Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_O21
(906 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 42 1e-04
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 40 6e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.003
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 37 0.005
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 36 0.006
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.014
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.014
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.014
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.018
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 31 0.23
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.39
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 30 0.52
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.2
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 28 2.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 2.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.7
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 27 4.8
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.8
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.4
SPBC17G9.13c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 8.5
SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|c... 26 8.5
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 41.9 bits (94), Expect = 1e-04
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +1
Query: 787 PPXIPRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPPPXXP 906
PP + P PPP PP P PP P PP PPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPP--PSAPPMPAGPPSAPPPPLP 1736
Score = 32.7 bits (71), Expect = 0.074
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +1
Query: 787 PPXIPRPXXXPP---PXPXXPPXXPPXPPXPXPPPXXPPPXXP 906
PP P+ P P P PP P PP P P PP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 787 PPXIPRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPPPXXP 906
PP P PP P P P PP P P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 30.3 bits (65), Expect = 0.39
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +3
Query: 786 PAXYPPPXXX-XPPXXXXXXXXPXXXPPPPXPPSXXPPPP 902
P PPP PP P PPPP P S P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/36 (36%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Frame = +1
Query: 805 PXXXPPPXPXXPPXXPPXPPXPXPPP--XXPPPXXP 906
P PP P P P PPP PPP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 39.5 bits (88), Expect = 6e-04
Identities = 19/33 (57%), Positives = 19/33 (57%)
Frame = -2
Query: 896 GGGXXGGGXGXGGXGGXXGGXXGXGGGXXXGRG 798
GGG GG G GG GG GG G GGG GRG
Sbjct: 446 GGGSRGGRGGFGGRGGF-GGRGGFGGGRGRGRG 477
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 787 PPXIPRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPPP 897
PP P P P P P PP P PPP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 36.7 bits (81), Expect = 0.005
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Frame = +1
Query: 787 PPXIPRPXXXPPPXP----XXPPXXPPXPPXPXPPPXXPPP 897
P P P PPP P PP PP PPP PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 32.3 bits (70), Expect = 0.097
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 9/46 (19%)
Frame = +1
Query: 787 PPXIPRPXXXPPPXPXXPPXX---PPXPPXPXP------PPXXPPP 897
PP + P P P P PP P PP P P PP PPP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 787 PPXIPRPXXXPPPXPXXPPXXPPXPPXPXPPP 882
PP P PPP P PP P PPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.91
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 786 PAXYPPPXXXXPPXXXXXXXXPXXXPPPPXPPSXXPPPP 902
P P P PP P PPPP PPPP
Sbjct: 742 PTPAPAPIPVPPP--APIMGGPPPPPPPPGVAGAGPPPP 778
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Frame = +1
Query: 817 PPPXPXXPPXXPPXPPXPXPPP--XXPPPXXP 906
PPP P P P P P P PPP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 786 PAXYPPPXXXXPPXXXXXXXXPXXXPPPPXPPSXXPPPP 902
PA P P PP P PPP + PPPP
Sbjct: 744 PAPAPIPV---PPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +3
Query: 786 PAXYPPPXXXXPPXXXXXXXXPXXXPPPPXPP 881
P P P PP PPPP PP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 36.7 bits (81), Expect = 0.005
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -2
Query: 905 GXXGGGXXGGGXGXGGXGGXXGGXXGXGGGXXXGRG 798
