Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_O17
(1055 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.88
04_03_0803 - 19835284-19836050,19836337-19836418 32 0.88
08_02_1084 - 24232968-24234779 31 2.0
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 2.0
10_08_0653 + 19606476-19606752,19607210-19608436,19614698-19614942 29 4.7
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 29 4.7
10_08_0286 + 16504756-16504953,16505364-16505588,16505739-165057... 29 6.2
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 6.2
08_01_0059 - 394001-394708 29 6.2
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 6.2
12_02_1069 + 25801309-25801433,25802429-25802620,25803130-258031... 29 8.2
12_01_0790 + 7216452-7216489,7216664-7216722,7217268-7218750,721... 29 8.2
07_03_1636 + 28290642-28291574 29 8.2
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 29 8.2
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 8.2
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.9 bits (69), Expect = 0.88
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 609 PPRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPPLTG-NNRSRP 740
PP L P PP PP P P G P PPL G + R P
Sbjct: 751 PPPPLMTGKKAPAPP--PPPPQAPKPPGTVPPPPPLHGASGRPHP 793
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 612 PRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPPLTGNNRSRP 740
P+ + +S P PP P C +P P P PP NRS P
Sbjct: 576 PQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVP 618
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/62 (30%), Positives = 22/62 (35%)
Frame = +1
Query: 469 HVSKRPXKGPXTXKXPRCLASFHRPPPPLXQHHKNSNASKXRXWPKPPPXXFLXIPXALS 648
+ S +P P P CL PPPP N + P PPP L L
Sbjct: 580 YASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVP-----PPPPPPPPLPNHSVLP 634
Query: 649 PP 654
PP
Sbjct: 635 PP 636
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 541 PPPPLXQHHKNSNASKXRXWPKPPPXXFLXIPXALSPP 654
PPPPL Q N +S+ P PPP +P PP
Sbjct: 571 PPPPLPQ--SNYASSQPPPPPPPPPLPNCLVPSPPPPP 606
>04_03_0803 - 19835284-19836050,19836337-19836418
Length = 282
Score = 31.9 bits (69), Expect = 0.88
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 597 VAQTPPRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPP 713
VA TPP+ + G P PP P P P PWPP
Sbjct: 104 VAATPPKVDGAGNKGEKQPKTTTPPPPP-PVPLPYPWPP 141
>08_02_1084 - 24232968-24234779
Length = 603
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = -2
Query: 712 GGQGXGXPXGRGXXGGXFXRG----GKGPXEXLKSXRGG 608
GG+G G G G GG + RG G+GP +++ GG
Sbjct: 307 GGRGGGPGGGAGGGGGNWGRGGGGMGRGPAGNMRNRMGG 345
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 609 PPRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPPLTGNNRSRP 740
PP + GP PP PP P P P PP G N S+P
Sbjct: 63 PPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQP 106
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +3
Query: 609 PPRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPPLT 719
PP NS P PP PP P P P P PP T
Sbjct: 95 PPPPYGVNSSQPPPP--PPPPPSPPPSAPPPPPPPPT 129
>10_08_0653 + 19606476-19606752,19607210-19608436,19614698-19614942
Length = 582
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 712 GGQGXGXPXGRGXXGGXFXRGGKGPXEXLKSXRGG 608
GG+G G G GG R G+G E ++ GG
Sbjct: 22 GGEGRGEVARGGEGGGEVARSGEGGGEVVRGGEGG 56
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 739 GRXRLFPVKGGQGXGXPXGRGXXGGXFXRGGKGPXEXLKSXRG 611
G R +GG+G G G GG RGG+G +S G
Sbjct: 23 GEGRGEVARGGEGGGEVARSGEGGGEVVRGGEGGGVDARSGEG 65
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +1
Query: 535 HRPPPPLXQHHKNSNASKXRXWPKPPPXXFLXIPXALSPP 654
H PPP + HH + + P PPP L L PP
Sbjct: 69 HHPPPRVQHHHHHHHQQLPAPTPPPPPPPPLP-QHRLEPP 107
>10_08_0286 +
16504756-16504953,16505364-16505588,16505739-16505794,
16505913-16506007,16506696-16506796,16507043-16507234
Length = 288
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGKGPXEXLKSXRGGV 605
+GG+G G GRG GG +GG+G K +GGV
Sbjct: 5 RGGEG-GDKGGRG--GGRGDKGGQGGSRGYKGGQGGV 38
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 29.1 bits (62), Expect = 6.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 642 PFPPLXXXPPXCPLPXGXPXPWPP 713
P PP PP PLP P P PP
Sbjct: 431 PPPPPPPPPPPPPLPPNMPPPLPP 454
>08_01_0059 - 394001-394708
Length = 235
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 606 TPPRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPPL 716
TPP P PP+ PP P P P P PL
Sbjct: 16 TPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPL 52
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +3
Query: 606 TPPRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPPLTGNNRSRP 740
TPP S P PPL PP P P P P P + N S P
Sbjct: 98 TPPPPPASISPTPAPPLP--PPPAPAPPPTPTPKFPSSSANPSPP 140
>12_02_1069 +
25801309-25801433,25802429-25802620,25803130-25803159,
25803426-25803500,25803599-25804373,25804549-25804614,
25804746-25804811,25804898-25805140,25805407-25805502
Length = 555
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 517 RCLASFH-RPPPPLXQHHKNSNASKXRXWPKPPP 615
RCLA H +PPPP+ KN + PPP
Sbjct: 511 RCLAVDHLQPPPPMLAAAKNLQQQQNTAEAPPPP 544
>12_01_0790 +
7216452-7216489,7216664-7216722,7217268-7218750,
7218828-7218892,7219023-7219080,7219152-7219262,
7219332-7219410,7219521-7219613,7219701-7219886
Length = 723
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 612 PRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPPL 716
P+ L +S GP PP+ P P P P PP+
Sbjct: 291 PKPLVASSRGPEPPVASPPVPEPPVASPPVPEPPV 325
>07_03_1636 + 28290642-28291574
Length = 310
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 514 PRCLASFHRPPPPLXQHHKNSNASKXRXWPKPPPXXFLXIPXALSPP 654
P+ + ++ PPPP Q + + S + PPP +L P SPP
Sbjct: 142 PQSVFAYPAPPPPPPQLFETAPPSPP--YVPPPPDAYLRKPSPPSPP 186
>01_06_1678 - 39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 891 PPXPXPXPPXPXXXXXXXXXXXXXXXXXXXXXPXYPXSPPPXXSXPXXIPTRHP 1052
PP P P PP P P P PPP P P HP
Sbjct: 84 PPPPPPVPPCPPNATHVVPCHEDDELSGERHCP--PRPPPPPPPHPPEDPPPHP 135
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 712 GGQGXGXPXGRGXXGGXFXRGGKG 641
GG G G GRG GG RGG G
Sbjct: 96 GGYGGGGGGGRGGGGGGGGRGGGG 119
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,061,339
Number of Sequences: 37544
Number of extensions: 394158
Number of successful extensions: 2096
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1996
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3129488528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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