Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_P04
         (1037 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.9  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   4.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   6.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   6.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = +3

Query: 963  PXTXXGRXPXXPSPTPPXXPSPXP 1034
            P     + P  P P PP  P P P
Sbjct: 574  PNLPNAQPPPAPPPPPPMGPPPSP 597



 Score = 23.8 bits (49), Expect = 8.6
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 760 PXXPXFXPRHXTXXPFXPPPXPP 828
           P    +  R  T  P  PPP PP
Sbjct: 513 PHGAGYDGRDLTGGPLGPPPPPP 535


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -2

Query: 829 GGGXEGGXRGXXXDDGGRXXGXXGXRGXG 743
           GGG +G   G     GGR  G    RG G
Sbjct: 58  GGGDDGYGGGGRGGRGGRGGGRGRGRGRG 86



 Score = 23.8 bits (49), Expect = 8.6
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -2

Query: 829 GGGXEGGXRGXXXDDGGR 776
           GGG  GG  G    DGGR
Sbjct: 91  GGGFGGGGYGDRNGDGGR 108


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 6.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 125  SKSVYHKITVLGSIMTTCYSGGENSSKS*GIP 30
            S  ++HK+   G + T CYS   ++ K  G+P
Sbjct: 2265 STDIWHKLVDAGYLHTDCYS--TSAKKCHGLP 2294


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 6.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 125  SKSVYHKITVLGSIMTTCYSGGENSSKS*GIP 30
            S  ++HK+   G + T CYS   ++ K  G+P
Sbjct: 2266 STDIWHKLVDAGYLHTDCYS--TSAKKCHGLP 2295


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,886
Number of Sequences: 2352
Number of extensions: 8607
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 115107720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)