL++R E+
Sbjct: 44 GLALAARRHYSEAVADREDD------PNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQ 97
Query: 480 KKKXVAGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVT 659
K+ V GIL++++PC+H+L + FP+RRD G + +I GYRAQHS HRTP GGIR+STDV+
Sbjct: 98 KRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVS 157
Query: 660 RDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
D VKAL++LMT + +INPK ++ K F E A+ G +G
Sbjct: 158 VDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIG 216
>M20867-1|AAA52526.1| 558|Homo sapiens GLUD1 protein.
Length = 558
Score = 152 bits (368), Expect = 2e-36
Identities = 78/179 (43%), Positives = 108/179 (60%)
Frame = +3
Query: 300 GVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEE 479
G+ + R + S + D+ D P FF MVE FF R +VEDKLVEDL++R E+
Sbjct: 44 GLALAARRHYSEAVADREDD------PNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQ 97
Query: 480 KKKXVAGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVT 659
K+ V GIL++++PC+H+L + FP+RRD G + +I GYRAQHS HRTP GGIR+STDV+
Sbjct: 98 KRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVS 157
Query: 660 RDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
D VKAL++LMT + +INPK ++ K F E A+ G +G
Sbjct: 158 VDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIG 216
>J03248-1|AAA52523.1| 558|Homo sapiens GLUD1 protein.
Length = 558
Score = 152 bits (368), Expect = 2e-36
Identities = 78/179 (43%), Positives = 108/179 (60%)
Frame = +3
Query: 300 GVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEE 479
G+ + R + S + D+ D P FF MVE FF R +VEDKLVEDL++R E+
Sbjct: 44 GLALAARRHYSEAVADREDD------PNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQ 97
Query: 480 KKKXVAGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVT 659
K+ V GIL++++PC+H+L + FP+RRD G + +I GYRAQHS HRTP GGIR+STDV+
Sbjct: 98 KRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVS 157
Query: 660 RDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
D VKAL++LMT + +INPK ++ K F E A+ G +G
Sbjct: 158 VDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIG 216
>BC112946-1|AAI12947.1| 558|Homo sapiens glutamate dehydrogenase 1
protein.
Length = 558
Score = 152 bits (368), Expect = 2e-36
Identities = 78/179 (43%), Positives = 108/179 (60%)
Frame = +3
Query: 300 GVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEE 479
G+ + R + S + D+ D P FF MVE FF R +VEDKLVEDL++R E+
Sbjct: 44 GLALAARRHYSEAVADREDD------PNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQ 97
Query: 480 KKKXVAGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVT 659
K+ V GIL++++PC+H+L + FP+RRD G + +I GYRAQHS HRTP GGIR+STDV+
Sbjct: 98 KRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVS 157
Query: 660 RDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
D VKAL++LMT + +INPK ++ K F E A+ G +G
Sbjct: 158 VDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIG 216
>BC040132-1|AAH40132.1| 558|Homo sapiens glutamate dehydrogenase 1
protein.
Length = 558
Score = 152 bits (368), Expect = 2e-36
Identities = 78/179 (43%), Positives = 108/179 (60%)
Frame = +3
Query: 300 GVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEE 479
G+ + R + S + D+ D P FF MVE FF R +VEDKLVEDL++R E+
Sbjct: 44 GLALAARRHYSEAVADREDD------PNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQ 97
Query: 480 KKKXVAGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVT 659
K+ V GIL++++PC+H+L + FP+RRD G + +I GYRAQHS HRTP GGIR+STDV+
Sbjct: 98 KRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVS 157
Query: 660 RDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
D VKAL++LMT + +INPK ++ K F E A+ G +G
Sbjct: 158 VDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIG 216
>AL136982-5|CAI17120.1| 558|Homo sapiens glutamate dehydrogenase 1
protein.
