BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_O22
(981 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 29 0.049
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.79
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 1.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.8
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.2
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 23 5.6
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 22 9.7
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 22 9.7
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 9.7
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 9.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 9.7
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 22 9.7
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 29.5 bits (63), Expect = 0.049
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +3
Query: 822 PKXXPPPPXPXPLXXPPTXXXSPPXPNXXFPXRPPPPXXPXPXPPXPPP 968
P P P P P P P PN P + PPP P PP P
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSP-PN---PSQGPPPGGPPGAPPSQNP 60
Score = 22.6 bits (46), Expect = 5.6
Identities = 10/29 (34%), Positives = 11/29 (37%)
Frame = +3
Query: 891 PXPNXXFPXRPPPPXXPXPXPPXPPPPPP 977
P + P R PP PP PP P
Sbjct: 27 PHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55
Score = 22.2 bits (45), Expect = 7.4
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 870 PTXXXSPPXPNXXFPXRPPPPXXPXPXPPXPPPPPP 977
P+ SP P P P P P PP PP
Sbjct: 25 PSPHQSPQAPQRGSPPNPSQ----GPPPGGPPGAPP 56
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.79
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 945 PXPPXPPPPPP 977
P P PPPPPP
Sbjct: 338 PPKPAPPPPPP 348
Score = 22.6 bits (46), Expect = 5.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 939 PXPXPPXPPP 968
P P PP PPP
Sbjct: 339 PKPAPPPPPP 348
Score = 21.8 bits (44), Expect = 9.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 822 PKXXPPPPXP 851
PK PPPP P
Sbjct: 339 PKPAPPPPPP 348
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.6 bits (51), Expect = 1.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 939 PXPXPPXPPPPPP 977
P P PPPPPP
Sbjct: 1852 PVSGSPEPPPPPP 1864
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.2 bits (50), Expect = 1.8
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +3
Query: 843 PXPXPLXXPPTXXXSPPXPNXXFPXRPPPPXXPXPXPPXPPPPP 974
P P + P P P F PPP P P P P
Sbjct: 1139 PGPNGIKMPSFMEGMPHLPFTPFNFWNPPPFMPSPFMAGAPNVP 1182
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 3.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 951 PPXPPPPP 974
PP PPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 954 PXPPPPPP 977
P PPPPPP
Sbjct: 1355 PPPPPPPP 1362
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 22.6 bits (46), Expect = 5.6
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 98 GNNRPVYISQPRPPHPRLRREAEPEAE 124
Score = 22.6 bits (46), Expect = 5.6
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 154 GNNRPVYISQPRPPHPRLRREAEPEAE 180
Score = 21.8 bits (44), Expect = 9.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 42 GNNRPVYIPQPRPPHPRLRREAEPEAE 68
Score = 21.8 bits (44), Expect = 9.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 182 GNNRPVYIPQPRPPHPRLRREAEPEAE 208
Score = 21.8 bits (44), Expect = 9.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 210 GNNRPVYIPQPRPPHPRLRREAEPEAE 236
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 21.8 bits (44), Expect = 9.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 43 GNNRPVYIPQPRPPHPRLRREAEPEAE 69
Score = 21.8 bits (44), Expect = 9.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 71 GNNRPVYIPQPRPPHPRLRREAEPEAE 97
Score = 21.8 bits (44), Expect = 9.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 99 GNNRPVYIPQPRPPHPRLRREAEPEAE 125
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.8 bits (44), Expect = 9.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 43 GNNRPIYIPQPRPPHPRLRREAEPKAE 69
Score = 21.8 bits (44), Expect = 9.7
Identities = 9/30 (30%), Positives = 11/30 (36%)
Frame = +2
Query: 887 PPPSKXNXPPXPPPXXXPPXXPPRXXPPXP 976
PP + P P P P+ PP P
Sbjct: 111 PPHPRLRREPEAEPGNNRPVYIPQPRPPHP 140
Score = 21.8 bits (44), Expect = 9.7
Identities = 9/30 (30%), Positives = 11/30 (36%)
Frame = +2
Query: 887 PPPSKXNXPPXPPPXXXPPXXPPRXXPPXP 976
PP + P P P P+ PP P
Sbjct: 137 PPHPRLRREPEAEPGNNRPVYIPQPRPPHP 166
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 9.7
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +3
Query: 840 PPXPXPLXXPPTXXXSPPXPNXXF 911
PP P P PP P N F
Sbjct: 152 PPTPFPRFIPPNAYRFRPPQNPRF 175
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 9.7
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +3
Query: 840 PPXPXPLXXPPTXXXSPPXPNXXF 911
PP P P PP P N F
Sbjct: 152 PPTPFPRFIPPNAYRFRPPQNPRF 175
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 9.7
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +3
Query: 840 PPXPXPLXXPPTXXXSPPXPNXXF 911
PP P P PP P N F
Sbjct: 390 PPTPFPRFIPPNAYRFRPPQNPRF 413
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 21.8 bits (44), Expect = 9.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 14 GNNRPVYIPQPRPPHPRLRREAEPEAE 40
Score = 21.8 bits (44), Expect = 9.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 42 GNNRPVYIPQPRPPHPRLRREAEPEAE 68
Score = 21.8 bits (44), Expect = 9.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 70 GNNRPVYIPQPRPPHPRLRREAEPEAE 96
Score = 21.8 bits (44), Expect = 9.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 98 GNNRPVYIPQPRPPHPRLRREAEPEAE 124
Score = 21.8 bits (44), Expect = 9.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 126 GNNRPVYIPQPRPPHPRLRREAKPEAE 152
Score = 21.8 bits (44), Expect = 9.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 97 GSN*PSXKGDPRPRXPTFKSEGIPYSE 17
G+N P PRP P + E P +E
Sbjct: 154 GNNRPVYIPQPRPPHPRLRREAEPEAE 180
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,667
Number of Sequences: 438
Number of extensions: 7000
Number of successful extensions: 83
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32411652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -