Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_O23
(1003 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 29 0.050
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 2.5
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 24 2.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 4.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 4.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 10.0
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 10.0
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 29.5 bits (63), Expect = 0.050
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 882 PPPXPPXXPXPPXXXPPXXPPPPXXPPPXXPPXXXP 989
P P P P P P P P PPP PP P
Sbjct: 23 PQPSPHQSPQAPQRGSP--PNPSQGPPPGGPPGAPP 56
Score = 28.3 bits (60), Expect = 0.12
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 858 PXPPPPXXPPPXPPXXPXPPXXXPPXXPPPPXXPPPXXPPXXXP 989
P P P P P PP P PPP PP PP P
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPN---PSQGPPPGG-PPGAPPSQNP 60
Score = 27.5 bits (58), Expect = 0.20
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 844 PSPXPPXPPPPXXPPPXPPXXPPXPXXPXXXXPPPPXXPXPPXPPXXXP 990
PS P P P P P P P PPP P P PP P
Sbjct: 16 PSSGAPGPQPS---PHQSPQAPQRGSPPNPSQGPPPGGP-PGAPPSQNP 60
Score = 27.5 bits (58), Expect = 0.20
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 871 PPXXPPPXPPXXPPXPXXPXXXXPPPPXXPXPPXPPXXXPP 993
P P P P P PP P PP P PP
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
Score = 25.4 bits (53), Expect = 0.81
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 849 PXPPXPPPPXXPPPXPP 899
P P PPP PP PP
Sbjct: 40 PNPSQGPPPGGPPGAPP 56
Score = 24.2 bits (50), Expect = 1.9
Identities = 14/44 (31%), Positives = 14/44 (31%), Gaps = 2/44 (4%)
Frame = +3
Query: 837 SXXXPXPPXPPPPXXPPPXPPXXPXPPXXXPPXXPP--PPXXPP 962
S P P P P P P PP PP PP P
Sbjct: 17 SSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.8 bits (49), Expect = 2.5
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 844 PSPXPPXPPPPXXPP 888
P P PP PPP P
Sbjct: 339 PKPAPPPPPPSSSGP 353
Score = 23.4 bits (48), Expect = 3.3
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 867 PPPXXPPPXPPXXPXP 914
PP PPP PP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.0 bits (47), Expect = 4.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 847 SPXPPXPPPPXXPP 888
S PP P PP PP
Sbjct: 335 SDTPPKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 7.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 864 PPPPXXPPPXP 896
PP P PPP P
Sbjct: 338 PPKPAPPPPPP 348
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.8 bits (49), Expect = 2.5
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 968 GGXGXXGGGGXXXXGXXGXGGXXGGXGGGXXGGGGXG 858
GG G GG G G G GG GGGG G
Sbjct: 20 GGPGSSSAGG-VVTGASGGSIVVGANNGG--GGGGLG 53
Score = 21.8 bits (44), Expect = 10.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -1
Query: 964 GGGXXGGGGXXGGXXXGGXGXXGGXGGGXXGGGGXG 857
G G GG G G GGG GGG G
Sbjct: 21 GPGSSSAGGVVTGASGGSIVVGANNGGG---GGGLG 53
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 4.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 995 GGGXXXGGXGGXGXXGG 945
GGG G GG G GG
Sbjct: 1705 GGGGSLAGLGGLGGLGG 1721
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 4.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 995 GGGXXXGGXGGXGXXGG 945
GGG G GG G GG
Sbjct: 1701 GGGGSLAGLGGLGGLGG 1717
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 10.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 847 SPXPPXPPP 873
SP PP PPP
Sbjct: 1856 SPEPPPPPP 1864
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.8 bits (44), Expect = 10.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 158 SFDECMHIGEADSQQDNQQLVHFGY 84
S D + + D+Q+DN Q++ + Y
Sbjct: 298 SKDSLVFVDNHDTQRDNPQILTYKY 322
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,814
Number of Sequences: 438
Number of extensions: 12735
Number of successful extensions: 66
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33258225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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