Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_O21
         (906 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   0.62 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.62 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   3.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   4.3  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   4.3  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 25.4 bits (53), Expect = 0.62
 Identities = 11/29 (37%), Positives = 11/29 (37%)
 Frame = +1

Query: 796 IPRPXXXPPPXPXXPPXXPPXPPXPXPPP 882
           IP P    P         P  PP P PPP
Sbjct: 77  IPSPKRSSPILAEKVSVSPTTPPTPSPPP 105



 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/38 (26%), Positives = 11/38 (28%)
 Frame = +3

Query: 786 PAXYPPPXXXXPPXXXXXXXXPXXXPPPPXPPSXXPPP 899
           P   PP      P              P  PP+  PPP
Sbjct: 68  PVALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPP 105


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.62
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -1

Query: 507 ILPLFY*LLKIFMFICLRYYCRYFCCIXVLAAKQYPCFSISLFGLTITSFL 355
           +L ++Y    + + +C+ Y+CR F    ++    + C + SL+ L  T +L
Sbjct: 282 LLCIYYFYCALIILLCIYYFCRAF----IIFPTHFYC-AFSLYPLKSTFYL 327



 Score = 22.6 bits (46), Expect = 4.3
 Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
 Frame = -1

Query: 507 ILPLFY*LLKIFMFICLRY-YCRYFC----CIXVLAAKQYPCFSISLFGLTITSFL*YFF 343
           +L ++Y ++ +F  +C+ Y YC +       + +L    + C  I +F + +     + F
Sbjct: 130 LLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFI-IFTMHLLFCCAFIF 188

Query: 342 LKLYRSISLC-STTTLYLI 289
             ++    LC    TL+L+
Sbjct: 189 FNMHLLFLLCLDYFTLHLL 207


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = +1

Query: 841 PXXPPXPPXPXPPPXXPPPXXP 906
           P  P  PP P PP   P    P
Sbjct: 175 PPLPQVPPLPLPPIFPPTMINP 196


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 303 TLYLILFVFL*FRTVD*SFSLLEYVD 226
           TL + LF FL   T+  SF +L +VD
Sbjct: 102 TLIVTLFTFLARGTLIKSFDMLSHVD 127


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 303 TLYLILFVFL*FRTVD*SFSLLEYVD 226
           TL + LF FL   T+  SF +L +VD
Sbjct: 102 TLIVTLFTFLARGTLIKSFDMLSHVD 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,720
Number of Sequences: 336
Number of extensions: 4319
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25237652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)