Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P04
(1037 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 34 0.13
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 27 1.2
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 31 1.7
At5g11550.1 68418.m01347 expressed protein 31 1.7
At1g61080.1 68414.m06877 proline-rich family protein 29 2.0
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 30 2.9
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 26 3.2
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 29 3.8
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 25 3.9
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 24 5.8
At5g38560.1 68418.m04662 protein kinase family protein contains ... 29 6.7
At1g31310.1 68414.m03831 hydroxyproline-rich glycoprotein family... 26 7.7
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 28 8.8
At3g43583.1 68416.m04636 hypothetical protein 28 8.8
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 28 8.8
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 26 9.2
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 34.3 bits (75), Expect = 0.13
Identities = 33/147 (22%), Positives = 35/147 (23%), Gaps = 1/147 (0%)
Frame = +1
Query: 580 PPPIALSXIPHTAXIPLDRSWXIXXYXTRVRPPNPNLXTQXMXPXXPSTQRXXXDRXLXX 759
PPP + P T P S Y PP P P P
Sbjct: 411 PPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPP 470
Query: 760 PXXPXFXPRHXTXXPFXPPPXPP-XCXPLPHXRXGXXXXXXXXXXXXXXXXXXXXXXXXX 936
P P P + P PPP PP P P
Sbjct: 471 PPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPT 530
Query: 937 XXXXXXXXPXPPHXGAXXXXXPPPPXP 1017
P PPH PPPP P
Sbjct: 531 PVYCTRPPPPPPHSPPPPQFSPPPPEP 557
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 26.6 bits (56), Expect(2) = 1.2
Identities = 22/92 (23%), Positives = 29/92 (31%), Gaps = 3/92 (3%)
Frame = +1
Query: 580 PPPIALSXIPHTAXIPLDRSWXIXXYXTRVRPPNPNLXTQXMX---PXXPSTQRXXXDRX 750
PPP + P +P R PP P+ P PS++ R
Sbjct: 425 PPPPSFKMSPTVRVLPPPPPSSKMSPTFRATPPPPSSKMSPSFRATPPPPSSKMSPSFRA 484
Query: 751 LXXPXXPXFXPRHXTXXPFXPPPXPPXCXPLP 846
P P + + PPP PP P P
Sbjct: 485 TPPPPSSKMSP---SVKAYPPPPPPPEYEPSP 513
Score = 23.0 bits (47), Expect(2) = 1.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXPPXP 1026
P PP PP P PP P
Sbjct: 538 PSPPPPYIYSSPPPPSPSPPPP 559
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +1
Query: 673 PPNPNLXTQXMXPXXPSTQRXXXDRXLXXPXXPXFXPRHXTXXPFXPPPXPPXCXPLP 846
P P L T + P P+ P P P P PPP P PLP
Sbjct: 305 PTPPTLPTIPLLPTPPTPTLPPIPTIPTLPPLPVLPPVPIVNPPSLPPPPPSFPVPLP 362
>At5g11550.1 68418.m01347 expressed protein
Length = 314
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +2
Query: 962 PXHXTRAPXX-PPXPHPPXXPXPXP 1033
P H + P PP PHPP P P P
Sbjct: 69 PHHLDQTPSTAPPPPHPPPPPPPLP 93
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/75 (24%), Positives = 18/75 (24%)
Frame = +1
Query: 802 PFXPPPXPPXCXPLPHXRXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXPPHXG 981
P PPP PP PL H P PP
Sbjct: 456 PPPPPPPPPAVMPLKHFAPPPPPPLPPAVMPLKHFAPPPPTPPAFKPLKGSAPPPPPPPP 515
Query: 982 AXXXXXPPPPXPPXP 1026
