Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_O17
(1055 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ384425-1|ABD48875.1| 258|Homo sapiens ras-like gene family me... 31 9.3
DQ384424-1|ABD48874.1| 258|Homo sapiens ras-like gene family me... 31 9.3
DQ384423-1|ABD48873.1| 258|Homo sapiens ras-like gene family me... 31 9.3
DQ384422-1|ABD48872.1| 258|Homo sapiens ras-like gene family me... 31 9.3
DQ384421-1|ABD48871.1| 258|Homo sapiens ras-like gene family me... 31 9.3
DQ384420-1|ABD48870.1| 258|Homo sapiens ras-like gene family me... 31 9.3
BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein. 31 9.3
BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif prote... 31 9.3
BC040076-1|AAH40076.1| 258|Homo sapiens ras homolog gene family... 31 9.3
BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein famil... 31 9.3
AY569438-1|AAS80155.1| 308|Homo sapiens hepatocellular carcinom... 31 9.3
AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif prote... 31 9.3
AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif prote... 31 9.3
AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif prote... 31 9.3
AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif prote... 31 9.3
AL096776-2|CAC00584.1| 258|Homo sapiens ras homolog gene family... 31 9.3
AK027456-1|BAB55125.1| 680|Homo sapiens protein ( Homo sapiens ... 31 9.3
AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein. 31 9.3
AF378087-1|AAK83340.1| 258|Homo sapiens Wrch-1 protein. 31 9.3
AF282258-1|AAG46058.1| 258|Homo sapiens Ryu GTPase protein. 31 9.3
AF211836-1|AAL54874.1| 258|Homo sapiens CDC42-like GTPase protein. 31 9.3
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 31 9.3
AB209511-1|BAD92748.1| 270|Homo sapiens ras homolog gene family... 31 9.3
AB074878-1|BAB86361.1| 258|Homo sapiens Rho GTPase-like protein... 31 9.3
AB051826-1|BAB18638.1| 258|Homo sapiens GTP-binding protein lik... 31 9.3
>DQ384425-1|ABD48875.1| 258|Homo sapiens ras-like gene family
member U protein.
Length = 258
Score = 30.7 bits (66), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGK 644
+GG+G G P GRG GG RG K
Sbjct: 28 RGGRGPGEPGGRGRAGGAEGRGVK 51
>DQ384424-1|ABD48874.1| 258|Homo sapiens ras-like gene family
member U protein.
Length = 258
Score = 30.7 bits (66), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGK 644
+GG+G G P GRG GG RG K
Sbjct: 28 RGGRGPGEPGGRGRAGGAEGRGVK 51
>DQ384423-1|ABD48873.1| 258|Homo sapiens ras-like gene family
member U protein.
Length = 258
Score = 30.7 bits (66), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGK 644
+GG+G G P GRG GG RG K
Sbjct: 28 RGGRGPGEPGGRGRAGGAEGRGVK 51
>DQ384422-1|ABD48872.1| 258|Homo sapiens ras-like gene family
member U protein.
Length = 258
Score = 30.7 bits (66), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGK 644
+GG+G G P GRG GG RG K
Sbjct: 28 RGGRGPGEPGGRGRAGGAEGRGVK 51
>DQ384421-1|ABD48871.1| 258|Homo sapiens ras-like gene family
member U protein.
Length = 258
Score = 30.7 bits (66), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGK 644
+GG+G G P GRG GG RG K
Sbjct: 28 RGGRGPGEPGGRGRAGGAEGRGVK 51
>DQ384420-1|ABD48870.1| 258|Homo sapiens ras-like gene family
member U protein.
Length = 258
Score = 30.7 bits (66), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGK 644
+GG+G G P GRG GG RG K
Sbjct: 28 RGGRGPGEPGGRGRAGGAEGRGVK 51
>BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein.
Length = 983
Score = 30.7 bits (66), Expect = 9.3
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +3
Query: 606 TPPRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPPLTGNNRSRP 740
TPP N P PP PP P G P P PPL + P
Sbjct: 354 TPPPV---NLRPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAP 395
>BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 30.7 bits (66), Expect = 9.3
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +3
Query: 606 TPPRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPPLTGNNRSRP 740
TPP N P PP PP P G P P PPL + P
Sbjct: 354 TPPPV---NLRPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAP 395
>BC040076-1|AAH40076.1| 258|Homo sapiens ras homolog gene family,
member U protein.
Length = 258
Score = 30.7 bits (66), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGK 644
+GG+G G P GRG GG RG K
Sbjct: 28 RGGRGPGEPGGRGRAGGAEGRGVK 51
>BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein family
A, member 1 (H/ACA small nucleolar RNPs) protein.
Length = 217
Score = 30.7 bits (66), Expect = 9.3
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 712 GGQGXGXPXGRGXXGGXFXRGGKG 641
GG+G G GRG GG F RGG+G
Sbjct: 187 GGRGGGFRGGRGGGGGGF-RGGRG 209
>AY569438-1|AAS80155.1| 308|Homo sapiens hepatocellular
carcinoma-downregulated mitochondrial carrier protein
protein.