G GGG G G GG GG GG G GG +G
Sbjct: 34 GARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 33.5 bits (73), Expect = 0.042
Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -2
Query: 905 GXXGGGXXGGGXGXGGXGGXXGGXXGXGGGXXXGR-GIXGGXXV 777
G GG GG G G G GG G GG GR G GG V
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKV 73
Score = 32.7 bits (71), Expect = 0.074
Identities = 21/42 (50%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 905 GXXGG-GXXGGGXGXGGXGGXXGGXXGXG-GGXXXGRGIXGG 786
G GG G G G GG GG GG G G GG GRG GG
Sbjct: 13 GSRGGRGGFNG--GRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -1
Query: 906 GXXGGGXXRGGXGXGGXGXXXGXXXXXGGGXXGGAGDXGRXXSXXXGXXXXVE 748
G G G RGG GG G G GG G G G G +E
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKVIIE 76
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -2
Query: 893 GGXXGGGXGXGGXGGXXGGXXGX-GGGXXXGRG 798
GG G G GG G GG G GG GRG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRG 41
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 906 GXXGGGXXRGGXGXGGXGXXXGXXXXXGGGXXGGAGDXG 790
G G RGG G G G GGG G G G
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRG 48
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/45 (44%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Frame = -1
Query: 906 GXXGG-GXXRGGXGX--GGXGXXXGXXXXXGGGXXGGA--GDXGR 787
G GG G RGG G GG G G GG GGA G GR
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGR 50
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 36.3 bits (80), Expect = 0.006
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +2
Query: 182 WVREFAIRSSALAQQSTYSKRLKD*STVLNQRKTNKIR*SVVVEQSEIER*SFKKKYHRK 361
++R F RSS ++ S K ++D +R+T + + V+EQ ++ K+ H
Sbjct: 605 FIRSFTFRSSNNSRMSQVFKDIQDMKKAATKRETERKEFADVIEQDKLIEIKNKRPAHIN 664
Query: 362 DVIVRP 379
DV VRP
Sbjct: 665 DVYVRP 670
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.1 bits (77), Expect = 0.014
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 805 PXXXPPPXPXXPPXXPPXPPXPXPPP 882
P PPP P P PP P P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 787 PPXIPRPXXXPPPXPXXPPXXPPXPPXP 870
PP P P PPP PP PP PP P
Sbjct: 5 PPGNPPP--PPPPPGFEPPSQPPPPPPP 30
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 817 PPPXPXXPPXXPPXPPXPXPPPXXPP 894
PP P PP P P PPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 30.7 bits (66), Expect = 0.30
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 820 PPXPXXPPXXPPXPPXPXPPPXXPPP 897
PP PP PP P PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +1
Query: 838 PPXXPPXPPXPX---PPPXXPPPXXP 906
PP PP PP P PP PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +3
Query: 801 PPXXXXPPXXXXXXXXPXXXPPPPXP 878
PP PP P PPPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +3
Query: 804 PXXXXPPXXXXXXXXPXXXPPPPXPP 881
P PP P PPPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.1 bits (77), Expect = 0.014
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +1
Query: 787 PPXIPR-PXXXPPPXPXXPPXXPPXPPXPXPPPXXPPP 897
PP P P PP P P PP PP PPP P
Sbjct: 173 PPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +1
Query: 799 PRPXXXPPPXPXXPPXXPPXPPXP--XPPPXXP 891
PRP PP PP PP P PPP P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = +1
Query: 802 RPXXXPPPXPXXPPXXPP-XPPXPXPPPXXPPPXXP 906
RP PP P PP P PP P P P P
Sbjct: 138 RPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 6/39 (15%)
Frame = +1
Query: 799 PRPXXXPPPX-PXXPPXXPPXPP-----XPXPPPXXPPP 897
P P PPP P P PP P P PP PPP
Sbjct: 166 PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +3
Query: 786 PAXYPPPXXXXPPXXXXXXXXPXXXPPPPXPPSXXPPP 899
P+ PPP P PP PP PPP
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 5/48 (10%)
Frame = +1
Query: 778 TXXPPXIPRPXXXPPPXPXXPPXXPPXP---PXPXPP--PXXPPPXXP 906
T PP P P P P PP P P P P P PP P
Sbjct: 141 TSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +3
Query: 786 PAXYPPPXXXXPPXXXXXXXXPXXXPPPPXPPSXXPPPP 902
P+ PP PP P PPP P + PP
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +1
Query: 790 PXIPRPXXXPPPXPXXPPXXPPXPPXPXPP-PXXPPP 897
P P+ PP P PP P PP P PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP 166
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.014