PPP PP P
Sbjct: 516 LPTTIAAPPPPPPPP 530
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/94 (24%), Positives = 24/94 (25%), Gaps = 5/94 (5%)
Frame = +1
Query: 760 PXXPXFXP-RHXTXXPFXPPPXPPXCXPLPHXRXGXXXXXXXXXXXXXXXXXXXXXXXXX 936
P P P +H P PPP PP PL H
Sbjct: 461 PPPPAVMPLKHFAPPP--PPPLPPAVMPLKHFAPPPPTPPAFKPLKGSAPPPPPPPPLPT 518
Query: 937 XXXXXXXXPXPPHXGAXXXXXPPPP----XPPXP 1026
P PP PPPP PP P
Sbjct: 519 TIAAPPPPPPPPRAAVAPPPPPPPPGTAAAPPPP 552
Score = 26.6 bits (56), Expect(2) = 2.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXPPXP 1026
P PP PPPP PP P
Sbjct: 442 PTPPIADIAISMPPPPPPPPPP 463
Score = 22.2 bits (45), Expect(2) = 2.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 805 FXPPPXPPXCXPL 843
F PPP PP PL
Sbjct: 415 FPPPPPPPPPPPL 427
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 760 PXXPXFXPRHXTXXPFXPPPXPPXCXPLPH 849
P P F P H P PP P P PH
Sbjct: 33 PPPPPFSPPHHPPPPHFSPPHQPPPSPYPH 62
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 760 PXXPXFXPRHXTXXPFXPPPXPPXCXPLPH 849
P P F P H P P PP P PH
Sbjct: 44 PPPPHFSPPHQPPPSPYPHPHPPPPSPYPH 73
>At1g31810.1 68414.m03904 formin homology 2 domain-containing protein
/ FH2 domain-containing protein low similarity to
SP|P48608 Diaphanous protein {Drosophila melanogaster};
contains Pfam profile PF02181: Formin Homology 2(FH2)
Domain
Length = 1201
Score = 26.2 bits (55), Expect(2) = 3.2
Identities = 19/76 (25%), Positives = 19/76 (25%), Gaps = 4/76 (5%)
Frame = +1
Query: 811 PPPXPPXCXPLPHXRXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXPP----HX 978
PPP PP PLP P PP
Sbjct: 572 PPPPPPPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPPPPPPPPSFGST 631
Query: 979 GAXXXXXPPPPXPPXP 1026
G PPPP PP P
Sbjct: 632 GNKRQAQPPPPPPPPP 647
Score = 21.8 bits (44), Expect(2) = 3.2
Identities = 11/40 (27%), Positives = 13/40 (32%)
Frame = +1
Query: 709 PXXPSTQRXXXDRXLXXPXXPXFXPRHXTXXPFXPPPXPP 828
P ST + P P + P PPP PP
Sbjct: 512 PLFMSTTSFSPSQPPPPPPPPPLFTSTTSFSPSQPPPPPP 551
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +1
Query: 673 PPNPNLXTQXMXPXXPSTQRXXXDRXLXXPXXPXFXPRHXTXXPFXPPPXPPXCXPLP 846
PP P P PS+ L P P P P PPP PP P P
Sbjct: 1073 PPLPPSPPPPSPPLPPSSLPPPPPAALFPPLPPP--PSQPPPPPLSPPPSPPPPPPPP 1128
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 25.0 bits (52), Expect(2) = 3.9
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXPPXP 1026
P P PPPP PP P
Sbjct: 70 PPPKKSSCPPSPLPPPPPPPPP 91
Score = 23.0 bits (47), Expect(2) = 3.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 802 PFXPPPXPPXCXPLP 846
P P P PP C P P
Sbjct: 50 PPPPSPPPPSCTPSP 64
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains leucine-rich
repeats, Pfam:PF00560; contains proline rich extensin
domains, INTERPRO:IPR002965
Length = 470
Score = 24.2 bits (50), Expect(2) = 5.8
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXPP 1020
P PP PPPP PP
Sbjct: 402 PPPPPPYVYPSPPPPPPSPP 421
Score = 23.4 bits (48), Expect(2) = 9.7
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXPPXP 1026
P PP PPPP P P
Sbjct: 400 PPPPPPPPYVYPSPPPPPPSPP 421