Length = 308
Score = 30.7 bits (66), Expect = 9.3
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 579 RLQXQXVAQTPPRXLFXNSXGPFPPLXXXPPXCPLP 686
RLQ Q AQ R L + PP+ PP CP P
Sbjct: 122 RLQTQTQAQKQQRRLSASGPLAVPPMCPVPPACPEP 157
>AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 30.7 bits (66), Expect = 9.3
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +3
Query: 606 TPPRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPPLTGNNRSRP 740
TPP N P PP PP P G P P PPL + P
Sbjct: 354 TPPPV---NLRPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAP 395
>AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 30.7 bits (66), Expect = 9.3
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +3
Query: 606 TPPRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPPLTGNNRSRP 740
TPP N P PP PP P G P P PPL + P
Sbjct: 355 TPPPV---NLRPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAP 396
>AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 30.7 bits (66), Expect = 9.3
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +3
Query: 606 TPPRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPPLTGNNRSRP 740
TPP N P PP PP P G P P PPL + P
Sbjct: 354 TPPPV---NLRPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAP 395
>AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 30.7 bits (66), Expect = 9.3
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +3
Query: 606 TPPRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPPLTGNNRSRP 740
TPP N P PP PP P G P P PPL + P
Sbjct: 355 TPPPV---NLRPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAP 396
>AL096776-2|CAC00584.1| 258|Homo sapiens ras homolog gene family,
member U protein.
Length = 258
Score = 30.7 bits (66), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGK 644
+GG+G G P GRG GG RG K
Sbjct: 28 RGGRGPGEPGGRGRAGGAEGRGVK 51
>AK027456-1|BAB55125.1| 680|Homo sapiens protein ( Homo sapiens
cDNA FLJ14550 fis, clone NT2RM2001696. ).
Length = 680
Score = 30.7 bits (66), Expect = 9.3
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +3
Query: 606 TPPRXLFXNSXGPFPPLXXXPPXCPLPXGXPXPWPPLTGNNRSRP 740
TPP N P PP PP P G P P PPL + P
Sbjct: 51 TPPPV---NLRPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAP 92
>AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein.
Length = 217
Score = 30.7 bits (66), Expect = 9.3
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 712 GGQGXGXPXGRGXXGGXFXRGGKG 641
GG+G G GRG GG F RGG+G
Sbjct: 187 GGRGGGFRGGRGGGGGGF-RGGRG 209
>AF378087-1|AAK83340.1| 258|Homo sapiens Wrch-1 protein.
Length = 258
Score = 30.7 bits (66), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGK 644
+GG+G G P GRG GG RG K
Sbjct: 28 RGGRGPGEPGGRGRAGGAEGRGVK 51
>AF282258-1|AAG46058.1| 258|Homo sapiens Ryu GTPase protein.
Length = 258
Score = 30.7 bits (66), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGK 644
+GG+G G P GRG GG RG K
Sbjct: 28 RGGRGPGEPGGRGRAGGAEGRGVK 51
>AF211836-1|AAL54874.1| 258|Homo sapiens CDC42-like GTPase protein.
Length = 258
Score = 30.7 bits (66), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGK 644
+GG+G G P GRG GG RG K
Sbjct: 28 RGGRGPGEPGGRGRAGGAEGRGVK 51
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 30.7 bits (66), Expect = 9.3
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 609 PPRXLFXNSXGPFPPLXXXPPXCPLPXGXP-XPWPPLTGN 725
PP +S P PP PP PLP G P PPL+G+
Sbjct: 588 PPPPAPGDSTTPPPPPPPPPPPPPLPGGTAISPPPPLSGD 627
>AB209511-1|BAD92748.1| 270|Homo sapiens ras homolog gene family,
member U variant protein.
Length = 270
Score = 30.7 bits (66), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGK 644
+GG+G G P GRG GG RG K
Sbjct: 40 RGGRGPGEPGGRGRAGGAEGRGVK 63
>AB074878-1|BAB86361.1| 258|Homo sapiens Rho GTPase-like protein
ARHU protein.
Length = 258
Score = 30.7 bits (66), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGK 644
+GG+G G P GRG GG RG K
Sbjct: 28 RGGRGPGEPGGRGRAGGAEGRGVK 51
>AB051826-1|BAB18638.1| 258|Homo sapiens GTP-binding protein like 1
protein.
Length = 258
Score = 30.7 bits (66), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 715 KGGQGXGXPXGRGXXGGXFXRGGK 644
+GG+G G P GRG GG RG K
Sbjct: 28 RGGRGPGEPGGRGRAGGAEGRGVK 51
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,551,713
Number of Sequences: 237096
Number of extensions: 1994520
Number of successful extensions: 12336
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 8248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11792
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14373664760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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