Length = 558
Score = 152 bits (368), Expect = 2e-36
Identities = 78/179 (43%), Positives = 108/179 (60%)
Frame = +3
Query: 300 GVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEE 479
G+ + R + S + D+ D P FF MVE FF R +VEDKLVEDL++R E+
Sbjct: 44 GLALAARRHYSEAVADREDD------PNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQ 97
Query: 480 KKKXVAGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVT 659
K+ V GIL++++PC+H+L + FP+RRD G + +I GYRAQHS HRTP GGIR+STDV+
Sbjct: 98 KRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVS 157
Query: 660 RDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
D VKAL++LMT + +INPK ++ K F E A+ G +G
Sbjct: 158 VDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIG 216
>AK222818-1|BAD96538.1| 558|Homo sapiens glutamate dehydrogenase 1
variant protein.
Length = 558
Score = 152 bits (368), Expect = 2e-36
Identities = 78/179 (43%), Positives = 108/179 (60%)
Frame = +3
Query: 300 GVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEE 479
G+ + R + S + D+ D P FF MVE FF R +VEDKLVEDL++R E+
Sbjct: 44 GLALAARRHYSEAVADREDD------PNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQ 97
Query: 480 KKKXVAGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVT 659
K+ V GIL++++PC+H+L + FP+RRD G + +I GYRAQHS HRTP GGIR+STDV+
Sbjct: 98 KRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVS 157
Query: 660 RDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
D VKAL++LMT + +INPK ++ K F E A+ G +G
Sbjct: 158 VDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIG 216
>X66310-1|CAA46995.1| 558|Homo sapiens glutamate dehydrogenase
(NAD(P)+) protein.
Length = 558
Score = 149 bits (361), Expect = 1e-35
Identities = 77/179 (43%), Positives = 108/179 (60%)
Frame = +3
Query: 300 GVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEE 479
G+ + R + S + D+ D P FF MVE FF R +VEDKLV+DL+++ E+
Sbjct: 44 GLALAARRHYSELVADREDD------PNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQ 97
Query: 480 KKKXVAGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVT 659
K+ V GIL++++PC+H+L + FP+RRD G + +I GYRAQHS HRTP GGIR+STDV+
Sbjct: 98 KRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVS 157
Query: 660 RDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
D VKAL++LMT + +INPK +E K F E A+ G +G
Sbjct: 158 VDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIG 216
>U08997-1|AAA20969.1| 558|Homo sapiens glutamate dehydrogenase
protein.
Length = 558
Score = 149 bits (361), Expect = 1e-35
Identities = 77/179 (43%), Positives = 108/179 (60%)
Frame = +3
Query: 300 GVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEE 479
G+ + R + S + D+ D P FF MVE FF R +VEDKLV+DL+++ E+
Sbjct: 44 GLALAARRHYSELVADREDD------PNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQ 97
Query: 480 KKKXVAGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVT 659
K+ V GIL++++PC+H+L + FP+RRD G + +I GYRAQHS HRTP GGIR+STDV+
Sbjct: 98 KRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVS 157
Query: 660 RDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
D VKAL++LMT + +INPK +E K F E A+ G +G
Sbjct: 158 VDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIG 216
>BC050732-1|AAH50732.1| 558|Homo sapiens glutamate dehydrogenase 2
protein.
Length = 558
Score = 149 bits (361), Expect = 1e-35
Identities = 77/179 (43%), Positives = 108/179 (60%)
Frame = +3
Query: 300 GVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEE 479
G+ + R + S + D+ D P FF MVE FF R +VEDKLV+DL+++ E+
Sbjct: 44 GLALAARRHYSELVADREDD------PNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQ 97
Query: 480 KKKXVAGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVT 659
K+ V GIL++++PC+H+L + FP+RRD G + +I GYRAQHS HRTP GGIR+STDV+
Sbjct: 98 KRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVS 157
Query: 660 RDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
D VKAL++LMT + +INPK +E K F E A+ G +G
Sbjct: 158 VDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIG 216
>AC006144-1|AAD05030.1| 558|Homo sapiens glutamate dehydrogenase 2
precursor protein.
