Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P04
(1037 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 27 0.074
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 27 0.075
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 1.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 26 2.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 3.1
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 3.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 3.1
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 29 5.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 25 5.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 25 5.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 25 5.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 24 6.7
Z69793-3|CAA93672.2| 709|Caenorhabditis elegans Hypothetical pr... 29 7.2
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 23 9.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 23 9.7
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 26.6 bits (56), Expect(3) = 0.074
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXPPXP 1026
P PP PPPP PP P
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPP 816
Score = 24.2 bits (50), Expect(3) = 0.074
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 802 PFXPPPXPPXCXP 840
P PPP PP C P
Sbjct: 766 PPPPPPPPPHCEP 778
Score = 21.4 bits (43), Expect(3) = 0.074
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 781 PRHXTXXPFXPPPXPP 828
P T P PPP PP
Sbjct: 714 PFRPTSRPKTPPPPPP 729
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 26.6 bits (56), Expect(3) = 0.075
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXPPXP 1026
P PP PPPP PP P
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPP 816
Score = 24.2 bits (50), Expect(3) = 0.075
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 802 PFXPPPXPPXCXP 840
P PPP PP C P
Sbjct: 766 PPPPPPPPPHCEP 778
Score = 21.4 bits (43), Expect(3) = 0.075
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 781 PRHXTXXPFXPPPXPP 828
P T P PPP PP
Sbjct: 714 PFRPTSRPKTPPPPPP 729
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = -2
Query: 826 GGXEGGXRGXXXDDGGRXXGXXGXRGXGPXXCVXWRGXWXPLXGXISWGLGXAHGW 659
GG +GG +G + GG+ G G + GP W G G WG G GW
Sbjct: 219 GGSQGGSQGGWGNQGGQQGGGRGGQ-QGPG---GWGGGGRG-GGWGGWGRGSRWGW 269
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 26.2 bits (55), Expect(2) = 2.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXPPXP 1026
P PP PPPP PP P
Sbjct: 501 PLPPIATPSSVPPPPPPPPPPP 522
Score = 22.6 bits (46), Expect(2) = 2.2
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +1
Query: 769 PXFXPRHXTXXPFXPPPXPPXCXP 840
P P + P PPP PP P
Sbjct: 485 PSPQPAEVSKSPPPPPPLPPIATP 508
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 769 PXFXPRHXTXXPFXPPPXPPXCXPLP 846
P F P P PPP PP C P P
Sbjct: 53 PQFCPPPPMCPPPPPPPPPPMCPPPP 78
Score = 25.8 bits (54), Expect(2) = 4.0
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 802 PFXPPPXPPXCXPLP 846
P PPP PP C P P
Sbjct: 28 PPCPPPPPPMCAPPP 42
Score = 22.2 bits (45), Expect(2) = 4.0
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXPPXP 1026
P PP PPPP P P
Sbjct: 44 PCPPPPICPPQFCPPPPMCPPP 65
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXPPXP 1026
P PP G PPPP PP P
Sbjct: 662 PVPPPGGLGGFMPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXPPXP 1026
P PP G PPPP PP P
Sbjct: 662 PVPPPGGLGGFMPPPPPPPPMP 683
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 829 GGGXEGGXRGXXXDDGGRXXGXXGXRG 749
GGG GG RG D GG G G G
Sbjct: 495 GGGDRGGFRGRSSDRGGDRGGFRGRSG 521
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 25.0 bits (52), Expect(2) = 5.7
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXP 1017
P PP G PPPP P
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
Score = 22.2 bits (45), Expect(2) = 5.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 802 PFXPPPXPPXCXPLP 846
P PPP P C P P
Sbjct: 758 PPPPPPPPGGCPPPP 772
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 25.0 bits (52), Expect(2) = 5.7
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXP 1017
P PP G PPPP P
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
Score = 22.2 bits (45), Expect(2) = 5.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 802 PFXPPPXPPXCXPLP 846
P PPP P C P P
Sbjct: 758 PPPPPPPPGGCPPPP 772
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 25.0 bits (52), Expect(2) = 5.9
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXP 1017
P PP G PPPP P
Sbjct: 355 PPPPPPGGFKGGPPPPPPP 373
Score = 22.2 bits (45), Expect(2) = 5.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 802 PFXPPPXPPXCXPLP 846
P PPP P C P P
Sbjct: 341 PPPPPPPPGGCPPPP 355
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical protein
F45B8.3 protein.
Length = 241
Score = 24.2 bits (50), Expect(2) = 6.7
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXP 1017
P PP A PPPP P
Sbjct: 111 PPPPAPAAPCCPPPPPPTP 129
Score = 23.0 bits (47), Expect(2) = 6.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 802 PFXPPPXPPXCXPLP 846
P PPP P C P P
Sbjct: 90 PPPPPPASPCCGPSP 104
>Z69793-3|CAA93672.2| 709|Caenorhabditis elegans Hypothetical
protein R03A10.3 protein.
Length = 709
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 119 SVYHKITVLGSIMTTCYSGGENSSKS*GIPLGVXS 15
S H IT L ++ TC++ GE+ ++S P+ + S
Sbjct: 416 STEHDITALEQMIDTCFTEGEHQAQSKPDPMNIES 450
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 23.4 bits (48), Expect(2) = 9.6
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXPP 1020
P P A PPPP PP
Sbjct: 1000 PSAPKAPAGPGGPPPPPPPP 1019
Score = 23.0 bits (47), Expect(2) = 9.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 1000 PPPPXPPXP 1026
PPPP PP P
Sbjct: 1012 PPPPPPPPP 1020
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 23.4 bits (48), Expect(2) = 9.7
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXPP 1020
P PP G PPPP P
Sbjct: 539 PPPPPVGMANGGPPPPPPLP 558
Score = 23.0 bits (47), Expect(2) = 9.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 1000 PPPPXPPXP 1026
PPPP PP P
Sbjct: 577 PPPPPPPPP 585
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,570,113
Number of Sequences: 27780
Number of extensions: 214139
Number of successful extensions: 1789
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2751568594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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