Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_O18
         (979 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    26   0.51 
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   2.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   2.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   6.3  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   8.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   8.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   8.3  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 25.8 bits (54), Expect = 0.51
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = +3

Query: 804 PSPAXPHXTSXXGPXPXXPXPPPXPXPP 887
           P PA P         P  P  PP P PP
Sbjct: 160 PGPALPPTGFLCNNYPPLPQVPPLPLPP 187


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 87  ALVLCGLLAAVSAAPQYY 140
           A++LC  L AVSAA   Y
Sbjct: 6   AVILCAFLVAVSAAENKY 23


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 659 PPPPPPP 679
           PPPPPPP
Sbjct: 731 PPPPPPP 737



 Score = 23.8 bits (49), Expect = 2.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 895 PPPPPPP 915
           PPPPPPP
Sbjct: 731 PPPPPPP 737


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 535 PEDXXRPVAEPTETTXTNVSRXEMEFPTQST 627
           PE    P  +PT+TT +  ++   E PT+S+
Sbjct: 393 PEPVPTPEPQPTQTTESEPTQAS-EQPTESS 422


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
 Frame = +2

Query: 554 QLXSPLRXPLPM*VVXRWSSPPRAPCGXLTPX---WXXPPPPPPPXXPHXXPXPPXXP 718
           Q  +P   P P      WS+  + P   ++P    W     PPPP      P P   P
Sbjct: 292 QQATPYSAPGP--TYSTWSTV-QTPTTVMSPTINCWSLTSSPPPPYQISAQPTPSQSP 346



 Score = 22.2 bits (45), Expect = 6.3
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 744 APPPPIXXSXXPPPXXXP 797
           +PPPP   S  P P   P
Sbjct: 329 SPPPPYQISAQPTPSQSP 346


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 81  MIALVLCGLLAAVSAAPQYYHGSSHWPYHHYD 176
           MI L+    + AVSAAP  ++ S    Y H D
Sbjct: 1   MIPLIAIAGILAVSAAPAEFYESR---YDHLD 29


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 12/43 (27%), Positives = 13/43 (30%)
 Frame = +2

Query: 716 PCPXPXPXXRPSPAHXXFXLXPTXPAPXXPXPRXPPXHLPXRP 844
           P P   P    S     +   PT   P  P     P HL   P
Sbjct: 205 PYPSALPISTSSLPSDFYRFSPTGLIPPHPGLSPHPPHLSSHP 247


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 12/43 (27%), Positives = 13/43 (30%)
 Frame = +2

Query: 716 PCPXPXPXXRPSPAHXXFXLXPTXPAPXXPXPRXPPXHLPXRP 844
           P P   P    S     +   PT   P  P     P HL   P
Sbjct: 97  PYPSALPISTSSLPSDFYRFSPTGLIPPHPGLSPHPPHLSSHP 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,016
Number of Sequences: 336
Number of extensions: 4768
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27720044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)