Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_O21
         (906 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       30   0.033
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.9  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   5.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.7  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 29.9 bits (64), Expect = 0.033
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = +1

Query: 799 PRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPPPXXP 906
           P P   P   P  P    P  P   PPP  PP   P
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 27.9 bits (59), Expect = 0.13
 Identities = 13/40 (32%), Positives = 13/40 (32%)
 Frame = +1

Query: 787 PPXIPRPXXXPPPXPXXPPXXPPXPPXPXPPPXXPPPXXP 906
           P   P P   P       P  P   P P  PP  PP   P
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60



 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/36 (27%), Positives = 10/36 (27%)
 Frame = +3

Query: 786 PAXYPPPXXXXPPXXXXXXXXPXXXPPPPXPPSXXP 893
           P   P P              P   PPP  PP   P
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 859 PPXPXPPPXXPPP 897
           PP P PPP  PPP
Sbjct: 338 PPKPAPPP--PPP 348



 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +1

Query: 850 PPXPPXPXPPPXXPPP 897
           PP P  P PPP    P
Sbjct: 338 PPKPAPPPPPPSSSGP 353



 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +3

Query: 849 PXXXPPPPXPPSXXP 893
           P   PPPP P S  P
Sbjct: 339 PKPAPPPPPPSSSGP 353



 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 849 PXXXPPPPXPPSXXPP 896
           P    PPP PPS   P
Sbjct: 338 PPKPAPPPPPPSSSGP 353


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +2

Query: 158 TFLKSLKVWVREFAI-RSSAL 217
           T  K +K+W+  FAI R SA+
Sbjct: 389 TIPKEMKIWIPAFAIHRDSAI 409


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 861  PPPPXPPS 884
            PPPP PPS
Sbjct: 1356 PPPPPPPS 1363


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 512  WNFEEVGASVGYTMTLSE 565
            WN E +G  VGY ++ SE
Sbjct: 1005 WNGEILGYYVGYRLSSSE 1022


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,850
Number of Sequences: 438
Number of extensions: 7036
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)