Score = 23.0 bits (47), Expect(2) = 9.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 760 PXXPXFXPRHXTXXPFXPPPXPPXCXPLP 846
P P P P PPP PP P P
Sbjct: 376 PPSPPPPPPPPPPPPPPPPPPPPPPPPPP 404
Score = 23.0 bits (47), Expect(2) = 5.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 760 PXXPXFXPRHXTXXPFXPPPXPPXCXPLP 846
P P P P PPP PP P P
Sbjct: 377 PSPPPPPPPPPPPPPPPPPPPPPPPPPPP 405
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/87 (22%), Positives = 27/87 (31%)
Frame = +1
Query: 580 PPPIALSXIPHTAXIPLDRSWXIXXYXTRVRPPNPNLXTQXMXPXXPSTQRXXXDRXLXX 759
PPP +S P ++ P T P P + P P+T + +
Sbjct: 56 PPPPVVSSPPPSSSPPPSPPVITSPPPTVASSPPPPVVIASPPPSTPATTPPAPPQTVSP 115
Query: 760 PXXPXFXPRHXTXXPFXPPPXPPXCXP 840
P P P PPP P P
Sbjct: 116 PPPPDASPSPPAPTTTNPPPKPSPSPP 142
>At1g31310.1 68414.m03831 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 383
Score = 26.2 bits (55), Expect(2) = 7.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 802 PFXPPPXPPXCXPLP 846
P PPP PP PLP
Sbjct: 219 PLQPPPPPPPSQPLP 233
Score = 20.6 bits (41), Expect(2) = 7.7
Identities = 8/20 (40%), Positives = 8/20 (40%)
Frame = +1
Query: 961 PXPPHXGAXXXXXPPPPXPP 1020
P PP PPP PP
Sbjct: 225 PPPPSQPLPRPLLLPPPPPP 244
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing protein
contains similarity to SP|Q02917 Early nodulin 55-2
precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 957 PSPXTXXGRXPXXPSPTPPXXPSP 1028
PSP + + P PSP P PSP
Sbjct: 279 PSPSSSPAQSPATPSPMTPQSPSP 302
>At3g43583.1 68416.m04636 hypothetical protein
Length = 100
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 977 RAPXXPPXPHPPXXPXPXP 1033
R P PP P PP P P P
Sbjct: 21 RPPEKPPSPEPPPSPEPPP 39
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 28.3 bits (60), Expect = 8.8
Identities = 19/92 (20%), Positives = 30/92 (32%), Gaps = 2/92 (2%)
Frame = +1
Query: 580 PPPIALSXIPHTAXIPLDRSWXIXXYXTRVRPPNPNLX--TQXMXPXXPSTQRXXXDRXL 753
PPP P +P I Y + PP+ + + P P + +
Sbjct: 383 PPPPTFKMSPEVRTLPPP----IYVYSSPPPPPSSKMSPTVRAYSPPPPPSSKMSPSVRA 438
Query: 754 XXPXXPXFXPRHXTXXPFXPPPXPPXCXPLPH 849
P P + + + PPP P P P+
Sbjct: 439 YSPPPPPYSKMSPSVRAYPPPPPPSPSPPPPY 470
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats, Pfam:PF00560;
contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 25.8 bits (54), Expect(2) = 9.2
Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Frame = +1
Query: 961 PXPPHXGAXXXXX--PPPPXPPXP 1026
P PPH + PPPP PP P
Sbjct: 567 PPPPHVYSPPPPVASPPPPSPPPP 590
Score = 20.6 bits (41), Expect(2) = 9.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 811 PPPXPPXCXPLP 846
PPP PP P P
Sbjct: 534 PPPQPPMPSPSP 545
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,884,212
Number of Sequences: 28952
Number of extensions: 212208
Number of successful extensions: 2658
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 12,070,560
effective HSP length: 82
effective length of database: 9,696,496
effective search space used: 2550178448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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