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 790 PXIPRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPPP 897
P +P PP P P PP PP PP P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 32.7 bits (71), Expect = 0.074
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +1
Query: 787 PPXIPRPXXXPPPXPXXPPXXPPXPP-XPXPPPXXPPPXXP 906
PP +P PP P P PP P P PP P P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +1
Query: 790 PXIPRPXXXPPPXPXX-PPXXPPXPPXPXPPPXXPPPXXP 906
P +P P PP P PP PP P P PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Frame = +1
Query: 787 PPXIPRPXXXP---PPXPXXPPXXPPXPPXPXPPPXXP 891
PP P P P P PP P PP P P P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 30.3 bits (65), Expect = 0.39
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 787 PPXIPRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPP 894
PP P P P P P P PP P P PP
Sbjct: 424 PPSAP-PSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = +1
Query: 787 PPXIP--RPXXXPPPXPXXPPXXPPXPPXPXPPPXXPPPXXP 906
PP IP PP PP P P PP PP P
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Frame = +1
Query: 817 PPPXPXX-PPXXPPXPPXPXPPPXXPP 894
PP P PP P P PPP PP
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPP 259
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.018
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 790 PXIPRPXXXPPPXPXXPPXXPPXP-PXPXPPPXXPPPXXP 906
P +P+P PP P PP P P PP PP P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Score = 33.1 bits (72), Expect = 0.056
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 790 PXIPRPXXXPPPXPXXPPXXPPXP-PXPXPPPXXPPPXXP 906
P +P+P PP P P PP P P PP PP P
Sbjct: 1179 PPVPKPAAGVPPVP-PPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 32.7 bits (71), Expect = 0.074
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 790 PXIPRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPP 894
P +P P PP P PP PP PP P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 32.3 bits (70), Expect = 0.097
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Frame = +1
Query: 790 PXIPRPXXXPP---PXPXXPPXXPP--XPPXPXPPPXXPPPXXP 906
P +P P PP P PP PP PP P P PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +1
Query: 790 PXIPRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPP 894
P +P+P PP P PP P PP P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 30.7 bits (66), Expect = 0.30
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 790 PXIPRPXXXPPPXPXXPPXXPPXP-PXPXPPPXXPPPXXP 906
P +P+P PP P P PP P P PP P P
Sbjct: 1121 PPVPKPSVAAPPVP-VPSGAPPVPKPSVAAPPVPAPSGAP 1159
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 790 PXIPRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPPP 897
P +P+P PP P P PP P P P P
Sbjct: 1140 PPVPKPSVAAPPVP-APSGAPPVPKPSVAAPPVPAP 1174
Score = 29.9 bits (64), Expect = 0.52
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 790 PXIPRPXXXPPPXPXXPPXXPPXP-PXPXPPPXXPPPXXP 906
P +P+P PP P P PP P P PP P P
Sbjct: 1102 PPVPKPSVAVPPVP-APSGAPPVPKPSVAAPPVPVPSGAP 1140
Score = 29.9 bits (64), Expect = 0.52
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Frame = +1
Query: 790 PXIPRPXXXPPPXPXX---PPXXPPX---PPXPXPPPXXPPPXXP 906
P +P+P PP P PP P PP P P PP P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 29.5 bits (63), Expect = 0.69
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Frame = +1
Query: 790 PXIPRPXXXPP-PXPXX-PPXXPPX---PPXPXPPPXXPPPXXP 906
P IP P PP P P PP P PP P P PP P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
Frame = +1
Query: 790 PXIPRPXXXPP---PXPXXPPXXPP--XPPXPXPPPXXPPPXXP 906
P +P P PP P PP P PP P P PP P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Frame = +1
Query: 787 PPXIPRPXXXPP--PXPXXPPXXPP---XPPXPXPPPXXPPPXXP 906
PP +P P P P P P P PP P P PP P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
Frame = +1
Query: 790 PXIPRPXXXPP---PXPXXPPXXPP--XPPXPXPPPXXPPPXXP 906
P +P P PP P PP P PP P P PP P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1
Query: 790 PXIPRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPPPXXP 906
P +P+ PP P PP P PP P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP 1050
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 790 PXIPRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPPP 897
P IP P PP P PP P P PPP
Sbjct: 1032 PPIPVPSTAPPVP--IPTSTPPVPKSSSGAPSAPPP 1065