Length = 558
Score = 149 bits (361), Expect = 1e-35
Identities = 77/179 (43%), Positives = 108/179 (60%)
Frame = +3
Query: 300 GVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEE 479
G+ + R + S + D+ D P FF MVE FF R +VEDKLV+DL+++ E+
Sbjct: 44 GLALAARRHYSELVADREDD------PNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQ 97
Query: 480 KKKXVAGILKLMEPCDHILEIQFPLRRDSGDYXMILGYRAQHSTHRTPTXGGIRFSTDVT 659
K+ V GIL++++PC+H+L + FP+RRD G + +I GYRAQHS HRTP GGIR+STDV+
Sbjct: 98 KRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVS 157
Query: 660 RDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPEXAQXGSLG 836
D VKAL++LMT + +INPK +E K F E A+ G +G
Sbjct: 158 VDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIG 216
>AB209406-1|BAD92643.1| 299|Homo sapiens glutamate dehydrogenase 1
variant protein.
Length = 299
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = +1
Query: 697 FKCACVXVPFGGATAGIRSIPKNXPSHDLEKITRRFPLXLPXK 825
+KCA V VPFGGA AG++ PKN ++LEKITRRF + L K
Sbjct: 66 YKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKK 108
Score = 41.5 bits (93), Expect = 0.004
Identities = 25/68 (36%), Positives = 35/68 (51%)
Frame = +3
Query: 633 GIRFSTDVTRDXVKALSALMTLQVRXXXXXXXXXXXXXQINPKEXSEP*PGKDHSSFPPE 812
GIR+STDV+ D VKAL++LMT + +INPK ++ K F E
Sbjct: 45 GIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTME 104
Query: 813 XAQXGSLG 836
A+ G +G
Sbjct: 105 LAKKGFIG 112
>BC110371-1|AAI10372.1| 1506|Homo sapiens VPRBP protein protein.
Length = 1506
Score = 34.3 bits (75), Expect = 0.68
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = -2
Query: 310 TFTPAGMIRNIVLRASF*TEFLS-GGTTDLAIFLRCSMVA-------YYVKYDNRVRNRV 155
TF + +++L F TEF++ GG L R SM A YY+ Y+ RV
Sbjct: 370 TFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERV 429
Query: 154 ALHLLNF*NKLIIFVSFMLDCS 89
+H N + ++ + ++++CS
Sbjct: 430 CMHPHNVLSDVVNYTLWLMECS 451
>AF061935-1|AAG27134.1| 1401|Homo sapiens HIV-1 Vpr-binding protein
protein.
Length = 1401
Score = 34.3 bits (75), Expect = 0.68
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = -2
Query: 310 TFTPAGMIRNIVLRASF*TEFLS-GGTTDLAIFLRCSMVA-------YYVKYDNRVRNRV 155
TF + +++L F TEF++ GG L R SM A YY+ Y+ RV
Sbjct: 265 TFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERV 324
Query: 154 ALHLLNF*NKLIIFVSFMLDCS 89
+H N + ++ + ++++CS
Sbjct: 325 CMHPHNVLSDVVNYTLWLMECS 346
>AB018343-1|BAA34520.2| 1521|Homo sapiens KIAA0800 protein protein.
Length = 1521
Score = 34.3 bits (75), Expect = 0.68
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = -2
Query: 310 TFTPAGMIRNIVLRASF*TEFLS-GGTTDLAIFLRCSMVA-------YYVKYDNRVRNRV 155
TF + +++L F TEF++ GG L R SM A YY+ Y+ RV
Sbjct: 385 TFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERV 444
Query: 154 ALHLLNF*NKLIIFVSFMLDCS 89
+H N + ++ + ++++CS
Sbjct: 445 CMHPHNVLSDVVNYTLWLMECS 466
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,645,739
Number of Sequences: 237096
Number of extensions: 2569501
Number of successful extensions: 11364
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11350
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12825217482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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