Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_P01
(877 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr 2... 86 5e-18
SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces po... 31 0.22
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 28 1.5
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 2.0
SPBC19C7.08c |||leucine carboxyl methyltransferase|Schizosacchar... 27 4.6
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 26 6.1
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 26 6.1
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 26 8.1
SPBC1271.03c |||phosphoprotein phosphatase|Schizosaccharomyces p... 26 8.1
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 26 8.1
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 26 8.1
>SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 474
Score = 86.2 bits (204), Expect = 5e-18
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = +2
Query: 158 TLPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELR 337
+L ++++ +D+ KD + L AV+IPSVS DV R + M ++ + ++GA E R
Sbjct: 2 SLDKLYEVIDKKKDEFVTRLSRAVSIPSVSADVTLRPKVVEMADFVVSEFTKLGAKMEKR 61
Query: 338 DVGFQTIDGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQP-GFEI*WMGD 487
D+G+ +DG+DV NDP K TV IY H DVQP E W D
Sbjct: 62 DIGYHQMDGQDVPLPPIVLGQYGNDPSKKTVLIYNHFDVQPASLEDGWSTD 112
Score = 77.8 bits (183), Expect = 2e-15
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +3
Query: 474 DGWETEPFEL-VERNEKLYGRGSTDDKGPVLGWLHTINAYKGTGAELPVNLKSIFECMEE 650
DGW T+PF L V+ +++GRG+TDDKGP++GW+ I A+K G + PVNL FE MEE
Sbjct: 107 DGWSTDPFTLTVDNKGRMFGRGATDDKGPLIGWISAIEAHKELGIDFPVNLLMCFEGMEE 166
Query: 651 SG 656
G
Sbjct: 167 YG 168
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 662 KGLDSLLMDQLKPEGFFDXVDXVCISXTXWWG 757
+GL+ L+ + + E +F D VCIS T W G
Sbjct: 170 EGLEDLI--RAEAEKYFAKADCVCISDTYWLG 199
>SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 596
Score = 31.1 bits (67), Expect = 0.22
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 474 DGWETEPFELVERNEKLYGRGSTDDKGPVLGWLHTI 581
D W PF N +Y RG+ DDK V+ L +
Sbjct: 209 DRWYFPPFSATYHNGHVYSRGAADDKNSVVAILEAL 244
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 708 NPSGFNWSINKLSXPFGNQIPPYIRKWT 625
NP+ WS +L P+G P Y R+ T
Sbjct: 226 NPTSSQWSDQRLGVPYGPDSPLYYRRAT 253
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 2.0
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = -2
Query: 411 SLPNTPTKTGGS*TSLPSIV*KPTSLNSVVAPTSFNLSCIQ*TI---RMQSARYFTSHET 241
S ++PT T + +S S PTS +S ++ +S + S T+ M S+ F+S T
Sbjct: 278 SSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPT 337
Query: 240 DGMATAS 220
+T S
Sbjct: 338 SSSSTIS 344
>SPBC19C7.08c |||leucine carboxyl
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 681
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 500 FKRFSLPS-IRFQSQVVHPNDHRYKLYFFLDHYPIR 396
F F + S ++ ++V P D + YFFL HY I+
Sbjct: 281 FWNFLMDSKLKHLCEMVEPFDEWEEFYFFLQHYSIQ 316
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 26.2 bits (55), Expect = 6.1
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 583 LMVCSQPSTGPLSSVEPRPYNFSLRSTSSKGSVSHPSDFKARLYIQMTIDTN 428
L S T P S+++P+ Y SL S K + KAR +Q I+TN
Sbjct: 224 LAQASSNLTSP-STIDPKGYLTSLNSMVPKNANDLGDIRKARKLLQSVIETN 274
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 107 IIQ*VPNKFLAKMATEKTLPEIFKYV 184
+I+ VPN FL K+ KT+ +F ++
Sbjct: 1135 LIRCVPNNFLRKVLPVKTIDTVFSWI 1160
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.8 bits (54), Expect = 8.1
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = -2
Query: 720 TXSKNPSGFNWSINKLSXPFGNQIPPYIRKWTSN*QAAQHQCPYRH*WCAANQVQVLYH 544
T + NPS WS F IRKW N +++ +R +C +NQ + H
Sbjct: 201 TDTINPSTSIWSCGTCYHVFHLSC---IRKWCKNSIEQRNEDAWRCPYCQSNQTETSLH 256
>SPBC1271.03c |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 128 KFLAKMATEKTLPEIFKYVDQNKDSYKQ 211
KF K+ +K+L + KY+D+ ++YK+
Sbjct: 208 KFPFKILADKSLEDNLKYLDELDENYKK 235
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 74 SLYHFFLLIINIIQ*VPNKFLAKMATEKTLPEIFKYV 184
SLYH F + I P K L ++ E TL + K V
Sbjct: 261 SLYHIFKWCSDFISKPPTKSLIRLLAEHTLNPVEKSV 297
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -3
Query: 488 SLPSIRFQSQVVHPN 444
S PS+ FQ+++VHPN
Sbjct: 67 SPPSVYFQTKIVHPN 81
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,310,713
Number of Sequences: 5004
Number of extensions: 70489
Number of successful extensions: 231
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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