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/40 (32%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Frame = +1
Query: 790 PXIPRPXXXPP-PXPXXPPXXPPXPPXPXPPPXXPPPXXP 906
P +P P PP P P P P PP P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/40 (32%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Frame = +1
Query: 790 PXIPRPXXXPP-PXPXXPPXXPPXPPXPXPPPXXPPPXXP 906
P +P P PP P P P P PP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVP 1189
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/36 (30%), Positives = 12/36 (33%)
Frame = +1
Query: 790 PXIPRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPPP 897
P +P P PP P PP P P P
Sbjct: 1217 PPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 787 PPXIPRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPPPXXP 906
PP +P PP P P P P P P PP P
Sbjct: 522 PPMVPPGMALPPGMPAPFPGYPAVPAMPGIPGATAPPGAP 561
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 30.3 bits (65), Expect = 0.39
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -1
Query: 906 GXXGGGXXRGGXGXGGXGXXXGXXXXXGGGXXGGAGDXGRXXS 778
G G G RGG G G GGG GG G R S
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGS 178
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 29.9 bits (64), Expect = 0.52
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 441 YFCCIXVLAAKQYPCFSISLFGLTITSFL*YFF 343
Y CC + + QY F ISLF L + L + F
Sbjct: 72 YLCCGRLQMSSQYKAFLISLFALILPGVLFFIF 104
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 878 GGXGXGGXGGXXGGXXGXGGGXXXGRGIXG 789
GG G G GG G GGG GRG G
Sbjct: 112 GGGHHGPLHGPHGGFGGRGGGRMGGRGGRG 141
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/40 (30%), Positives = 14/40 (35%)
Frame = +1
Query: 787 PPXIPRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPPPXXP 906
PP +P+P P P P PPP P P
Sbjct: 368 PPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPAPAAAP 407
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 1/41 (2%)
Frame = +1
Query: 787 PPXIP-RPXXXPPPXPXXPPXXPPXPPXPXPPPXXPPPXXP 906
PP P P P P P P P P PP P P
Sbjct: 577 PPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVP 617
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 829 PXXPPXXPPXPPXPXPPPXXPPP 897
P PP P P P P PPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPP 243
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +3
Query: 819 PPXXXXXXXXPXXXPPPPXPPSXXP 893
PP P PPPP PP+ P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 12/51 (23%)
Frame = +3
Query: 786 PAXYPPPXXXXPPXXXXXXXXPXXX------------PPPPXPPSXXPPPP 902
PA PPP PP P PPPP PS P PP
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/36 (36%), Positives = 13/36 (36%), Gaps = 3/36 (8%)
Frame = +1
Query: 799 PRPXXXPPPXPXXPPXXPPXPPXP---XPPPXXPPP 897
P PPP P P P PPP PPP
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +1
Query: 787 PPXIPRPXXXPPPXPXXPPXXPPXPPXPXPP 879
PP +P P P P PP P PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 805 PXXXPPPXPXXPPXXPPXPPXPXPPPXXPP 894
P PP P P P PPP PP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -2
Query: 896 GGGXXGGGXGXGGXGGXXGGXXGXGGGXXXGRGIXGGXXV 777
GGG G G GG GG G G GG GI G V
Sbjct: 225 GGGLGGA--GLGGLGG--AGLGGFGGANNATAGIAGAAPV 260
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 906 GXXGGGXXRGGXGXGGXGXXXGXXXXXGGGXXGGAGDXG 790
G GG G G GG G G GG G G G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 805 PXXXPPPXPXXPPXXPPXPPXPXPPPXXPPPXXP 906
P PP P P P P P P P P P P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEP-PLPDEPVPEEP 134
>SPBC17G9.13c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 645 RNNKTSPSKVISEXXPSSLVVAPYLRSSLSVI 550
++NK PSK+ +S V PY+ S LS +
Sbjct: 144 QDNKIRPSKIPKSLPSNSPVRLPYISSLLSAV 175
>SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1315
Score = 25.8 bits (54), Expect = 8.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +1
Query: 412 SRQDXNTAEISTIVSQTYKHEYLQKLIEQWK 504
+ +D E+ I+ Q + EY+ +++ WK
Sbjct: 30 TERDLKLPELGDIIGQVHAPEYISQVLSGWK 60
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,063,604
Number of Sequences: 5004
Number of extensions: 61243
Number of successful extensions: 680
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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