Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_O14
         (1001 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    25   0.70 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   6.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   6.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   8.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   8.6  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 662 PXPPXPXPPACPP 700
           P  P P PP CPP
Sbjct: 23  PHSPEPYPPRCPP 35


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/34 (35%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
 Frame = +1

Query: 895 HXIPPPSHXTXXPLSPSXPXGPXXTPXPSP-CXP 993
           H    P H    P +     GP  TP  SP C P
Sbjct: 361 HSHAHPMHHDMLPETMHMGMGPSLTPLASPGCGP 394


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/34 (35%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
 Frame = +1

Query: 895 HXIPPPSHXTXXPLSPSXPXGPXXTPXPSP-CXP 993
           H    P H    P +     GP  TP  SP C P
Sbjct: 361 HSHAHPMHHDMLPETMHMGMGPSLTPLASPGCGP 394


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 874  PPTSPGRHXIPPPSHXTXXPL 936
            PP+      +PPP H T   L
Sbjct: 1796 PPSVHSSTVVPPPQHSTTQSL 1816


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 668 PPXPXPPACPP 700
           PP P PP  PP
Sbjct: 181 PPLPLPPIFPP 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,166
Number of Sequences: 336
Number of extensions: 2812
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28547508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)